Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- golgi 2
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G077700.1 | Wheat | cytosol | 68.53 | 91.46 |
| TraesCS7A01G078000.2 | Wheat | cytosol | 89.33 | 90.05 |
| TraesCS7D01G073400.1 | Wheat | cytosol | 89.07 | 88.83 |
| TraesCS4A01G376500.1 | Wheat | cytosol | 88.8 | 88.33 |
| Zm00001d045420_P001 | Maize | cytosol | 87.2 | 88.14 |
| HORVU7Hr1G018000.2 | Barley | cytosol | 87.2 | 87.9 |
| TraesCS7D01G073300.1 | Wheat | cytosol | 86.93 | 87.63 |
| Zm00001d036091_P001 | Maize | plasma membrane | 88.0 | 87.53 |
| KRH76673 | Soybean | cytosol, nucleus | 79.2 | 81.37 |
| CDY65887 | Canola | cytosol | 58.13 | 81.34 |
| CDY45223 | Canola | cytosol | 58.13 | 81.34 |
| CDY55090 | Canola | cytosol | 58.67 | 81.18 |
| KRH28781 | Soybean | cytosol, mitochondrion, nucleus | 77.87 | 80.0 |
| Bra031811.1-P | Field mustard | cytosol | 74.67 | 78.87 |
| Bra012865.1-P | Field mustard | cytosol | 75.47 | 78.39 |
| CDY33292 | Canola | cytosol | 75.2 | 78.33 |
| Bra038888.1-P | Field mustard | cytosol | 75.2 | 78.33 |
| PGSC0003DMT400036764 | Potato | cytosol | 75.73 | 78.24 |
| CDY29005 | Canola | cytosol | 75.2 | 78.12 |
| CDX90659 | Canola | cytosol | 75.2 | 78.12 |
| CDY16314 | Canola | cytosol | 74.93 | 78.06 |
| Solyc03g118270.1.1 | Tomato | cytosol | 75.47 | 77.96 |
| AT5G66280.1 | Thale cress | cytosol | 74.93 | 77.84 |
| CDX73745 | Canola | cytosol | 74.67 | 77.78 |
| CDX77979 | Canola | cytosol | 74.4 | 77.5 |
| Bra036833.1-P | Field mustard | cytosol | 74.4 | 77.5 |
| Solyc02g084210.1.1 | Tomato | cytosol | 74.4 | 77.29 |
| PGSC0003DMT400009345 | Potato | cytosol | 74.13 | 77.22 |
| VIT_04s0023g03170.t01 | Wine grape | cytosol | 76.53 | 76.94 |
| AT3G51160.1 | Thale cress | cytosol | 75.73 | 76.14 |
| Bra012067.1-P | Field mustard | cytosol | 74.4 | 75.82 |
| EES03228 | Sorghum | plastid | 25.87 | 74.05 |
| CDX81397 | Canola | cytosol | 16.53 | 70.45 |
| CDY30776 | Canola | cytosol | 50.93 | 64.97 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 17.07 | 52.46 |
Protein Annotations
| KEGG:00051+4.2.1.47 | KEGG:00520+4.2.1.47 | MapMan:3.13.2.1.1 | Gene3D:3.40.50.720 | Gene3D:3.90.25.10 | EMBL:AK061097 |
| EMBL:AK073547 | ProteinID:BAD68473.1 | ProteinID:BAD68653.1 | ProteinID:BAS96049.1 | InterPro:GDP_Man_deHydtase | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008446 | GO:GO:0009987 |
| GO:GO:0019673 | HAMAP:MF_00955 | InterPro:NAD(P)-bd_dom | InterPro:NAD(P)-bd_dom_sf | EnsemblPlantsGene:Os06g0137700 | EnsemblPlants:Os06t0137700-01 |
| PFAM:PF16363 | PANTHER:PTHR43715 | UniProt:Q5VPH2 | SUPFAM:SSF51735 | TIGRFAMs:TIGR01472 | UniParc:UPI0000457E99 |
| SEG:seg | : | : | : | : | : |
Description
Similar to GDP-mannose 4,6 dehydratase 2. (Os06t0137700-01);Similar to GDP-mannose 4,6 dehydratase 1 (EC 4.2.1.47) (GDP-D-mannose dehydratase 1) (GMD 1). (Os06t0137700-03)
Coordinates
chr6:+:2017778..2019351
Molecular Weight (calculated)
41572.0 Da
IEP (calculated)
7.902
GRAVY (calculated)
-0.482
Length
375 amino acids
Sequence
(BLAST)
(BLAST)
001: MATTQHSNGG AAGDNGEAAP PSVPPSLAPP RKVALVTGIT GQDGSYLTEL LLGKGYEVHG LIRRSSNFNT QRLDHIYHDP HSQPSTPRPP MRLHYADLSD
101: SSSLRRALDH ILPDEVYNLA AQSHVAVSFE VPDYTADVTA TGALRLLEAV RLASKRIRYY QAGSSEMFGS TPPPQSESSP FHPRSPYAAA KVAAHWYTVN
201: YREAYGLFAC NGVLFNHESP RRGENFVTRK ITRAVGRIKV GLQTKVFLGN LSAARDWGFA GDYVEAMWRM LQQDKPGDYV VATEESHTVE EFLQAAFGYA
301: GLNWKDHVVI DKKYFRPAEV DSLQGDATKA RKELGWKPKV GFQQLVEMMV DNDIELAKKE KVLVDAGYRD PKQQP
101: SSSLRRALDH ILPDEVYNLA AQSHVAVSFE VPDYTADVTA TGALRLLEAV RLASKRIRYY QAGSSEMFGS TPPPQSESSP FHPRSPYAAA KVAAHWYTVN
201: YREAYGLFAC NGVLFNHESP RRGENFVTRK ITRAVGRIKV GLQTKVFLGN LSAARDWGFA GDYVEAMWRM LQQDKPGDYV VATEESHTVE EFLQAAFGYA
301: GLNWKDHVVI DKKYFRPAEV DSLQGDATKA RKELGWKPKV GFQQLVEMMV DNDIELAKKE KVLVDAGYRD PKQQP
001: MASENNGSRS DSESITAPKA DSTVVEPRKI ALITGITGQD GSYLTEFLLG KGYEVHGLIR RSSNFNTQRI NHIYIDPHNV NKALMKLHYA DLTDASSLRR
101: WIDVIKPDEV YNLAAQSHVA VSFEIPDYTA DVVATGALRL LEAVRSHTID SGRTVKYYQA GSSEMFGSTP PPQSETTPFH PRSPYAASKC AAHWYTVNYR
201: EAYGLFACNG ILFNHESPRR GENFVTRKIT RALGRIKVGL QTKLFLGNLQ ASRDWGFAGD YVEAMWLMLQ QEKPDDYVVA TEEGHTVEEF LDVSFGYLGL
301: NWKDYVEIDQ RYFRPAEVDN LQGDASKAKE VLGWKPQVGF EKLVKMMVDE DLELAKREKV LVDAGYMDAK QQP
101: WIDVIKPDEV YNLAAQSHVA VSFEIPDYTA DVVATGALRL LEAVRSHTID SGRTVKYYQA GSSEMFGSTP PPQSETTPFH PRSPYAASKC AAHWYTVNYR
201: EAYGLFACNG ILFNHESPRR GENFVTRKIT RALGRIKVGL QTKLFLGNLQ ASRDWGFAGD YVEAMWLMLQ QEKPDDYVVA TEEGHTVEEF LDVSFGYLGL
301: NWKDYVEIDQ RYFRPAEVDN LQGDASKAKE VLGWKPQVGF EKLVKMMVDE DLELAKREKV LVDAGYMDAK QQP
Arabidopsis Description
MUR1MUR_1 [Source:UniProtKB/TrEMBL;Acc:A0A178V6B0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.