Factsheet for HORVU3Hr1G035450.7

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G081310.4
HORVU1Hr1G094530.1
HORVU3Hr1G030600.8
HORVU3Hr1G034750.5
HORVU3Hr1G050820.11
HORVU3Hr1G069190.1
HORVU5Hr1G080010.3
HORVU5Hr1G103580.2
HORVU5Hr1G108630.3
HORVU7Hr1G056610.1
HORVU7Hr1G056620.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G15900.1	HORVU5Hr1G080010.3	AT1G09770.1	17575050
AT4G15900.1	HORVU5Hr1G108630.3	AT1G09770.1	17575050
AT4G15900.1	HORVU1Hr1G081310.4	AT3G29160.1	10220464
AT4G15900.1	HORVU3Hr1G069190.1	AT3G29160.1	10220464
AT4G15900.1	HORVU3Hr1G034750.5	AT4G02150.1	9765207
AT4G15900.1	HORVU1Hr1G094530.1	AT4G05420.1	18223036
AT4G15900.1	HORVU3Hr1G050820.11	AT4G05420.1	18223036
AT4G15900.1	HORVU7Hr1G056610.1	AT4G05420.1	18223036
AT4G15900.1	HORVU7Hr1G056620.1	AT4G05420.1	18223036
AT4G15900.1	HORVU5Hr1G103580.2	AT5G46210.1	18223036
AT4G15900.1	HORVU3Hr1G030600.8	AT5G58720.1	10220464

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G181100.1	Wheat	cytosol	85.94	91.86
TraesCS3A01G175600.2	Wheat	plastid	85.16	91.21
TraesCS3B01G205300.1	Wheat	cytosol	85.16	91.02
GSMUA_Achr8P10210_001	Banana	cytosol	16.8	90.53
GSMUA_Achr8P10200_001	Banana	cytosol	15.62	89.89
Os03t0339100-01	Rice	nucleus	78.12	84.75
KXG25821	Sorghum	cytosol	78.91	84.34
Zm00001d033309_P003	Maize	cytosol	78.12	82.82
CDY27174	Canola	cytosol	23.05	77.12
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome, plastid	70.12	73.87
PGSC0003DMT400023040	Potato	mitochondrion	43.16	71.99
KRH12069	Soybean	nucleus	66.8	71.85
VIT_05s0077g02310.t01	Wine grape	cytosol	67.38	71.28
KRH37088	Soybean	nucleus	66.21	71.07
Bra012753.1-P	Field mustard	cytosol	65.23	69.44
AT4G15900.1	Thale cress	cytosol	65.04	68.52
CDY44171	Canola	cytosol	20.51	67.74
Bra007287.1-P	Field mustard	cytosol	51.56	66.0
AT3G16650.1	Thale cress	cytosol	60.94	65.14
Solyc09g010620.1.1	Tomato	cytosol	20.12	63.19
Bra021188.1-P	Field mustard	cytosol	59.77	61.57
GSMUA_Achr8P10190_001	Banana	cytosol, plastid	29.1	53.99
HORVU4Hr1G009500.1	Barley	cytosol, plastid	14.65	21.61
HORVU6Hr1G063000.1	Barley	cytosol	13.28	21.38
HORVU2Hr1G041020.2	Barley	cytosol, plastid	14.45	20.56
HORVU0Hr1G027010.1	Barley	plastid	13.28	18.94
HORVU3Hr1G013230.4	Barley	cytosol	14.45	18.5
HORVU7Hr1G111780.2	Barley	cytosol, plastid	12.5	18.5
HORVU1Hr1G095080.1	Barley	cytosol, plastid	16.8	17.1
HORVU2Hr1G022250.4	Barley	mitochondrion	14.45	14.92
HORVU5Hr1G094540.7	Barley	cytosol, mitochondrion, nucleus	13.28	13.2
HORVU5Hr1G077690.1	Barley	cytosol, mitochondrion, plastid, vacuole	13.48	9.16
HORVU1Hr1G061600.22	Barley	cytosol	14.26	8.99
HORVU5Hr1G075920.16	Barley	nucleus	12.89	8.98
HORVU3Hr1G076760.7	Barley	cytosol, mitochondrion, nucleus	15.04	7.98

Protein Annotations

MapMan:16.4.5.1.3	Gene3D:2.130.10.10	UniProt:A0A287KRB1	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:HORVU3Hr1G035450	EnsemblPlants:HORVU3Hr1G035450.7	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986
PFAM:PF00400	PRINTS:PR00320	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR19923
SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI000B48926D	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS
InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:197506349..197511600

Molecular Weight (calculated)

56150.7 Da

IEP (calculated)

9.766

GRAVY (calculated)

-0.430

Length

512 amino acids

Sequence
(BLAST)

001: MSPARFLSRP ALRTVSNTVT SSELSRRSAA GGYGDGGGIS GQRAGRAAVV EEAEPEVAET FPRPLRAHPL PPLRSRRRES KQIRVSCKVN AEYGAVKNLP
101: SDQGRAQGKG AAAPSNALAL LGTQDTKDAP REGTSNAIIP APLMLPKVPE SAVPGKNTTA LSIPGSSDRF STSALMERLP SRWPKPVWHA PWKNYRVISG
201: HLGWVRSIAF DPGNEWFCTG SADRTIKIWD LASGTLKLTL TGHIEQVRGL AVSQRHTYLF SAGDDKQVKC WDLEQNKVIR SYHGHLSGVY CLALHPTIDV
301: LLTGGRDSVC RVWDIRTKAH VSALTGHDNT VCSVFARPTD PQVVTGSHDT TIKFWDLVAG KTMCTLTHHK KSVRAMALHP KEKSFASASA DNIKKWSLPK
401: GEFLHNMLSQ QKTILNAMAV NEDGVLATAG DNGSMWFWDW KSGHNFQQEQ TIVQPGSLES EACIYALSYD NSGSRLVTCE ADKTIKMWKE DLTATPETHP
501: VNFKPPKDIR RY

Best Arabidopsis Sequence Match ( AT4G15900.1 )
(BLAST)

001: MPAPTTEIEP IEAQSLKKLS LKSLKRSLEL FSPVHGQFPP PDPEAKQIRL SHKMKVAFGG VEPVVSQPPR QPDRINEQPG PSNALSLAAP EGSKSTQKGA
101: TESAIVVGPT LLRPILPKGL NYTGSSGKST TIIPANVSSY QRNLSTAALM ERIPSRWPRP EWHAPWKNYR VIQGHLGWVR SVAFDPSNEW FCTGSADRTI
201: KIWDVATGVL KLTLTGHIEQ VRGLAVSNRH TYMFSAGDDK QVKCWDLEQN KVIRSYHGHL SGVYCLALHP TLDVLLTGGR DSVCRVWDIR TKMQIFALSG
301: HDNTVCSVFT RPTDPQVVTG SHDTTIKFWD LRYGKTMSTL THHKKSVRAM TLHPKENAFA SASADNTKKF SLPKGEFCHN MLSQQKTIIN AMAVNEDGVM
401: VTGGDNGSIW FWDWKSGHSF QQSETIVQPG SLESEAGIYA ACYDNTGSRL VTCEADKTIK MWKEDENATP ETHPINFKPP KEIRRF

Arabidopsis Description

PRL1Protein pleiotropic regulatory locus 1 [Source:UniProtKB/Swiss-Prot;Acc:Q42384]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.