Factsheet for GSMUA_Achr8P10210_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr4P22850_001
GSMUA_Achr7P01270_001
GSMUA_Achr7P14310_001
GSMUA_Achr7P14320_001
GSMUA_Achr8P07200_001
GSMUA_Achr9P23340_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G15900.1	GSMUA_Achr9P23340_001	AT1G09770.1	17575050
AT4G15900.1	GSMUA_Achr10P...	AT3G29160.1	10220464
AT4G15900.1	GSMUA_AchrUn_...	AT3G29160.1	10220464
AT4G15900.1	GSMUA_Achr8P07200_001	AT4G05420.1	18223036
AT4G15900.1	GSMUA_Achr4P22850_001	AT5G46210.1	18223036
AT4G15900.1	GSMUA_Achr7P01270_001	AT5G46210.1	18223036
AT4G15900.1	GSMUA_Achr7P14310_001	AT5G58720.1	10220464
AT4G15900.1	GSMUA_Achr7P14320_001	AT5G58720.1	10220464

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27174	Canola	cytosol	82.11	50.98
CDY44171	Canola	cytosol	55.79	34.19
Bra007287.1-P	Field mustard	cytosol	81.05	19.25
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome, plastid	97.89	19.14
Os03t0339100-01	Rice	nucleus	91.58	18.43
TraesCS3A01G175600.2	Wheat	plastid	90.53	17.99
TraesCS3D01G181100.1	Wheat	cytosol	90.53	17.95
TraesCS3B01G205300.1	Wheat	cytosol	90.53	17.95
KXG25821	Sorghum	cytosol	89.47	17.75
Zm00001d033309_P003	Maize	cytosol	89.47	17.6
PGSC0003DMT400023040	Potato	mitochondrion	56.84	17.59
VIT_05s0077g02310.t01	Wine grape	cytosol	88.42	17.36
HORVU3Hr1G035450.7	Barley	mitochondrion	90.53	16.8
Solyc09g010620.1.1	Tomato	cytosol	28.42	16.56
KRH12069	Soybean	nucleus	82.11	16.39
KRH37088	Soybean	nucleus	82.11	16.35
Bra012753.1-P	Field mustard	cytosol	81.05	16.01
AT3G16650.1	Thale cress	cytosol	80.0	15.87
AT4G15900.1	Thale cress	cytosol	81.05	15.84
Bra021188.1-P	Field mustard	cytosol	82.11	15.69
GSMUA_Achr7P01850_001	Banana	plastid	12.63	5.13
GSMUA_Achr11P...	Banana	cytosol	17.89	4.93
GSMUA_Achr2P08580_001	Banana	cytosol	12.63	4.23
GSMUA_Achr6P13100_001	Banana	cytosol	11.58	3.62
GSMUA_Achr4P10720_001	Banana	cytosol, plastid	12.63	3.56
GSMUA_Achr8P28660_001	Banana	cytosol	11.58	3.26
GSMUA_Achr3P29050_001	Banana	nucleus	12.63	2.51
GSMUA_Achr3P27210_001	Banana	golgi	11.58	2.33
GSMUA_Achr2P06000_001	Banana	cytosol	11.58	2.32
GSMUA_Achr4P29380_001	Banana	nucleus	16.84	2.25
GSMUA_Achr4P05370_001	Banana	golgi, mitochondrion	17.89	2.14
GSMUA_Achr3P04370_001	Banana	cytosol	6.32	1.86
GSMUA_Achr9P23740_001	Banana	golgi	18.95	1.72
GSMUA_Achr1P08830_001	Banana	cytosol	16.84	1.65
GSMUA_Achr3P27200_001	Banana	golgi, plasma membrane, vacuole	6.32	1.62
GSMUA_Achr8P10190_001	Banana	cytosol, plastid	0.0	0.0
GSMUA_AchrUn_...	Banana	cytosol, nucleus, plastid	0.0	0.0
GSMUA_Achr8P10200_001	Banana	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr8P10210_001	EnsemblPlants:GSMUA_Achr8T10210_001	EnsemblPlantsGene:GSMUA_Achr8G10210_001	Gene3D:2.130.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat
InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	PANTHER:PTHR19923	PFscan:PS50082	PFscan:PS50294	SUPFAM:SSF50978
UniParc:UPI000295C2BB	UniProt:M0TP74	MapMan:35.1	:	:	:

Description

Protein pleiotropic regulatory locus 1 [Source:GMGC_GENE;Acc:GSMUA_Achr8G10210_001]

Coordinates

chr8:+:7285830..7286397

Molecular Weight (calculated)

10727.4 Da

IEP (calculated)

4.749

GRAVY (calculated)

-0.598

Length

95 amino acids

Sequence
(BLAST)

1: MAVNEDGVLA TAGDNGSLWF WDWKSGHNFQ QAQTIVQPGS LDSEACIYAL SYDISGSRLV TCEADKTIKM WKEDQSATPE THPLNFKPPK EFRRY

Best Arabidopsis Sequence Match ( AT4G15900.1 )
(BLAST)

001: MPAPTTEIEP IEAQSLKKLS LKSLKRSLEL FSPVHGQFPP PDPEAKQIRL SHKMKVAFGG VEPVVSQPPR QPDRINEQPG PSNALSLAAP EGSKSTQKGA
101: TESAIVVGPT LLRPILPKGL NYTGSSGKST TIIPANVSSY QRNLSTAALM ERIPSRWPRP EWHAPWKNYR VIQGHLGWVR SVAFDPSNEW FCTGSADRTI
201: KIWDVATGVL KLTLTGHIEQ VRGLAVSNRH TYMFSAGDDK QVKCWDLEQN KVIRSYHGHL SGVYCLALHP TLDVLLTGGR DSVCRVWDIR TKMQIFALSG
301: HDNTVCSVFT RPTDPQVVTG SHDTTIKFWD LRYGKTMSTL THHKKSVRAM TLHPKENAFA SASADNTKKF SLPKGEFCHN MLSQQKTIIN AMAVNEDGVM
401: VTGGDNGSIW FWDWKSGHSF QQSETIVQPG SLESEAGIYA ACYDNTGSRL VTCEADKTIK MWKEDENATP ETHPINFKPP KEIRRF

Arabidopsis Description

PRL1Protein pleiotropic regulatory locus 1 [Source:UniProtKB/Swiss-Prot;Acc:Q42384]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.