CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
golgi 2
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER87803	Sorghum	cytosol	96.79	96.79
Zm00001d045420_P001	Maize	cytosol	94.12	94.88
CDY65887	Canola	cytosol	58.56	81.72
CDY45223	Canola	cytosol	58.56	81.72
EES03228	Sorghum	plastid	28.61	81.68
CDY55090	Canola	cytosol	59.09	81.55
KRH76673	Soybean	cytosol, nucleus	78.88	80.82
KRH28781	Soybean	cytosol, mitochondrion, nucleus	78.07	80.0
PGSC0003DMT400036764	Potato	cytosol	77.01	79.34
Solyc03g118270.1.1	Tomato	cytosol	76.74	79.06
Bra031811.1-P	Field mustard	cytosol	74.87	78.87
CDY33292	Canola	cytosol	75.4	78.33
Bra012865.1-P	Field mustard	cytosol	75.4	78.12
CDY16314	Canola	cytosol	75.13	78.06
Bra038888.1-P	Field mustard	cytosol	75.13	78.06
PGSC0003DMT400009345	Potato	cytosol	75.13	78.06
VIT_04s0023g03170.t01	Wine grape	cytosol	77.81	78.02
CDY29005	Canola	cytosol	75.13	77.84
CDX90659	Canola	cytosol	75.13	77.84
Solyc02g084210.1.1	Tomato	cytosol	75.13	77.84
CDX73745	Canola	cytosol	74.87	77.78
AT5G66280.1	Thale cress	cytosol	74.87	77.56
CDX77979	Canola	cytosol	74.33	77.22
Bra036833.1-P	Field mustard	cytosol	74.33	77.22
Bra012067.1-P	Field mustard	cytosol	74.87	76.09
AT3G51160.1	Thale cress	cytosol	75.13	75.34
CDX81397	Canola	cytosol	16.84	71.59
CDY30776	Canola	cytosol	51.6	65.65

Protein Annotations

KEGG:00051+4.2.1.47	KEGG:00520+4.2.1.47	MapMan:3.13.2.1.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EntrezGene:8068417
UniProt:C5Z3Q8	EnsemblPlants:EER89154	ProteinID:EER89154	ProteinID:EER89154.1	InterPro:GDP_Man_deHydtase	GO:GO:0003674
GO:GO:0003824	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0008446	GO:GO:0009987
GO:GO:0019673	HAMAP:MF_00955	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PFAM:PF16363	PANTHER:PTHR43715
MetaCyc:PWY-5738	MetaCyc:PWY-5739	MetaCyc:PWY-5740	MetaCyc:PWY-66	MetaCyc:PWY-7573	EnsemblPlantsGene:SORBI_3010G028200
SUPFAM:SSF51735	unigene:Sbi.18462	TIGRFAMs:TIGR01472	UniParc:UPI0001A89AAC	RefSeq:XP_002437787.1	SEG:seg

Description

hypothetical protein

Coordinates

chr10:-:2300357..2303004

Molecular Weight (calculated)

41432.0 Da

IEP (calculated)

8.367

GRAVY (calculated)

-0.390

Length

374 amino acids

Sequence
(BLAST)

001: MAHSNGAAAT ATAAGDGETA PVPRSLAPAR KVALITGITG QDGSYLTELL LSKGYEVHGL IRRSSNFNTQ RLDHIYHDPH AVPSSPRPPM RLHYADLSDS
101: SSLRRALDAI APDEVYNLAA QSHVAVSFEV PDYTADVTAT GALRLLEAVR LSRKPIRYYQ AGSSEMFGST PPPQSEDTPF HPRSPYAAAK VAAHWYTVNY
201: REAYGIFACN GVLFNHESPR RGENFVTRKI TRAVGRIKVG LQTKVFLGNL SAARDWGFAG DYVEAMWLML QQDQPADYVV ATEESHTVEE FLQAAFGYAG
301: LNWKDHVVID KKYFRPAEVD SLKGDSTKAR KVLKWKPKVG FQQLVEMMVD HDIELAKKEK VLVDAGYRDP KQQP

Best Arabidopsis Sequence Match ( AT3G51160.1 )
(BLAST)

001: MASENNGSRS DSESITAPKA DSTVVEPRKI ALITGITGQD GSYLTEFLLG KGYEVHGLIR RSSNFNTQRI NHIYIDPHNV NKALMKLHYA DLTDASSLRR
101: WIDVIKPDEV YNLAAQSHVA VSFEIPDYTA DVVATGALRL LEAVRSHTID SGRTVKYYQA GSSEMFGSTP PPQSETTPFH PRSPYAASKC AAHWYTVNYR
201: EAYGLFACNG ILFNHESPRR GENFVTRKIT RALGRIKVGL QTKLFLGNLQ ASRDWGFAGD YVEAMWLMLQ QEKPDDYVVA TEEGHTVEEF LDVSFGYLGL
301: NWKDYVEIDQ RYFRPAEVDN LQGDASKAKE VLGWKPQVGF EKLVKMMVDE DLELAKREKV LVDAGYMDAK QQP

Arabidopsis Description

MUR1MUR_1 [Source:UniProtKB/TrEMBL;Acc:A0A178V6B0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.