Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011819.1-P | Field mustard | plastid | 89.52 | 90.73 |
| CDX69370 | Canola | plastid | 83.05 | 90.27 |
| CDY69114 | Canola | plastid | 82.86 | 89.88 |
| PGSC0003DMT400041818 | Potato | plastid | 76.76 | 78.86 |
| Solyc11g009080.1.1 | Tomato | plastid | 76.38 | 78.47 |
| PGSC0003DMT400041816 | Potato | plastid | 74.29 | 78.0 |
| VIT_00s0391g00070.t01 | Wine grape | plastid | 78.86 | 77.82 |
| KRH16768 | Soybean | endoplasmic reticulum, plastid | 74.29 | 76.62 |
| AT4G33510.1 | Thale cress | plastid | 73.33 | 75.94 |
| GSMUA_AchrUn_... | Banana | cytosol | 25.52 | 75.71 |
| KRH72380 | Soybean | endoplasmic reticulum | 76.57 | 75.56 |
| AT1G22410.1 | Thale cress | plastid | 74.29 | 74.0 |
| KRH53034 | Soybean | plastid | 69.14 | 70.35 |
Protein Annotations
| KEGG:00400+2.5.1.54 | Gene3D:3.20.20.70 | MapMan:4.1.5.1.1 | EntrezGene:830159 | ProteinID:AEE87148.1 | ArrayExpress:AT4G39980 |
| EnsemblPlantsGene:AT4G39980 | RefSeq:AT4G39980 | TAIR:AT4G39980 | RefSeq:AT4G39980-TAIR-G | EnsemblPlants:AT4G39980.1 | TAIR:AT4G39980.1 |
| EMBL:AY090349 | EMBL:AY140052 | InterPro:Aldolase_TIM | Unigene:At.23161 | EMBL:BT000821 | ProteinID:CAB38911.1 |
| ProteinID:CAB80661.1 | InterPro:DAHP_synth_2 | Symbol:DHS1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003849 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008652 | GO:GO:0009058 |
| GO:GO:0009073 | GO:GO:0009423 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009611 | GO:GO:0009987 |
| GO:GO:0016740 | InterPro:IPR013785 | EMBL:M74819 | RefSeq:NP_195708.1 | UniProt:P29976 | PFAM:PF01474 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR21337 | PANTHER:PTHR21337:SF16 | SUPFAM:SSF51569 |
| TIGRFAMs:TIGR01358 | UniParc:UPI000000115A | SEG:seg | : | : | : |
Description
DHS1Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P29976]
Coordinates
chr4:+:18539511..18542122
Molecular Weight (calculated)
57982.1 Da
IEP (calculated)
8.164
GRAVY (calculated)
-0.312
Length
525 amino acids
Sequence
(BLAST)
(BLAST)
001: MALSNASSLS TRSIYGGDLS HRPSNRQSSF TFHPAVNTKP KSVNLVTAVH AAEPARNAVS VKESVASSSS GALKWTPESW KLKKALQLPD YPNANELESV
101: LKTIEAFPPI VFAGEARNLE ERLADAAVGK AFLLQGGDCA ESFKEFNATN IRDTFRVLLQ MSIVLTFGGQ VPVIKVGRMA GQFAKPRSDA FEEKDGVKLP
201: SYKGDNINGD TFDEKSRIPD PNRMIRAYTQ SAATLNLLRA FATGGYAAIQ RVTQWNLDFV EQSEQADRYQ ELANRVDEAL GFMSACGLGT DHPLMTTTDF
301: YTSHECLLLP YEQSLTRLDS TSGLYYDCSA HMVWCGERTR QLDGAHVEFL RGIANPLGIK VSNKMDPFEL VKLVEILNPN NKPGRITVIV RMGAENMRVK
401: LPHLIRAVRR SGQIVTWVCD PMHGNTIKAP CGLKTRAFDS ILAEVRAFLD VHEQEGSHAG GIHLEMTGQN VTECIGGSRT VTYDDLSSRY HTHCDPRLNA
501: SQSLELAFIV AERLRKRRTG SQRVS
101: LKTIEAFPPI VFAGEARNLE ERLADAAVGK AFLLQGGDCA ESFKEFNATN IRDTFRVLLQ MSIVLTFGGQ VPVIKVGRMA GQFAKPRSDA FEEKDGVKLP
201: SYKGDNINGD TFDEKSRIPD PNRMIRAYTQ SAATLNLLRA FATGGYAAIQ RVTQWNLDFV EQSEQADRYQ ELANRVDEAL GFMSACGLGT DHPLMTTTDF
301: YTSHECLLLP YEQSLTRLDS TSGLYYDCSA HMVWCGERTR QLDGAHVEFL RGIANPLGIK VSNKMDPFEL VKLVEILNPN NKPGRITVIV RMGAENMRVK
401: LPHLIRAVRR SGQIVTWVCD PMHGNTIKAP CGLKTRAFDS ILAEVRAFLD VHEQEGSHAG GIHLEMTGQN VTECIGGSRT VTYDDLSSRY HTHCDPRLNA
501: SQSLELAFIV AERLRKRRTG SQRVS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.