Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER89154 | Sorghum | cytosol | 94.88 | 94.12 |
| EER87803 | Sorghum | cytosol | 92.99 | 92.25 |
| Zm00001d036091_P001 | Maize | plasma membrane | 93.53 | 92.04 |
| TraesCS7A01G077700.1 | Wheat | cytosol | 67.39 | 88.97 |
| HORVU1Hr1G083130.2 | Barley | cytosol | 52.02 | 87.73 |
| Os06t0137700-01 | Rice | cytosol | 88.14 | 87.2 |
| TraesCS7A01G078000.2 | Wheat | cytosol | 87.06 | 86.83 |
| TraesCS7D01G073400.1 | Wheat | cytosol | 87.06 | 85.9 |
| TraesCS4A01G376500.1 | Wheat | cytosol | 86.79 | 85.41 |
| HORVU7Hr1G018000.2 | Barley | cytosol | 85.18 | 84.95 |
| TraesCS7D01G073300.1 | Wheat | cytosol | 84.37 | 84.14 |
| CDY65887 | Canola | cytosol | 58.22 | 80.6 |
| CDY55090 | Canola | cytosol | 58.76 | 80.44 |
| CDY45223 | Canola | cytosol | 57.95 | 80.22 |
| KRH76673 | Soybean | cytosol, nucleus | 77.36 | 78.63 |
| PGSC0003DMT400036764 | Potato | cytosol | 76.55 | 78.24 |
| KRH28781 | Soybean | cytosol, mitochondrion, nucleus | 76.82 | 78.08 |
| Solyc03g118270.1.1 | Tomato | cytosol | 76.28 | 77.96 |
| Bra031811.1-P | Field mustard | cytosol | 74.39 | 77.75 |
| CDY33292 | Canola | cytosol | 74.12 | 76.39 |
| PGSC0003DMT400009345 | Potato | cytosol | 74.12 | 76.39 |
| AT5G66280.1 | Thale cress | cytosol | 74.12 | 76.18 |
| Bra012865.1-P | Field mustard | cytosol | 74.12 | 76.18 |
| Solyc02g084210.1.1 | Tomato | cytosol | 74.12 | 76.18 |
| CDY16314 | Canola | cytosol | 73.85 | 76.11 |
| Bra038888.1-P | Field mustard | cytosol | 73.85 | 76.11 |
| CDY29005 | Canola | cytosol | 73.85 | 75.9 |
| CDX90659 | Canola | cytosol | 73.85 | 75.9 |
| CDX73745 | Canola | cytosol | 73.58 | 75.83 |
| Bra036833.1-P | Field mustard | cytosol | 73.32 | 75.56 |
| CDX77979 | Canola | cytosol | 73.32 | 75.56 |
| VIT_04s0023g03170.t01 | Wine grape | cytosol | 75.74 | 75.34 |
| Bra012067.1-P | Field mustard | cytosol | 73.85 | 74.46 |
| AT3G51160.1 | Thale cress | cytosol | 74.66 | 74.26 |
| CDX81397 | Canola | cytosol | 16.98 | 71.59 |
| CDY30776 | Canola | cytosol | 50.4 | 63.61 |
| HORVU6Hr1G020800.1 | Barley | plastid | 26.15 | 61.01 |
| HORVU7Hr1G018100.2 | Barley | cytosol | 42.05 | 57.14 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 16.71 | 50.82 |
Protein Annotations
| KEGG:00051+4.2.1.47 | KEGG:00520+4.2.1.47 | EntrezGene:103638108 | MapMan:3.13.2.1.1 | Gene3D:3.40.50.720 | Gene3D:3.90.25.10 |
| ProteinID:AQL02244.1 | InterPro:GDP_Man_deHydtase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006139 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008446 | GO:GO:0009987 | GO:GO:0019673 | UniProt:K7W6W9 | HAMAP:MF_00955 |
| InterPro:NAD(P)-bd_dom | InterPro:NAD(P)-bd_dom_sf | PFAM:PF16363 | PANTHER:PTHR43715 | SUPFAM:SSF51735 | TIGRFAMs:TIGR01472 |
| UniParc:UPI000221C244 | EnsemblPlantsGene:Zm00001d045420 | EnsemblPlants:Zm00001d045420_P001 | EnsemblPlants:Zm00001d045420_T001 | SEG:seg | : |
Description
Root cap-specific protein
Coordinates
chr9:-:21559799..21560914
Molecular Weight (calculated)
41310.9 Da
IEP (calculated)
8.364
GRAVY (calculated)
-0.410
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHSTTATAT ATDGETAPVP RALAPARKVA LITGITGQDG SYLTELLLSK GYEVHGLMRR SSNFNTQRLD HIYHDPHAVP SSPRPPLRLH YADLSDSSSL
101: RRALDAISPD EVYNLAAQSH VAVSFEVPDY TADVTATGAL RLLEAVRLSR RPIRYYQAGS SEMFGSTPPP QGEDTPFHPR SPYAAAKVAA HWYTVNYREA
201: YGVFACNGVL FNHESPRRGE NFVTRKITRA VGRIKLGLQT KVFLGNLSAA RDWGFAGDYV EAMWLMLQQD QPADYVVATE ESHTVEEFLQ AAFGYAGLNW
301: KDHVVIDKKY FRPAEVDSLQ GDSTKARKLL KWKPKVGFQQ LVEMMVDRDV ELAKKEKVLV DAGYRDPKQQ P
101: RRALDAISPD EVYNLAAQSH VAVSFEVPDY TADVTATGAL RLLEAVRLSR RPIRYYQAGS SEMFGSTPPP QGEDTPFHPR SPYAAAKVAA HWYTVNYREA
201: YGVFACNGVL FNHESPRRGE NFVTRKITRA VGRIKLGLQT KVFLGNLSAA RDWGFAGDYV EAMWLMLQQD QPADYVVATE ESHTVEEFLQ AAFGYAGLNW
301: KDHVVIDKKY FRPAEVDSLQ GDSTKARKLL KWKPKVGFQQ LVEMMVDRDV ELAKKEKVLV DAGYRDPKQQ P
001: MASENNGSRS DSESITAPKA DSTVVEPRKI ALITGITGQD GSYLTEFLLG KGYEVHGLIR RSSNFNTQRI NHIYIDPHNV NKALMKLHYA DLTDASSLRR
101: WIDVIKPDEV YNLAAQSHVA VSFEIPDYTA DVVATGALRL LEAVRSHTID SGRTVKYYQA GSSEMFGSTP PPQSETTPFH PRSPYAASKC AAHWYTVNYR
201: EAYGLFACNG ILFNHESPRR GENFVTRKIT RALGRIKVGL QTKLFLGNLQ ASRDWGFAGD YVEAMWLMLQ QEKPDDYVVA TEEGHTVEEF LDVSFGYLGL
301: NWKDYVEIDQ RYFRPAEVDN LQGDASKAKE VLGWKPQVGF EKLVKMMVDE DLELAKREKV LVDAGYMDAK QQP
101: WIDVIKPDEV YNLAAQSHVA VSFEIPDYTA DVVATGALRL LEAVRSHTID SGRTVKYYQA GSSEMFGSTP PPQSETTPFH PRSPYAASKC AAHWYTVNYR
201: EAYGLFACNG ILFNHESPRR GENFVTRKIT RALGRIKVGL QTKLFLGNLQ ASRDWGFAGD YVEAMWLMLQ QEKPDDYVVA TEEGHTVEEF LDVSFGYLGL
301: NWKDYVEIDQ RYFRPAEVDN LQGDASKAKE VLGWKPQVGF EKLVKMMVDE DLELAKREKV LVDAGYMDAK QQP
Arabidopsis Description
MUR1MUR_1 [Source:UniProtKB/TrEMBL;Acc:A0A178V6B0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.