CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69114	Canola	plastid	95.45	95.25
AT4G39980.1	Thale cress	plastid	90.27	83.05
PGSC0003DMT400041818	Potato	plastid	77.23	72.99
Solyc11g009080.1.1	Tomato	plastid	76.4	72.21
VIT_00s0391g00070.t01	Wine grape	plastid	78.26	71.05
PGSC0003DMT400041816	Potato	plastid	73.29	70.8
CDX87459	Canola	plastid	75.16	70.08
CDX88433	Canola	plastid	75.36	69.87
CDY68560	Canola	plastid	74.74	69.83
CDY21361	Canola	plastid	74.74	69.69
CDY41485	Canola	plastid	74.53	69.63
CDY04818	Canola	plastid	74.53	69.5
KRH16768	Soybean	endoplasmic reticulum, plastid	72.88	69.16
CDX68985	Canola	plastid	72.46	68.9
KRH72380	Soybean	endoplasmic reticulum	75.36	68.42
CDX75362	Canola	plastid	71.22	67.72
KRH53034	Soybean	plastid	69.77	65.31
GSMUA_AchrUn_...	Banana	cytosol	22.15	60.45

Protein Annotations

KEGG:00400+2.5.1.54	Gene3D:3.20.20.70	MapMan:4.1.5.1.1	GO:A0A078BX32	InterPro:Aldolase_TIM	EnsemblPlants:CDX69370
ProteinID:CDX69370	ProteinID:CDX69370.1	InterPro:DAHP_synth_2	GO:GO:0003674	GO:GO:0003824	GO:GO:0003849
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009073	GO:GO:0009987	GO:GO:0016740
EnsemblPlantsGene:GSBRNA2T00131222001	InterPro:IPR013785	PFAM:PF01474	PANTHER:PTHR21337	PANTHER:PTHR21337:SF16	MetaCyc:PWY-6164
SUPFAM:SSF51569	UniPathway:UPA00053	UniParc:UPI0004EDD653	SEG:seg	:	:

Description

BnaC01g00830D

Coordinates

chrLK031789:-:4405197..4407428

Molecular Weight (calculated)

53347.7 Da

IEP (calculated)

7.804

GRAVY (calculated)

-0.247

Length

483 amino acids

Sequence
(BLAST)

001: MALSNAASSS SLSTRSLYTG LSHRHSNRQS SLPFHRSVNL VTALHAADPS RNAAVSVKES VSAALKWTPE SWKLKKALQL PDYPDAAELD SVLKTIEAFP
101: PIVFAGEARN LEERLADAAV GKAFLLQGGD CAESFKEFNA TNIRDTFRVL LQMSIVLTFG GQVPIVKVGR MAGQFAKPRS DPFEEKDGSA ATLNLLRAFA
201: TGGYAAIQRV TQWNLDFVEQ SEQADRYQEL ANRVDEALGF MSACGLTTDH PLMTTTDFYT SHECLLLPYE QSLTRLDSTS GLYYDCSAHM VWCGERTRQL
301: DGAHVEFLRG IANPLGIKVS NKMDPNELVK LVEILNPNNK PGRITVIVRM GAENMRVKLP HLIRAVRRSG QIVTWVCDPM HGNTIKAPCG LKTRAFDSIL
401: AEVRAFLDVH EQEGSHAGGI HLEMTGQNVT ECIGGSRTVT YDDLSSRYHT HCDPRLNASQ SLELAFIVAE RLRKRRTATQ RLS

Best Arabidopsis Sequence Match ( AT4G39980.1 )
(BLAST)

001: MALSNASSLS TRSIYGGDLS HRPSNRQSSF TFHPAVNTKP KSVNLVTAVH AAEPARNAVS VKESVASSSS GALKWTPESW KLKKALQLPD YPNANELESV
101: LKTIEAFPPI VFAGEARNLE ERLADAAVGK AFLLQGGDCA ESFKEFNATN IRDTFRVLLQ MSIVLTFGGQ VPVIKVGRMA GQFAKPRSDA FEEKDGVKLP
201: SYKGDNINGD TFDEKSRIPD PNRMIRAYTQ SAATLNLLRA FATGGYAAIQ RVTQWNLDFV EQSEQADRYQ ELANRVDEAL GFMSACGLGT DHPLMTTTDF
301: YTSHECLLLP YEQSLTRLDS TSGLYYDCSA HMVWCGERTR QLDGAHVEFL RGIANPLGIK VSNKMDPFEL VKLVEILNPN NKPGRITVIV RMGAENMRVK
401: LPHLIRAVRR SGQIVTWVCD PMHGNTIKAP CGLKTRAFDS ILAEVRAFLD VHEQEGSHAG GIHLEMTGQN VTECIGGSRT VTYDDLSSRY HTHCDPRLNA
501: SQSLELAFIV AERLRKRRTG SQRVS

Arabidopsis Description

DHS1Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P29976]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.