Factsheet for VIT_00s0391g00070.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH16768	Soybean	endoplasmic reticulum, plastid	78.95	82.51
Solyc11g009080.1.1	Tomato	plastid	78.57	81.8
PGSC0003DMT400041818	Potato	plastid	78.38	81.6
GSMUA_AchrUn_...	Banana	cytosol	27.07	81.36
KRH72380	Soybean	endoplasmic reticulum	81.2	81.2
PGSC0003DMT400041816	Potato	plastid	74.81	79.6
VIT_18s0001g06250.t01	Wine grape	plastid	81.95	79.56
AT4G39980.1	Thale cress	plastid	77.82	78.86
Bra011819.1-P	Field mustard	plastid	76.69	78.76
CDX69370	Canola	plastid	71.05	78.26
CDY69114	Canola	plastid	70.86	77.89
VIT_00s1217g00010.t01	Wine grape	plastid	71.05	75.0
KRH53034	Soybean	plastid	72.37	74.61
VIT_00s0591g00020.t01	Wine grape	plastid	15.79	55.63

Protein Annotations

KEGG:00400+2.5.1.54	EntrezGene:100258475	wikigene:100258475	Gene3D:3.20.20.70	MapMan:4.1.5.1.1	ProteinID:ACM45080
ProteinID:ACM45080.1	InterPro:Aldolase_TIM	ProteinID:CCB52555	ProteinID:CCB52555.1	ncoils:Coil	InterPro:DAHP_synth_2
UniProt:F6HJL1	EMBL:FJ604856	EMBL:FN595782	GO:GO:0003674	GO:GO:0003824	GO:GO:0003849
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009073	GO:GO:0009423
GO:GO:0009507	GO:GO:0009536	GO:GO:0009611	GO:GO:0009987	GO:GO:0016740	InterPro:IPR013785
EntrezGene:LOC100258475	wikigene:LOC100258475	PFAM:PF01474	PANTHER:PTHR21337	PANTHER:PTHR21337:SF16	SUPFAM:SSF51569
TIGR:TC57386	TIGR:TC57642	TIGRFAMs:TIGR01358	UniParc:UPI00021090D5	ArrayExpress:VIT_00s0391g00070	EnsemblPlantsGene:VIT_00s0391g00070
EnsemblPlants:VIT_00s0391g00070.t01	unigene:Vvi.1311	SEG:seg	:	:	:

Description

Phospho-2-dehydro-3-deoxyheptonate aldolase [Source:UniProtKB/TrEMBL;Acc:F6HJL1]

Coordinates

chrUn:+:27181313..27185595

Molecular Weight (calculated)

58659.3 Da

IEP (calculated)

8.025

GRAVY (calculated)

-0.302

Length

532 amino acids

Sequence
(BLAST)

001: MALSNASTLS SKSVHQTHSL FSSLSHQPSS SLVPGKTHLR SLHPISAVHA AEPAKNPVVV DKPPKTSSPS VPAGSGKWTV DSWKTKKALQ LPEYPNESEL
101: ESVLQTLEAF PPIVFAGEAR SLEERLGDAA MGNAFLLQGG DCAESFKEFS ANNIRDTFRI ILQMGAVLMF GGQVPVIKVG RMAGQFAKPR SDPFEEKNGV
201: KLPSYKGDNI NGDAFNEKSR IPDPQRMIRA YCQAAATLNL LRAFATGGYA AMQRVTQWNL DFAEHSEQGD RYQELAHRVD EALGFMSAAG LTVDHPIMTT
301: TEFWTSHECL LLPYEQSLTR KDSTSGLYYD CSAHMLWVGE RTRQLDGAHV EFLRGVANPL GIKVSNKMDP NELVKLVEIL NPHNKPGRIT VICRMGAENM
401: RVKLPHLIRA VRQAGQIVTW VCDPMHGNTI KAPCGLKTRP FDAILAEVRA FFDVHEQEGS HPGGVHLEMT GQNVTECIGG SRTVTFDDLS SRYHTHCDPR
501: LNASQSLELA FIIAERLRKR RMGTQRLLAL GL

Best Arabidopsis Sequence Match ( AT4G39980.1 )
(BLAST)

001: MALSNASSLS TRSIYGGDLS HRPSNRQSSF TFHPAVNTKP KSVNLVTAVH AAEPARNAVS VKESVASSSS GALKWTPESW KLKKALQLPD YPNANELESV
101: LKTIEAFPPI VFAGEARNLE ERLADAAVGK AFLLQGGDCA ESFKEFNATN IRDTFRVLLQ MSIVLTFGGQ VPVIKVGRMA GQFAKPRSDA FEEKDGVKLP
201: SYKGDNINGD TFDEKSRIPD PNRMIRAYTQ SAATLNLLRA FATGGYAAIQ RVTQWNLDFV EQSEQADRYQ ELANRVDEAL GFMSACGLGT DHPLMTTTDF
301: YTSHECLLLP YEQSLTRLDS TSGLYYDCSA HMVWCGERTR QLDGAHVEFL RGIANPLGIK VSNKMDPFEL VKLVEILNPN NKPGRITVIV RMGAENMRVK
401: LPHLIRAVRR SGQIVTWVCD PMHGNTIKAP CGLKTRAFDS ILAEVRAFLD VHEQEGSHAG GIHLEMTGQN VTECIGGSRT VTYDDLSSRY HTHCDPRLNA
501: SQSLELAFIV AERLRKRRTG SQRVS

Arabidopsis Description

DHS1Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P29976]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.