CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 10

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d022181_P004	Maize	plastid	96.67	97.03
Os07t0622200-01	Rice	plastid	90.37	90.88
TraesCS2D01G170400.1	Wheat	plastid	86.67	87.48
TraesCS2B01G189300.1	Wheat	plastid	86.67	87.15
TraesCS2A01G163600.1	Wheat	golgi, plastid	85.93	86.89
HORVU2Hr1G029870.4	Barley	plastid	79.63	85.32
EER94760	Sorghum	plastid	80.93	79.31
Zm00001d044716_P001	Maize	cytosol	30.19	77.62
CDX87459	Canola	plastid	74.07	77.22
CDY41485	Canola	plastid	73.52	76.79
Bra016381.1-P	Field mustard	plastid	73.52	76.79
Zm00001d013618_P002	Maize	plastid	51.3	76.73
CDY21361	Canola	plastid	73.52	76.64
CDY04818	Canola	plastid	73.52	76.64
Bra031389.1-P	Field mustard	plastid	73.52	76.64
CDX88433	Canola	plastid	73.89	76.58
CDY68560	Canola	plastid	73.15	76.4
EES14335	Sorghum	plastid	71.67	76.18
AT1G22410.1	Thale cress	plastid	74.07	75.9
Zm00001d020059_P001	Maize	cytosol	31.11	70.29
Solyc01g105390.2.1	Tomato	cytosol	22.78	64.74
Bra035024.1-P	Field mustard	cytosol	73.52	53.5
EER91915	Sorghum	plastid	12.04	13.03

Protein Annotations

KEGG:00400+2.5.1.54	Gene3D:3.20.20.70	MapMan:4.1.5.1.1	EntrezGene:8079214	InterPro:Aldolase_TIM	UniProt:C5X2H5
InterPro:DAHP_synth_2	EnsemblPlants:EER99720	ProteinID:EER99720	ProteinID:EER99720.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0003849	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009073	GO:GO:0009423	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	InterPro:IPR013785	PFAM:PF01474	PANTHER:PTHR21337
PANTHER:PTHR21337:SF18	MetaCyc:PWY-6164	EnsemblPlantsGene:SORBI_3002G379600	SUPFAM:SSF51569	unigene:Sbi.14835	TIGRFAMs:TIGR01358
UniParc:UPI0001A83E28	RefSeq:XP_002463199.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:73572791..73577695

Molecular Weight (calculated)

59177.9 Da

IEP (calculated)

8.381

GRAVY (calculated)

-0.271

Length

540 amino acids

Sequence
(BLAST)

001: MALATNSAAA AAAAAAVSGG ASSQPRRAAV FLPLKRRTIS AIHAADPSKN NGPAVPAAAA AKSSASAVAT PEKKPAAPGK WAVDSWKSKK ALQLPEYPNQ
101: EELDTVLKTI ETFPPVVFAG EARHLEERMA EAAMGRAFVL QGGDCAESFK EFHANNIRDT FRILLQMGAV LMFGGQVPVV KVGRMAGQFA KPRSEPFEER
201: DGVKLPSYRG DNVNGDDFTE KSRVPDPQRM IRAYAQSVAT LNLLRAFATG GYAAMQRVTQ WNLDFMDHSE QGDRYRELAH RVDEALGFMT AAGLTVDHPI
301: MTTTDFWTSH ECLLLPYEQA LTREDSTSGL FYDCSAHMLW VGERTRQLDG AHVEFLRGVA NPLGIKVSDK MNPSDLVKLI EILNPSNKPG RITIITRMGA
401: ENMRVKLPHL IRAVRNAGLI VTWITDPMHG NTIKAPCGLK TRPFDSILAE VRAFFDVHDQ EGSHPGGIHL EMTGQNVTEC IGGSRTVTFD DLSDRYHTHC
501: DPRLNASQSL ELAFIIAERL RKRRMRSGLN NSLPLPPLAF

Best Arabidopsis Sequence Match ( AT1G22410.1 )
(BLAST)

001: MALMNGSMNL SSVKSSMINH RQPNFSSAVS RPTSFRISAV QTDPKTPAAS SASAATTTPA TLTKPVGVNV GKGKWAPESW RTKKALQQPD YPDLAALEAV
101: LETIEAFPPI VFAGEARLLE ERLGQAAMGE AFLLQGGDCA ESFKEFNANN IRDTFRILLQ MGAVLMFGGQ VPVVKVGRMA GQFAKPRSDS FEEKDGVKLP
201: SYRGDNINGD AFDSKSRIPD PQRMIRAYCQ SAATLNLLRA FATGGYAAMQ RVTQWNLDFT ERSEQGDRYR ELANRVDEAL GFMHAAGLTL DHPIMQTTDF
301: WTSHECLLLP YEQSLTRLDS TSGLYYDCSA HMIWVGERTR QLDGAHVEFL RGVANPLGIK VSDKMDPKEL VKLIEILNAD NKPGRITIIT RMGAENMRVK
401: LPHLIREVRR AGQIVTWVSD PMHGNTIKAP CGLKTRPFDA ILAEVRAFFD VHEQEGSHPG GIHLEMTGQN VTECIGGSRT VTFDDLGSRY HTHCDPRLNA
501: SQSLELSFII AERLRKRRIK SQKAFAL

Arabidopsis Description

Phospho-2-dehydro-3-deoxyheptonate aldolase [Source:UniProtKB/TrEMBL;Acc:Q9SK84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.