CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
golgi 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER89154	Sorghum	cytosol	96.79	96.79
Zm00001d045420_P001	Maize	cytosol	92.25	92.99
CDY65887	Canola	cytosol	57.75	80.6
CDY45223	Canola	cytosol	57.75	80.6
CDY55090	Canola	cytosol	58.29	80.44
EES03228	Sorghum	plastid	28.07	80.15
KRH76673	Soybean	cytosol, nucleus	77.81	79.73
PGSC0003DMT400036764	Potato	cytosol	76.74	79.06
KRH28781	Soybean	cytosol, mitochondrion, nucleus	77.01	78.9
Solyc03g118270.1.1	Tomato	cytosol	76.47	78.79
Bra031811.1-P	Field mustard	cytosol	74.06	78.03
Bra012865.1-P	Field mustard	cytosol	75.13	77.84
CDX90659	Canola	cytosol	74.87	77.56
CDY29005	Canola	cytosol	74.87	77.56
CDY33292	Canola	cytosol	74.6	77.5
PGSC0003DMT400009345	Potato	cytosol	74.6	77.5
Solyc02g084210.1.1	Tomato	cytosol	74.6	77.29
CDY16314	Canola	cytosol	74.33	77.22
Bra038888.1-P	Field mustard	cytosol	74.33	77.22
CDX73745	Canola	cytosol	74.06	76.94
VIT_04s0023g03170.t01	Wine grape	cytosol	76.74	76.94
AT5G66280.1	Thale cress	cytosol	74.06	76.73
CDX77979	Canola	cytosol	73.53	76.39
Bra036833.1-P	Field mustard	cytosol	73.53	76.39
AT3G51160.1	Thale cress	cytosol	74.87	75.07
Bra012067.1-P	Field mustard	cytosol	73.8	75.0
CDX81397	Canola	cytosol	16.84	71.59
CDY30776	Canola	cytosol	51.07	64.97

Protein Annotations

KEGG:00051+4.2.1.47	KEGG:00520+4.2.1.47	MapMan:3.13.2.1.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EntrezGene:8069086
UniProt:C5Z3Q6	EnsemblPlants:EER87803	ProteinID:EER87803	ProteinID:EER87803.1	InterPro:GDP_Man_deHydtase	GO:GO:0003674
GO:GO:0003824	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0008446	GO:GO:0009987
GO:GO:0019673	HAMAP:MF_00955	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PFAM:PF16363	PANTHER:PTHR43715
MetaCyc:PWY-5738	MetaCyc:PWY-5739	MetaCyc:PWY-5740	MetaCyc:PWY-66	MetaCyc:PWY-7573	EnsemblPlantsGene:SORBI_3010G028100
SUPFAM:SSF51735	unigene:Sbi.21302	TIGRFAMs:TIGR01472	UniParc:UPI0001A88F07	RefSeq:XP_002436436.1	SEG:seg

Description

hypothetical protein

Coordinates

chr10:+:2291829..2293224

Molecular Weight (calculated)

41437.0 Da

IEP (calculated)

7.218

GRAVY (calculated)

-0.378

Length

374 amino acids

Sequence
(BLAST)

001: MAHSNGAAAT ATAAGDGETT PVPRPLAPAQ KVALITGITG QDGSYLTELL LSKGYEVHGL IRRSSNFNTQ RLDHIYHDPH AVPSSPRPLM QLHYADLTDS
101: SSLRRVLDAV SPDEVYNLAA QSHVAVSFEV PDYTADVTAT GALSLLEAVR LSRKPIRYYQ AGSSEMFGST PPPQSEDTPF HPRSPYAASK VAAHWYTVNY
201: REAYGIFACN GVLFNHESPR RGENFVTRKI TRAVGRIKLG LQTKVFLGNL SAARDWGFAG DYVEAMWLML QQDQPADYVV ATEESHTVEE FLQAAFGYAG
301: LNWKDHVVID KKYFRPAEVD SLKGDSTKAR KVLKWKPKVG FQQLVEMMVD HDIELAKKEK VLVDAGYRDP KQQP

Best Arabidopsis Sequence Match ( AT3G51160.1 )
(BLAST)

001: MASENNGSRS DSESITAPKA DSTVVEPRKI ALITGITGQD GSYLTEFLLG KGYEVHGLIR RSSNFNTQRI NHIYIDPHNV NKALMKLHYA DLTDASSLRR
101: WIDVIKPDEV YNLAAQSHVA VSFEIPDYTA DVVATGALRL LEAVRSHTID SGRTVKYYQA GSSEMFGSTP PPQSETTPFH PRSPYAASKC AAHWYTVNYR
201: EAYGLFACNG ILFNHESPRR GENFVTRKIT RALGRIKVGL QTKLFLGNLQ ASRDWGFAGD YVEAMWLMLQ QEKPDDYVVA TEEGHTVEEF LDVSFGYLGL
301: NWKDYVEIDQ RYFRPAEVDN LQGDASKAKE VLGWKPQVGF EKLVKMMVDE DLELAKREKV LVDAGYMDAK QQP

Arabidopsis Description

MUR1MUR_1 [Source:UniProtKB/TrEMBL;Acc:A0A178V6B0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.