Factsheet for Bra038888.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
golgi 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33292	Canola	cytosol	99.44	99.44
CDY16314	Canola	cytosol	99.17	99.17
Bra036833.1-P	Field mustard	cytosol	95.0	95.0
Bra012865.1-P	Field mustard	cytosol	94.17	93.91
Bra031811.1-P	Field mustard	cytosol	90.0	91.27
AT3G51160.1	Thale cress	cytosol	92.5	89.28
Bra012067.1-P	Field mustard	cytosol	89.72	87.77
KRH76673	Soybean	cytosol, nucleus	87.22	86.03
KRH28781	Soybean	cytosol, mitochondrion, nucleus	86.94	85.75
Solyc02g084210.1.1	Tomato	cytosol	84.72	84.49
PGSC0003DMT400036764	Potato	cytosol	85.0	84.3
PGSC0003DMT400009345	Potato	cytosol	84.17	84.17
Solyc03g118270.1.1	Tomato	cytosol	84.72	84.02
GSMUA_Achr10P...	Banana	cytosol	65.56	82.81
VIT_04s0023g03170.t01	Wine grape	cytosol	85.28	82.31
TraesCS7A01G077700.1	Wheat	cytosol	62.5	80.07
HORVU1Hr1G083130.2	Barley	cytosol	46.67	76.36
TraesCS7A01G078000.2	Wheat	cytosol	78.33	75.81
TraesCS7D01G073400.1	Wheat	cytosol	78.61	75.27
Os06t0137700-01	Rice	cytosol	78.33	75.2
EER89154	Sorghum	cytosol	78.06	75.13
TraesCS4A01G376500.1	Wheat	cytosol	78.61	75.07
Zm00001d036091_P001	Maize	plasma membrane	78.06	74.54
EER87803	Sorghum	cytosol	77.22	74.33
HORVU7Hr1G018000.2	Barley	cytosol	76.39	73.92
Zm00001d045420_P001	Maize	cytosol	76.11	73.85
TraesCS7D01G073300.1	Wheat	cytosol	76.11	73.66
GSMUA_Achr11P...	Banana	cytosol	11.39	73.21
GSMUA_Achr2P02760_001	Banana	cytosol	42.22	70.37
EES03228	Sorghum	plastid	23.89	65.65
GSMUA_Achr2P02740_001	Banana	cytosol	43.06	62.5
HORVU6Hr1G020800.1	Barley	plastid	25.56	57.86
HORVU7Hr1G018100.2	Barley	cytosol	38.06	50.18
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	16.67	49.18
HORVU7Hr1G018110.1	Barley	mitochondrion, plastid	15.28	44.0

Protein Annotations

KEGG:00051+4.2.1.47	KEGG:00520+4.2.1.47	MapMan:3.13.2.1.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EnsemblPlantsGene:Bra038888
EnsemblPlants:Bra038888.1	EnsemblPlants:Bra038888.1-P	InterPro:GDP_Man_deHydtase	GO:GO:0003674	GO:GO:0003824	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0008446	GO:GO:0009987	GO:GO:0019673	UniProt:M4FCR9
HAMAP:MF_00955	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PFAM:PF16363	PANTHER:PTHR43715	SUPFAM:SSF51735
TIGRFAMs:TIGR01472	UniParc:UPI00025453BE	:	:	:	:

Description

AT3G51160 (E=1e-194) MUR1, MUR_1, GMD2 | MUR1 (MURUS 1); GDP-mannose 4,6-dehydratase

Coordinates

chrA01:+:12736404..12737486

Molecular Weight (calculated)

40561.0 Da

IEP (calculated)

6.383

GRAVY (calculated)

-0.424

Length

360 amino acids

Sequence
(BLAST)

001: MASENNGSTA VETPRKVALV TGITGQDGSY LTELLLEKGY EVHGLIRRSS NFNTQRINHI YIDPHNANKA LMKLHYADLS DASSLRRWLD VIKPDEVYNL
101: AAQSHVAVSF EIPDYTADVV ATGALRLLEA VRSHTVDSGR TVKYYQAGSS EMFGATPPPQ SETTPFHPRS PYAASKVAAH WYTVNYREAY GLFACNGILF
201: NHESPRRGEN FVTRKITRAL GRIKVGLQRK LFLGNLQASR DWGFAGDYVE AMWLMLQQEK ADDYVVATEE SHTVEEFLEV SFGYLGLNWK DHVEIDERYF
301: RPAEVDNLKG DASKAKEVLG WKPKVGFEKL VKMMVDEDLE IAKREKLLVD AGHMDAQQQP

Best Arabidopsis Sequence Match ( AT3G51160.1 )
(BLAST)

001: MASENNGSRS DSESITAPKA DSTVVEPRKI ALITGITGQD GSYLTEFLLG KGYEVHGLIR RSSNFNTQRI NHIYIDPHNV NKALMKLHYA DLTDASSLRR
101: WIDVIKPDEV YNLAAQSHVA VSFEIPDYTA DVVATGALRL LEAVRSHTID SGRTVKYYQA GSSEMFGSTP PPQSETTPFH PRSPYAASKC AAHWYTVNYR
201: EAYGLFACNG ILFNHESPRR GENFVTRKIT RALGRIKVGL QTKLFLGNLQ ASRDWGFAGD YVEAMWLMLQ QEKPDDYVVA TEEGHTVEEF LDVSFGYLGL
301: NWKDYVEIDQ RYFRPAEVDN LQGDASKAKE VLGWKPQVGF EKLVKMMVDE DLELAKREKV LVDAGYMDAK QQP

Arabidopsis Description

MUR1MUR_1 [Source:UniProtKB/TrEMBL;Acc:A0A178V6B0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.