Factsheet for GSMUA_Achr11P06950_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 4
plastid 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G020800.1	Barley	plastid	40.98	31.45
TraesCS7A01G077700.1	Wheat	cytosol	51.64	22.42
CDY65887	Canola	cytosol	49.18	22.39
CDY55090	Canola	cytosol	49.18	22.14
GSMUA_Achr10P...	Banana	cytosol	51.64	22.11
CDY45223	Canola	cytosol	47.54	21.64
GSMUA_Achr2P02760_001	Banana	cytosol	37.7	21.3
EES03228	Sorghum	plastid	21.31	19.85
GSMUA_Achr2P02740_001	Banana	cytosol	37.7	18.55
TraesCS7A01G078000.2	Wheat	cytosol	53.28	17.47
TraesCS7D01G073400.1	Wheat	cytosol	53.28	17.29
TraesCS4A01G376500.1	Wheat	cytosol	53.28	17.24
TraesCS7D01G073300.1	Wheat	cytosol	52.46	17.2
Os06t0137700-01	Rice	cytosol	52.46	17.07
Bra031811.1-P	Field mustard	cytosol	49.18	16.9
Bra012865.1-P	Field mustard	cytosol	50.0	16.9
CDX90659	Canola	cytosol	50.0	16.9
Zm00001d045420_P001	Maize	cytosol	50.82	16.71
CDY33292	Canola	cytosol	49.18	16.67
CDY16314	Canola	cytosol	49.18	16.67
Bra038888.1-P	Field mustard	cytosol	49.18	16.67
CDY29005	Canola	cytosol	49.18	16.62
Bra036833.1-P	Field mustard	cytosol	48.36	16.39
CDX77979	Canola	cytosol	48.36	16.39
CDX73745	Canola	cytosol	48.36	16.39
AT5G66280.1	Thale cress	cytosol	48.36	16.34
PGSC0003DMT400036764	Potato	cytosol	48.36	16.25
Solyc03g118270.1.1	Tomato	cytosol	48.36	16.25
Zm00001d036091_P001	Maize	plasma membrane	50.0	16.18
AT3G51160.1	Thale cress	cytosol	49.18	16.09
PGSC0003DMT400009345	Potato	cytosol	46.72	15.83
VIT_04s0023g03170.t01	Wine grape	cytosol	48.36	15.82
Solyc02g084210.1.1	Tomato	cytosol	46.72	15.79
Bra012067.1-P	Field mustard	cytosol	47.54	15.76
KRH76673	Soybean	cytosol, nucleus	46.72	15.62
KRH28781	Soybean	cytosol, mitochondrion, nucleus	46.72	15.62
CDY30776	Canola	cytosol	32.79	13.61
CDX81397	Canola	cytosol	7.38	10.23
GSMUA_Achr11P...	Banana	cytosol	4.1	8.93

Protein Annotations

KEGG:00051+4.2.1.47	KEGG:00520+4.2.1.47	MapMan:3.13.2.1.1	Gene3D:3.40.50.720	InterPro:GDP_Man_deHydtase	GO:GO:0003674
GO:GO:0003824	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0008446	GO:GO:0009987
GO:GO:0019673	EnsemblPlantsGene:GSMUA_Achr11G06950_001	EnsemblPlants:GSMUA_Achr11P06950_001	EnsemblPlants:GSMUA_Achr11T06950_001	UniProt:M0RQ25	InterPro:NAD(P)-bd_dom
InterPro:NAD(P)-bd_dom_sf	PFAM:PF16363	PANTHER:PTHR43715	SUPFAM:SSF51735	UniParc:UPI0002950747	SEG:seg

Description

GDP-mannose 4,6 dehydratase 2 [Source:GMGC_GENE;Acc:GSMUA_Achr11G06950_001]

Coordinates

chr11:-:5447377..5447745

Molecular Weight (calculated)

13913.5 Da

IEP (calculated)

11.857

GRAVY (calculated)

-0.891

Length

122 amino acids

Sequence
(BLAST)

001: MFGSTPPPQS EASPYAAAKV AAHWYTVNYR ETYGLFACNG FLFNHESPRR GQNFVTRMNH PCRLPHPPRP PDQGLPRQLL GRPRLGVRRR LRRGHVDDAT
101: WWPPRSPTPW RSCSRPPSAT SA

Best Arabidopsis Sequence Match ( AT3G51160.1 )
(BLAST)

001: MASENNGSRS DSESITAPKA DSTVVEPRKI ALITGITGQD GSYLTEFLLG KGYEVHGLIR RSSNFNTQRI NHIYIDPHNV NKALMKLHYA DLTDASSLRR
101: WIDVIKPDEV YNLAAQSHVA VSFEIPDYTA DVVATGALRL LEAVRSHTID SGRTVKYYQA GSSEMFGSTP PPQSETTPFH PRSPYAASKC AAHWYTVNYR
201: EAYGLFACNG ILFNHESPRR GENFVTRKIT RALGRIKVGL QTKLFLGNLQ ASRDWGFAGD YVEAMWLMLQ QEKPDDYVVA TEEGHTVEEF LDVSFGYLGL
301: NWKDYVEIDQ RYFRPAEVDN LQGDASKAKE VLGWKPQVGF EKLVKMMVDE DLELAKREKV LVDAGYMDAK QQP

Arabidopsis Description

MUR1MUR_1 [Source:UniProtKB/TrEMBL;Acc:A0A178V6B0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.