Factsheet for GSMUA_Achr1P21510_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	62.64	89.87
GSMUA_Achr10P...	Banana	mitochondrion	60.97	86.77
GSMUA_Achr7P12720_001	Banana	cytosol	78.07	81.08
Os08t0484500-01	Rice	plastid	74.35	79.21
GSMUA_AchrUn_...	Banana	cytosol	25.84	78.53
Bra016381.1-P	Field mustard	plastid	74.54	77.56
CDY68560	Canola	plastid	74.54	77.56
CDY41485	Canola	plastid	74.54	77.56
EES14335	Sorghum	plastid	73.23	77.56
CDY04818	Canola	plastid	74.54	77.41
CDY21361	Canola	plastid	74.35	77.22
Bra031389.1-P	Field mustard	plastid	74.35	77.22
CDX87459	Canola	plastid	73.05	75.87
AT1G22410.1	Thale cress	plastid	74.16	75.71
CDX88433	Canola	plastid	73.23	75.62
Solyc01g105390.2.1	Tomato	cytosol	23.79	67.37
Zm00001d052797_P002	Maize	extracellular	60.04	63.83
Bra035024.1-P	Field mustard	cytosol	72.12	52.29
GSMUA_Achr4P28940_001	Banana	cytosol, mitochondrion, plastid	2.79	3.99

Protein Annotations

KEGG:00400+2.5.1.54	Gene3D:3.20.20.70	MapMan:4.1.5.1.1	InterPro:Aldolase_TIM	InterPro:DAHP_synth_2	GO:GO:0003674
GO:GO:0003824	GO:GO:0003849	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009073	GO:GO:0009423
GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	EnsemblPlantsGene:GSMUA_Achr1G21510_001	EnsemblPlants:GSMUA_Achr1P21510_001
EnsemblPlants:GSMUA_Achr1T21510_001	InterPro:IPR013785	UniProt:M0S1V9	PFAM:PF01474	PANTHER:PTHR21337	PANTHER:PTHR21337:SF16
SUPFAM:SSF51569	TIGRFAMs:TIGR01358	UniParc:UPI000296B24B	SEG:seg	:	:

Description

Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr1G21510_001]

Coordinates

chr1:-:16175785..16177815

Molecular Weight (calculated)

59699.5 Da

IEP (calculated)

9.502

GRAVY (calculated)

-0.387

Length

538 amino acids

Sequence
(BLAST)

001: MATLSPATNL LHRLSSSSVL SATERGNRQP GLASFLPKTC RIRPRRSISS VHAAEPAKTP VVTNKPKKLD TAPAPSTKWA VDSWKAKKAL QLPEYPVEKE
101: LSEVLRTIES FPPIVFAGEA RHLEERLADA AVGRAFLLQG GDCAESFKEF NANNIRDTFR VLLQMGAVLM FGGQMPVVRV GRMAGQFAKP RSEPLEERDG
201: VKLPSYRGDN VNGDAFDAKS RVPDPQRMIR AYTQSAATLN LLRAFATGGY AAMQRVTQWN LDFTEHSEQG DRRELAHRVD DALGFMAAAG LTMDHPIMTT
301: TEFWTSHECL LLPYEQALTR QDSTSGLYYD CSAHFLWVGE RTRQLDGAHV EFLRGVANPL GIKVSDKMNP KELVKLTEIL NPHNKPGRIT VIARMGAENM
401: RVKLPHLIRA VRSAGQIVTW VSDPMHGNTI KAPCGLKTRP FDAIRAELRA FFDVHEQEGS HPGGVHLEMT GQNVTECIGG SRAVTFDDLS SRYHTHCDPR
501: LNASQSLELA FIIAERLRKR RIQSLHRTGP SSSPPEPF

Best Arabidopsis Sequence Match ( AT4G33510.1 )
(BLAST)

001: MVTLNASSPL TTKSFLPYRH APRRPISFSP VFAVHSTDPK KSTQSASASV KWSLESWKSK KALQLPDYPD QKDVDSVLQT LSSFPPIVFA GEARKLEDKL
101: GQAAMGQAFM LQGGDCAESF KEFNANNIRD TFRVLLQMGV VLMFGGQLPV IKVGRMAGQF AKPRSDPFEE KDGVKLPSYR GDNINGDAFD EKSRIPDPHR
201: MVRAYTQSVA TLNLLRAFAT GGYAAMQRVS QWNLDFTQHS EQGDRYRELA NRVDEALGFM GAAGLTSAHP IMTTTEFWTS HECLLLPYEQ ALTREDSTSG
301: LYYDCSAHML WVGERTRQLD GAHVEFLRGI ANPLGIKVSD KMVPSELVKL IEILNPQNKP GRITVIVRMG AENMRVKLPN LIRAVRGAGQ IVTWVSDPMH
401: GNTIMAPGGL KTRSFDAIRA ELRAFFDVHD QEGSFPGGVH LEMTGQNVTE CVGGSRTITY NDLSSRYHTH CDPRLNASQS LELAFIIAER LRKRRLGSGN
501: LPSSIGV

Arabidopsis Description

DHS2Phospho-2-dehydro-3-deoxyheptonate aldolase [Source:UniProtKB/TrEMBL;Acc:A0A178US70]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.