Factsheet for TraesCS1B01G229700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G218300.1	Wheat	plastid	96.88	96.88
HORVU1Hr1G055370.1	Barley	plastid	88.3	88.3
GSMUA_Achr4P28940_001	Banana	cytosol, mitochondrion, plastid	60.43	82.45
Os10t0564400-01	Rice	plastid	81.48	82.28
HORVU0Hr1G000490.1	Barley	cytosol	82.65	80.76
EER91915	Sorghum	plastid	78.36	80.56
KRH10562	Soybean	nucleus, plastid	67.64	70.1
Bra016381.1-P	Field mustard	plastid	14.04	13.93
CDY41485	Canola	plastid	14.04	13.93
AT1G22410.1	Thale cress	plastid	14.23	13.85
TraesCS2B01G189300.1	Wheat	plastid	14.43	13.78
CDY68560	Canola	plastid	13.84	13.73
CDY21361	Canola	plastid	13.84	13.71
CDY04818	Canola	plastid	13.84	13.71
Bra031389.1-P	Field mustard	plastid	13.84	13.71
CDX88433	Canola	plastid	13.65	13.44
CDX87459	Canola	plastid	13.45	13.32
Bra035024.1-P	Field mustard	cytosol	12.67	8.76
Zm00001d031139_P001	Maize	plastid	3.51	8.18

Protein Annotations

EnsemblPlants:TraesCS1B01G229700.1	EnsemblPlantsGene:TraesCS1B01G229700	Gene3D:3.20.20.70	GO:GO:0003674	GO:GO:0003824	GO:GO:0003849
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009073	GO:GO:0009987	GO:GO:0016740
InterPro:Aldolase_TIM	InterPro:DAHP_synth_2	InterPro:IPR013785	KEGG:00400+2.5.1.54	PANTHER:PTHR21337	PANTHER:PTHR21337:SF17
PFAM:PF01474	SEG:seg	SUPFAM:SSF51569	TIGRFAMs:TIGR01358	MapMan:4.1.5.1.1	:

Description

No Description!

Coordinates

chr1B:-:412254995..412258399

Molecular Weight (calculated)

56619.4 Da

IEP (calculated)

8.650

GRAVY (calculated)

-0.358

Length

513 amino acids

Sequence
(BLAST)

001: MAAPVLPVAP LAPSHLSPFI SARRRSSSAS SDPPRRRGTG PSVRASSSAA AAVTSGWAPD SWRARPARQI PKYPDAAALG EAERTLASFP PLVFAGETRT
101: LEERLGEAAM GRAFLLQGGD CAESFKEFGA NNIRDTFRLM LQMAVVLTFG GQMPIVKVGR MAGQFAKPRS NPIETRDGVT LPSYQGDIIN NDDFDEKSRA
201: PNPQRLIRAY SQSASTLNLL RAFAHGGYAD LQRVTEWNLD FLRHSTQGDR YGELAQRVHD AIGFMLAAGL PPQHPMMTTA EFWTSHECLH LPYEQALTRE
301: DSTSGLYYDC SAHMLWVGER TRQLDGAHVE FLRGISNPVG IKVSDKLDSS ELVKLCEILN PHNKPGRLTL ITRMGAENMR AKLPHMIRAV RQAGLIVTWV
401: SDPMHGNTIS APCGLKTRSF DAIRAELRAF FDVHEQEGSY PGGVHLEMTG QNVTECIGGS NTVTFDDLSS RYRTHCDPRL NASQSLELAF AIAERLRKKR
501: DRTWTSLIYK VEA

Best Arabidopsis Sequence Match ( AT4G33510.1 )
(BLAST)

001: MVTLNASSPL TTKSFLPYRH APRRPISFSP VFAVHSTDPK KSTQSASASV KWSLESWKSK KALQLPDYPD QKDVDSVLQT LSSFPPIVFA GEARKLEDKL
101: GQAAMGQAFM LQGGDCAESF KEFNANNIRD TFRVLLQMGV VLMFGGQLPV IKVGRMAGQF AKPRSDPFEE KDGVKLPSYR GDNINGDAFD EKSRIPDPHR
201: MVRAYTQSVA TLNLLRAFAT GGYAAMQRVS QWNLDFTQHS EQGDRYRELA NRVDEALGFM GAAGLTSAHP IMTTTEFWTS HECLLLPYEQ ALTREDSTSG
301: LYYDCSAHML WVGERTRQLD GAHVEFLRGI ANPLGIKVSD KMVPSELVKL IEILNPQNKP GRITVIVRMG AENMRVKLPN LIRAVRGAGQ IVTWVSDPMH
401: GNTIMAPGGL KTRSFDAIRA ELRAFFDVHD QEGSFPGGVH LEMTGQNVTE CVGGSRTITY NDLSSRYHTH CDPRLNASQS LELAFIIAER LRKRRLGSGN
501: LPSSIGV

Arabidopsis Description

DHS2Phospho-2-dehydro-3-deoxyheptonate aldolase [Source:UniProtKB/TrEMBL;Acc:A0A178US70]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.