Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G056620.1 | Barley | cytosol | 10.34 | 100.0 |
| TraesCS3A01G210100.2 | Wheat | nucleus | 86.4 | 89.97 |
| TraesCS3B01G240600.1 | Wheat | cytosol | 81.98 | 89.75 |
| HORVU7Hr1G056610.1 | Barley | cytosol | 14.31 | 81.41 |
| CDY70585 | Canola | plastid | 21.55 | 68.73 |
| KRH59213 | Soybean | cytosol, plasma membrane, plastid | 30.21 | 68.4 |
| GSMUA_Achr8P07200_001 | Banana | cytosol, nucleus, plasma membrane | 65.72 | 68.32 |
| HORVU1Hr1G094530.1 | Barley | nucleus, plastid | 68.37 | 67.66 |
| VIT_10s0003g04360.t01 | Wine grape | cytosol, nucleus, plasma membrane | 64.31 | 66.85 |
| AT4G05420.1 | Thale cress | cytosol, nucleus, peroxisome | 63.78 | 66.36 |
| KRH25071 | Soybean | nucleus | 34.98 | 66.33 |
| Solyc02g021650.2.1 | Tomato | nucleus | 64.05 | 66.21 |
| Bra029577.1-P | Field mustard | nucleus, peroxisome, plastid | 63.34 | 66.02 |
| AT4G21100.1 | Thale cress | nucleus | 62.54 | 65.07 |
| CDY69930 | Canola | plastid | 26.77 | 64.61 |
| CDY69266 | Canola | nucleus | 31.27 | 64.6 |
| CDY68484 | Canola | cytosol, endoplasmic reticulum, vacuole | 30.48 | 64.49 |
| CDY57060 | Canola | cytosol, nucleus, plasma membrane | 62.1 | 63.74 |
| KRH59212 | Soybean | cytosol, nucleus | 29.95 | 63.6 |
| CDX76416 | Canola | cytosol | 61.48 | 61.7 |
| KRH43086 | Soybean | nucleus | 10.95 | 61.08 |
| Bra020884.1-P | Field mustard | cytosol | 61.48 | 54.29 |
| PGSC0003DMT400009595 | Potato | nucleus | 9.81 | 42.53 |
| CDY50606 | Canola | golgi, mitochondrion, plasma membrane | 11.84 | 42.41 |
| CDY54326 | Canola | cytosol | 7.16 | 35.37 |
| HORVU6Hr1G019130.1 | Barley | mitochondrion | 21.38 | 19.72 |
| HORVU2Hr1G055870.14 | Barley | plastid | 18.55 | 15.44 |
Protein Annotations
| MapMan:14.6.1.3.1 | MapMan:19.2.2.8.3.2 | Gene3D:2.130.10.10 | MapMan:26.1.1.3.2 | Gene3D:3.30.980.30 | UniProt:A0A287L0X0 |
| InterPro:Cleavage/polyA-sp_fac_asu_C | ncoils:Coil | InterPro:DDB1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006259 | GO:GO:0006281 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| EnsemblPlantsGene:HORVU3Hr1G050820 | EnsemblPlants:HORVU3Hr1G050820.11 | InterPro:IPR015943 | PFAM:PF03178 | PFAM:PF10433 | PANTHER:PTHR10644 |
| PANTHER:PTHR10644:SF3 | SUPFAM:SSF50978 | UniParc:UPI000B488630 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat_dom_sf | SEG:seg |
Description
No Description!
Coordinates
chrchr3H:+:365115094..365137559
Molecular Weight (calculated)
126354.0 Da
IEP (calculated)
6.782
GRAVY (calculated)
-0.021
Length
1132 amino acids
Sequence
(BLAST)
(BLAST)
0001: KNPGRIPAPN SHGPTTAPPP PPCSLWSRSP RSSLLSGAAA RGVRRGCFCG RRGTMRAWNY VVTAHKPTAV SHSCVGNFTA PHQLNLIVAK CNHIEIYMLT
0101: PQGLQLMLEV PLYGTLATLE LFRSRSETQD FLFIGMERYR YCVLQWDGGK SELLTRSEGD VSEFFGRPTD NGQIGIIDRR YRLIGLHLYD GLFKVIPFDN
0201: KGHLKEALNI RLEELVVLDI KFLYRCENPT VVVLYQDNND ARHIKTYEIA LEDKKFVEGS WSQNNLDNCA RLLIPVPLGG VIIVGEDTIV YCSSTTIKSL
0301: SIKQSIIRAV ELVDPYGSRY LYGDSTGALH FLVITHESGR VTGLKSRFIG ETSIASTISY LGSGFVYIGS QFGDSQLLKL NTQADASGSF VKILEQYMNI
0401: GPIVDLCVVD FERQGQGQVI TCSGAYKDGS IRAIRNELVI TDQASLQLHG MKGLWSLKCS SNDPYDTFLV VTFINKTRFL AINKENELVE TPIEGFVSET
0501: QTLVCGTAIH NQLIQVTAQS VRLVSSTSRD LLDQWFAPTG FPVNVAAANA CQVLLATGGF HLIYLEITSS KLVEVKHVEL EHAISCLDIN PIGESPQHSS
0601: LAAVGMWTDT SVRIFSLPGL ELIRKENLGE AVPRSVLLCT IEEVSYLFCA LGDGHLFSFV FNISTCELSD RSRVCLGTQP ISLYKYSSHN RTRVFAASDR
0701: PTIIYSRDKK LLYSYVNLKE MNHVCSFNTV IFPESIAIAK EAELSIGAIT DFRKPHIHTI PLNEHARRIC HQERSQTLAL CSFKNKDMHA VSETHFVRLL
0801: DHQTFGFLST HTLDSFECGC SIISCSFSGD DNFYYCVGTA YVLPMEDEPT KGRILVFLVE EGKLQLITAK ETKGAVYSLK AFNGKLLAAI NQKIRLYKWV
0901: QRDDRSHVLQ FECAHDGRVL SLYTQTRGDF ILVGDMMRSL SLLMYKHEEG EIEEVARDLN TNWMTAVEML DDDIFIGADK CCNLFTVFKS PYGWLEPVGE
1001: YHLGDVVNRL HHGSLVMHHT DSETGQFPTV IFGTVNGAIG VIASLPSDLY VFLEKLQSVL ANFVKGVGNL SHAEWRSFHN ARRISYARNF VDGDLIESFL
1101: SLSPSHMVEV AWAMGVPAVD LYKKVQELTK LH
0101: PQGLQLMLEV PLYGTLATLE LFRSRSETQD FLFIGMERYR YCVLQWDGGK SELLTRSEGD VSEFFGRPTD NGQIGIIDRR YRLIGLHLYD GLFKVIPFDN
0201: KGHLKEALNI RLEELVVLDI KFLYRCENPT VVVLYQDNND ARHIKTYEIA LEDKKFVEGS WSQNNLDNCA RLLIPVPLGG VIIVGEDTIV YCSSTTIKSL
0301: SIKQSIIRAV ELVDPYGSRY LYGDSTGALH FLVITHESGR VTGLKSRFIG ETSIASTISY LGSGFVYIGS QFGDSQLLKL NTQADASGSF VKILEQYMNI
0401: GPIVDLCVVD FERQGQGQVI TCSGAYKDGS IRAIRNELVI TDQASLQLHG MKGLWSLKCS SNDPYDTFLV VTFINKTRFL AINKENELVE TPIEGFVSET
0501: QTLVCGTAIH NQLIQVTAQS VRLVSSTSRD LLDQWFAPTG FPVNVAAANA CQVLLATGGF HLIYLEITSS KLVEVKHVEL EHAISCLDIN PIGESPQHSS
0601: LAAVGMWTDT SVRIFSLPGL ELIRKENLGE AVPRSVLLCT IEEVSYLFCA LGDGHLFSFV FNISTCELSD RSRVCLGTQP ISLYKYSSHN RTRVFAASDR
0701: PTIIYSRDKK LLYSYVNLKE MNHVCSFNTV IFPESIAIAK EAELSIGAIT DFRKPHIHTI PLNEHARRIC HQERSQTLAL CSFKNKDMHA VSETHFVRLL
0801: DHQTFGFLST HTLDSFECGC SIISCSFSGD DNFYYCVGTA YVLPMEDEPT KGRILVFLVE EGKLQLITAK ETKGAVYSLK AFNGKLLAAI NQKIRLYKWV
0901: QRDDRSHVLQ FECAHDGRVL SLYTQTRGDF ILVGDMMRSL SLLMYKHEEG EIEEVARDLN TNWMTAVEML DDDIFIGADK CCNLFTVFKS PYGWLEPVGE
1001: YHLGDVVNRL HHGSLVMHHT DSETGQFPTV IFGTVNGAIG VIASLPSDLY VFLEKLQSVL ANFVKGVGNL SHAEWRSFHN ARRISYARNF VDGDLIESFL
1101: SLSPSHMVEV AWAMGVPAVD LYKKVQELTK LH
0001: MSSWNYVVTA HKPTSVTHSC VGNFTSPQEL NLIVAKCTRI EIHLLTPQGL QPMLDVPIYG RIATLELFRP HGEAQDFLFI ATERYKFCVL QWDPESSELI
0101: TRAMGDVSDR IGRPTDNGQI GIIDPDCRLI GLHLYDGLFK VIPFDNKGQL KEAFNIRLEE LQVLDIKFLF GCAKPTIAVL YQDNKDARHV KTYEVSLKDK
0201: DFVEGPWSQN SLDNGADLLI PVPPPLCGVL IIGEETIVYC SASAFKAIPI RPSITKAYGR VDVDGSRYLL GDHAGMIHLL VITHEKEKVT GLKIELLGET
0301: SIASTISYLD NAVVFVGSSY GDSQLVKLNL HPDAKGSYVE VLERYINLGP IVDFCVVDLE RQGQGQVVTC SGAFKDGSLR VVRNGIGINE QASVELQGIK
0401: GMWSLKSSID EAFDTFLVVS FISETRILAM NLEDELEETE IEGFLSQVQT LFCHDAVYNQ LVQVTSNSVR LVSSTTRELR DEWHAPAGFT VNVATANASQ
0501: VLLATGGGHL VYLEIGDGKL TEVQHALLEY EVSCLDINPI GDNPNYSQLA AVGMWTDISV RIFSLPELTL ITKEQLGGEI IPRSVLLCAF EGISYLLCAL
0601: GDGHLLNFQM DTTTGQLKDR KKVSLGTQPI TLRTFSSKSA THVFAASDRP TVIYSSNKKL LYSNVNLKEV SHMCPFNSAA FPDSLAIARE GELTIGTIDD
0701: IQKLHIRTIP LGEHARRICH QEQTRTFGIC SLGNQSNSEE SEMHFVRLLD DQTFEFMSTY PLDSFEYGCS ILSCSFTEDK NVYYCVGTAY VLPEENEPTK
0801: GRILVFIVED GRLQLIAEKE TKGAVYSLNA FNGKLLAAIN QKIQLYKWML RDDGTRELQS ECGHHGHILA LYVQTRGDFI VVGDLMKSIS LLLYKHEEGA
0901: IEERARDYNA NWMSAVEILD DDIYLGAENN FNLLTVKKNS EGATDEERGR LEVVGEYHLG EFVNRFRHGS LVMRLPDSEI GQIPTVIFGT VNGVIGVIAS
1001: LPQEQYTFLE KLQSSLRKVI KGVGGLSHEQ WRSFNNEKRT AEARNFLDGD LIESFLDLSR NKMEDISKSM NVQVEELCKR VEELTRLH
0101: TRAMGDVSDR IGRPTDNGQI GIIDPDCRLI GLHLYDGLFK VIPFDNKGQL KEAFNIRLEE LQVLDIKFLF GCAKPTIAVL YQDNKDARHV KTYEVSLKDK
0201: DFVEGPWSQN SLDNGADLLI PVPPPLCGVL IIGEETIVYC SASAFKAIPI RPSITKAYGR VDVDGSRYLL GDHAGMIHLL VITHEKEKVT GLKIELLGET
0301: SIASTISYLD NAVVFVGSSY GDSQLVKLNL HPDAKGSYVE VLERYINLGP IVDFCVVDLE RQGQGQVVTC SGAFKDGSLR VVRNGIGINE QASVELQGIK
0401: GMWSLKSSID EAFDTFLVVS FISETRILAM NLEDELEETE IEGFLSQVQT LFCHDAVYNQ LVQVTSNSVR LVSSTTRELR DEWHAPAGFT VNVATANASQ
0501: VLLATGGGHL VYLEIGDGKL TEVQHALLEY EVSCLDINPI GDNPNYSQLA AVGMWTDISV RIFSLPELTL ITKEQLGGEI IPRSVLLCAF EGISYLLCAL
0601: GDGHLLNFQM DTTTGQLKDR KKVSLGTQPI TLRTFSSKSA THVFAASDRP TVIYSSNKKL LYSNVNLKEV SHMCPFNSAA FPDSLAIARE GELTIGTIDD
0701: IQKLHIRTIP LGEHARRICH QEQTRTFGIC SLGNQSNSEE SEMHFVRLLD DQTFEFMSTY PLDSFEYGCS ILSCSFTEDK NVYYCVGTAY VLPEENEPTK
0801: GRILVFIVED GRLQLIAEKE TKGAVYSLNA FNGKLLAAIN QKIQLYKWML RDDGTRELQS ECGHHGHILA LYVQTRGDFI VVGDLMKSIS LLLYKHEEGA
0901: IEERARDYNA NWMSAVEILD DDIYLGAENN FNLLTVKKNS EGATDEERGR LEVVGEYHLG EFVNRFRHGS LVMRLPDSEI GQIPTVIFGT VNGVIGVIAS
1001: LPQEQYTFLE KLQSSLRKVI KGVGGLSHEQ WRSFNNEKRT AEARNFLDGD LIESFLDLSR NKMEDISKSM NVQVEELCKR VEELTRLH
Arabidopsis Description
DDB1ADDB1A [Source:UniProtKB/TrEMBL;Acc:A0A178UYD4]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.