CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0389700-01	Rice	plastid	81.85	81.26
EER99720	Sorghum	plastid	79.31	80.93
EES14335	Sorghum	plastid	73.32	79.53
Bra031389.1-P	Field mustard	plastid	73.32	77.99
CDY21361	Canola	plastid	73.32	77.99
CDY04818	Canola	plastid	73.14	77.8
Zm00001d029391_P002	Maize	plastid	77.5	77.64
Bra016381.1-P	Field mustard	plastid	72.78	77.56
CDY41485	Canola	plastid	72.78	77.56
CDY68560	Canola	plastid	72.41	77.18
AT1G22410.1	Thale cress	plastid	73.32	76.66
CDX87459	Canola	plastid	70.96	75.48
CDX88433	Canola	plastid	71.14	75.24
Solyc01g105390.2.1	Tomato	cytosol	22.87	66.32
Bra035024.1-P	Field mustard	cytosol	69.69	51.75
EER91915	Sorghum	plastid	12.89	14.23

Protein Annotations

KEGG:00400+2.5.1.54	Gene3D:3.20.20.70	MapMan:4.1.5.1.1	EntrezGene:8077116	InterPro:Aldolase_TIM	UniProt:C5WXQ3
InterPro:DAHP_synth_2	EnsemblPlants:EER94760	ProteinID:EER94760	ProteinID:EER94760.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0003849	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009073	GO:GO:0009423	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	InterPro:IPR013785	PFAM:PF01474	PANTHER:PTHR21337
PANTHER:PTHR21337:SF18	MetaCyc:PWY-6164	EnsemblPlantsGene:SORBI_3001G351000	SUPFAM:SSF51569	unigene:Sbi.812	TIGRFAMs:TIGR01358
UniParc:UPI0001A832F1	RefSeq:XP_002467762.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:64057265..64062104

Molecular Weight (calculated)

60340.1 Da

IEP (calculated)

8.975

GRAVY (calculated)

-0.287

Length

551 amino acids

Sequence
(BLAST)

001: MALSTNAAAA AAAISGGSAS ASQPARRTPS SLLPLTRRRR AVVRAVHAAE PSKNPGVVVP AAAKASSPTT VAPENDAAPA PAPARAPAKW AVDSWRTKKA
101: LQLPEYPNPA ELEAVLKTIE AFPPIVFAGE ARHLEERLAD AAMGRAFLLQ GGDCAESFKE FNSNNIRDTF RVLLQMSAVL MFGAQMPVVK VGRMAGQFAK
201: PRSDPFEVRD GVKLPSYRGD NINGEAFDEK SRVPDPQRMI RAYAQSAATL NLLRAFATGG YAAMQRVTQW NLDFTEHSEQ GDRYRELAHR VDEALGFMSA
301: AGLTPDHPLT TTTEFWTSHE CLLLPYEQAL TRQDSTSGLF YDCSAHMLWV GERTRQLDGA HVEFLRGIAN PLGIKVSDKM NPSDLVKLID ILNPTNKPGR
401: ITVITRMGAE NMRVKLPHLI RAVRQAGQIV TWITDPMHGN TIKAPCGLKT RPFDNILAEV RAFFDVHEQE GSHPGGVHLE MTGQNVTECI GGSRTVTFDD
501: LSDRYHTHCD PRLNASQSLE LAFIIAERLR KRRIRSSSGL NNILPLPPFG F

Best Arabidopsis Sequence Match ( AT1G22410.1 )
(BLAST)

001: MALMNGSMNL SSVKSSMINH RQPNFSSAVS RPTSFRISAV QTDPKTPAAS SASAATTTPA TLTKPVGVNV GKGKWAPESW RTKKALQQPD YPDLAALEAV
101: LETIEAFPPI VFAGEARLLE ERLGQAAMGE AFLLQGGDCA ESFKEFNANN IRDTFRILLQ MGAVLMFGGQ VPVVKVGRMA GQFAKPRSDS FEEKDGVKLP
201: SYRGDNINGD AFDSKSRIPD PQRMIRAYCQ SAATLNLLRA FATGGYAAMQ RVTQWNLDFT ERSEQGDRYR ELANRVDEAL GFMHAAGLTL DHPIMQTTDF
301: WTSHECLLLP YEQSLTRLDS TSGLYYDCSA HMIWVGERTR QLDGAHVEFL RGVANPLGIK VSDKMDPKEL VKLIEILNAD NKPGRITIIT RMGAENMRVK
401: LPHLIREVRR AGQIVTWVSD PMHGNTIKAP CGLKTRPFDA ILAEVRAFFD VHEQEGSHPG GIHLEMTGQN VTECIGGSRT VTFDDLGSRY HTHCDPRLNA
501: SQSLELSFII AERLRKRRIK SQKAFAL

Arabidopsis Description

Phospho-2-dehydro-3-deoxyheptonate aldolase [Source:UniProtKB/TrEMBL;Acc:Q9SK84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.