Factsheet for GSMUA_Achr10P24720_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	mitochondrion	90.67	89.95
Solyc01g105390.2.1	Tomato	cytosol	35.2	69.47
GSMUA_Achr7P12720_001	Banana	cytosol	95.2	68.92
Bra031389.1-P	Field mustard	plastid	89.07	64.48
CDY04818	Canola	plastid	89.07	64.48
CDY21361	Canola	plastid	89.07	64.48
Bra016381.1-P	Field mustard	plastid	88.8	64.41
CDY41485	Canola	plastid	88.8	64.41
CDY68560	Canola	plastid	88.53	64.22
AT1G22410.1	Thale cress	plastid	89.07	63.38
CDX87459	Canola	plastid	87.47	63.32
CDX88433	Canola	plastid	87.47	62.96
GSMUA_Achr1P21510_001	Banana	plastid	89.87	62.64
GSMUA_AchrUn_...	Banana	cytosol	28.53	60.45
Bra035024.1-P	Field mustard	cytosol	87.2	44.07
GSMUA_Achr4P28940_001	Banana	cytosol, mitochondrion, plastid	4.53	4.52

Protein Annotations

KEGG:00400+2.5.1.54	Gene3D:3.20.20.70	MapMan:4.1.5.1.1	InterPro:Aldolase_TIM	InterPro:DAHP_synth_2	GO:GO:0003674
GO:GO:0003824	GO:GO:0003849	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009073	GO:GO:0009423
GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	EnsemblPlantsGene:GSMUA_Achr10G24720_001	EnsemblPlants:GSMUA_Achr10P24720_001
EnsemblPlants:GSMUA_Achr10T24720_001	InterPro:IPR013785	UniProt:M0RL47	PFAM:PF01474	PANTHER:PTHR21337	PANTHER:PTHR21337:SF16
SUPFAM:SSF51569	TIGRFAMs:TIGR01358	UniParc:UPI00029576CD	:	:	:

Description

Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr10G24720_001]

Coordinates

chr10:-:29031502..29034820

Molecular Weight (calculated)

41745.1 Da

IEP (calculated)

7.388

GRAVY (calculated)

-0.321

Length

375 amino acids

Sequence
(BLAST)

001: MGAVLMFGGQ MPVVKVGRMA GQFAKPRSDP FEEKDGVKLP SYRGDNINGD AFDEKSRIPD PQRMIRAYCQ AAATLNLLRA FATGGYAAMQ RVTQWNLDFT
101: EHSEQGDRYQ ELAHRVDEAL GFMAAAGLTM DHPIMTTTEF WTSHECLLLP YEQSLTREDS TSGLYYDCSA HFLWVGERTR QLDGAHVEFL RGVANPLGIK
201: VSDKMDPKEL VKLIEILNPQ NKPGRITIIA RMGADKMRVK LPHLIRAVRG AGQIVTWVSD PMHGNTIKAP CGLKTRPFDS ILAEVRAFFD VHEQEGSHPG
301: GVHLEMTGQN VTECIGGSRT VTFDDLSSRY HTHCDPRLNA SQSLELAFII AERLRKRRIA STSFGQLNSL PTLGL

Best Arabidopsis Sequence Match ( AT1G22410.1 )
(BLAST)

001: MALMNGSMNL SSVKSSMINH RQPNFSSAVS RPTSFRISAV QTDPKTPAAS SASAATTTPA TLTKPVGVNV GKGKWAPESW RTKKALQQPD YPDLAALEAV
101: LETIEAFPPI VFAGEARLLE ERLGQAAMGE AFLLQGGDCA ESFKEFNANN IRDTFRILLQ MGAVLMFGGQ VPVVKVGRMA GQFAKPRSDS FEEKDGVKLP
201: SYRGDNINGD AFDSKSRIPD PQRMIRAYCQ SAATLNLLRA FATGGYAAMQ RVTQWNLDFT ERSEQGDRYR ELANRVDEAL GFMHAAGLTL DHPIMQTTDF
301: WTSHECLLLP YEQSLTRLDS TSGLYYDCSA HMIWVGERTR QLDGAHVEFL RGVANPLGIK VSDKMDPKEL VKLIEILNAD NKPGRITIIT RMGAENMRVK
401: LPHLIREVRR AGQIVTWVSD PMHGNTIKAP CGLKTRPFDA ILAEVRAFFD VHEQEGSHPG GIHLEMTGQN VTECIGGSRT VTFDDLGSRY HTHCDPRLNA
501: SQSLELSFII AERLRKRRIK SQKAFAL

Arabidopsis Description

Phospho-2-dehydro-3-deoxyheptonate aldolase [Source:UniProtKB/TrEMBL;Acc:Q9SK84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.