Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G630100.1 | Wheat | nucleus | 78.64 | 95.66 |
| TraesCS2A01G566600.1 | Wheat | nucleus | 94.97 | 92.32 |
| TraesCS2D01G576800.1 | Wheat | cytosol | 94.7 | 92.06 |
| Os04t0691200-00 | Rice | cytosol | 27.64 | 80.73 |
| EES13157 | Sorghum | cytosol | 74.31 | 71.71 |
| Zm00001d026691_P004 | Maize | cytosol | 73.17 | 70.65 |
| Zm00001d002933_P014 | Maize | cytosol | 70.52 | 68.56 |
| GSMUA_Achr3P22370_001 | Banana | cytosol | 51.81 | 57.64 |
| GSMUA_Achr7P23160_001 | Banana | plasma membrane, plastid, vacuole | 52.08 | 56.25 |
| Solyc08g074370.2.1 | Tomato | nucleus | 53.0 | 52.1 |
| VIT_04s0008g03060.t01 | Wine grape | cytosol, nucleus, plasma membrane | 55.06 | 51.75 |
| KRH52554 | Soybean | nucleus | 53.16 | 51.12 |
| KRH61892 | Soybean | cytosol | 53.38 | 50.85 |
| CDY36454 | Canola | nucleus | 46.3 | 46.55 |
| CDY13413 | Canola | nucleus | 43.86 | 46.4 |
| CDX72295 | Canola | cytosol, nucleus, plastid | 43.97 | 46.38 |
| CDY23283 | Canola | nucleus | 46.13 | 46.21 |
| AT4G31160.1 | Thale cress | cytosol, nucleus, plasma membrane | 46.57 | 45.72 |
| Bra024021.1-P | Field mustard | nucleus | 43.59 | 44.78 |
| Bra010248.1-P | Field mustard | nucleus | 46.08 | 44.72 |
| KRH16085 | Soybean | cytosol | 17.2 | 44.41 |
| VIT_15s0021g02350.t01 | Wine grape | nucleus | 6.27 | 33.72 |
| CDY03208 | Canola | nucleus | 2.43 | 23.2 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:35.1 | UniProt:A0A287JTL1 | InterPro:ARM-type_fold | GO:GO:0000003 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006464 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009790 | GO:GO:0009791 |
| GO:GO:0009793 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0010154 | GO:GO:0016567 | GO:GO:0019538 |
| GO:GO:0048366 | GO:GO:0048367 | GO:GO:0048827 | EnsemblPlantsGene:HORVU2Hr1G126010 | EnsemblPlants:HORVU2Hr1G126010.3 | InterPro:IPR001680 |
| InterPro:IPR006594 | InterPro:IPR015943 | InterPro:LisH | PFscan:PS50896 | PANTHER:PTHR13129 | SMART:SM00320 |
| SMART:SM00667 | SUPFAM:SSF48371 | SUPFAM:SSF50978 | UniParc:UPI000B481443 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat |
| InterPro:WD40_repeat_dom_sf | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:762356231..762365714
Molecular Weight (calculated)
200890.0 Da
IEP (calculated)
4.911
GRAVY (calculated)
-0.315
Length
1849 amino acids
Sequence
(BLAST)
(BLAST)
0001: SRIVEQETNP NPRLIHTLAT IAEEQEARHL QECASDPSFS NTNTRGSHTI GKLASLIREN DDFYDLVFCK FLSDTSYPLP VRCASARLLL SIQDAFSPQF
0101: PHAFEDGTLE NIKSWIKEDG EASAGCDWKH LRSGKKPTDT EMLRTYAIGL LSMALYGGGR LVEDVLNMGV SAKLMRFLRI RVFGDATSSE KDANPPLDTK
0201: HPRGRDENRG KVRLLQDSSV LDLTRAGDAI STDPTLEKQF DRDVGMRQAH GEQGMDDTVY LQRDDADSTL DPSDAKSADG EKYPAGESLR DELLKRKFSR
0301: TGSRLRGKIK PGESLPESER TPLSPAGLRM GSRASKDKNA TKVEDPKKAT DLNNNSAAPE SDILIISKEE YEDRFRDCII GLKDITEIVL KAVRAAEAEA
0401: RSANAPEEAV KAAGDAAAEL VKSAALEVWK SENSGDAVVL AAEKAADTVV DAAMSTSVSR SSDQVNEEHV VEEAVKISED QDLEDFVIVD QEQLLLLREK
0501: YSILCLQYLG EYVEALGPVL HEKGVDVCLA LLQRGIKDQE RCGHVSLLHE ILRLICALAA HRKFAALFVD RGGIQKILSV PKITQTYGAL SACLFTFGSL
0601: QSTMERVCAL SADILNNVVE LALQLLECPQ DAARKNAAIF FAAAFVFKAV LDSFDAQDGM QKLLNILQVA ASVRSGGNSG ALGSSNANQG NDRSPAEVLT
0701: QSEKQVAYHS CVALRQYFRA HLLQLVDSIR PSKSIRSIAR NTSSARAGYK PFDIGNEAMD AIFRQVQRDR KLGPALVRAR WPVMDKFLAS SGHIILLELC
0801: QSLPTDRYLH DLAQYAFGVL HIITLMPHSR KLMVHATLTN NRIGMAVILD IANSVVGYVD PEVICPALNV LVNLVCPPPS ISNKPSSAVN QQPAGSYSES
0901: RDRNAEKSTS ERNVAANQSE SRERYGDGTP VVSSGVVGDK RISLGVGAGG PGLAAQLEQA YRQAREVVRA NNGIKILLQL LGTRMVTHPM AIDPIRALAC
1001: RVLLGLARDD AIAHILTKLQ VGKKLSELIR DTSTQSSGGD NARWLNELTQ VAIELIAVLT NSGKETTLAT DAAAPALKRI ERAGIAAATP VSYHSRELMQ
1101: LIHEHLLGSG LAATAAMLQK EADLAPLPST AAVLPVHQSA ALEPSSVQVQ QQWPSGRVQG FLSDKTMIAA DQAGQRSDSI VPSSKKKALV FSSSFSKRNQ
1201: PFVSFSGNRA SNSLKSPVPA GNVDSMTCSA SAANTGDAEI PHRTPMPLPL KRKLVDTDFS SASTAKRPAM MDQASQSPVF QTPAPTRRGL SVAVDSPTAA
1301: FHPGRTNFNN ISTENFEDSQ CTPGVVTCTP HLGANDQQTG NLERMTLDSL VVQYLKHQHR QCPAPITTLP PVSLLHPHVC PEPSRSICAP ANVTARMGSR
1401: EISREFSGIQ VPRRDRQFIY SRFKPCRVCR DEASLLTCMT FIGDASRVAA GNHSGELRVF DSNLANLIET HTCHQNLVTM VDSTSVGGTE LILSSSTDEV
1501: KLFDAFSLHS GPLHTFDGCK AAKFNHSGTL FAGLSTNGNH RAVLLYDVQT HNVDMELPDN SSLPGSGRGV QPIIHFSPSD EMLLWNGVLW DRRSPTPIHQ
1601: FDQFTDYCGG GFHPAGNEVI LNSEVWDLRK FKLLRSVPSL DQTVIKFNGS GDVIYAILRR NLEDVTSSIN TRRVRHPLFP AFRTIDAVTY ADIATVQIDR
1701: GVLDLAVEPN DSLLGVVAMD DPDEMFSSAR IFEVGRKRPT DDDSDPEDGG DTEDDDDDDD DSDVDVLLGT DLGLGDTDSE DDPSNSSGDD DGGDDEDEDM
1801: DSGDENDDDD EEGDFDVGGD LLDFIGAGEG DESDMIESFS SGEEEGWLM
0101: PHAFEDGTLE NIKSWIKEDG EASAGCDWKH LRSGKKPTDT EMLRTYAIGL LSMALYGGGR LVEDVLNMGV SAKLMRFLRI RVFGDATSSE KDANPPLDTK
0201: HPRGRDENRG KVRLLQDSSV LDLTRAGDAI STDPTLEKQF DRDVGMRQAH GEQGMDDTVY LQRDDADSTL DPSDAKSADG EKYPAGESLR DELLKRKFSR
0301: TGSRLRGKIK PGESLPESER TPLSPAGLRM GSRASKDKNA TKVEDPKKAT DLNNNSAAPE SDILIISKEE YEDRFRDCII GLKDITEIVL KAVRAAEAEA
0401: RSANAPEEAV KAAGDAAAEL VKSAALEVWK SENSGDAVVL AAEKAADTVV DAAMSTSVSR SSDQVNEEHV VEEAVKISED QDLEDFVIVD QEQLLLLREK
0501: YSILCLQYLG EYVEALGPVL HEKGVDVCLA LLQRGIKDQE RCGHVSLLHE ILRLICALAA HRKFAALFVD RGGIQKILSV PKITQTYGAL SACLFTFGSL
0601: QSTMERVCAL SADILNNVVE LALQLLECPQ DAARKNAAIF FAAAFVFKAV LDSFDAQDGM QKLLNILQVA ASVRSGGNSG ALGSSNANQG NDRSPAEVLT
0701: QSEKQVAYHS CVALRQYFRA HLLQLVDSIR PSKSIRSIAR NTSSARAGYK PFDIGNEAMD AIFRQVQRDR KLGPALVRAR WPVMDKFLAS SGHIILLELC
0801: QSLPTDRYLH DLAQYAFGVL HIITLMPHSR KLMVHATLTN NRIGMAVILD IANSVVGYVD PEVICPALNV LVNLVCPPPS ISNKPSSAVN QQPAGSYSES
0901: RDRNAEKSTS ERNVAANQSE SRERYGDGTP VVSSGVVGDK RISLGVGAGG PGLAAQLEQA YRQAREVVRA NNGIKILLQL LGTRMVTHPM AIDPIRALAC
1001: RVLLGLARDD AIAHILTKLQ VGKKLSELIR DTSTQSSGGD NARWLNELTQ VAIELIAVLT NSGKETTLAT DAAAPALKRI ERAGIAAATP VSYHSRELMQ
1101: LIHEHLLGSG LAATAAMLQK EADLAPLPST AAVLPVHQSA ALEPSSVQVQ QQWPSGRVQG FLSDKTMIAA DQAGQRSDSI VPSSKKKALV FSSSFSKRNQ
1201: PFVSFSGNRA SNSLKSPVPA GNVDSMTCSA SAANTGDAEI PHRTPMPLPL KRKLVDTDFS SASTAKRPAM MDQASQSPVF QTPAPTRRGL SVAVDSPTAA
1301: FHPGRTNFNN ISTENFEDSQ CTPGVVTCTP HLGANDQQTG NLERMTLDSL VVQYLKHQHR QCPAPITTLP PVSLLHPHVC PEPSRSICAP ANVTARMGSR
1401: EISREFSGIQ VPRRDRQFIY SRFKPCRVCR DEASLLTCMT FIGDASRVAA GNHSGELRVF DSNLANLIET HTCHQNLVTM VDSTSVGGTE LILSSSTDEV
1501: KLFDAFSLHS GPLHTFDGCK AAKFNHSGTL FAGLSTNGNH RAVLLYDVQT HNVDMELPDN SSLPGSGRGV QPIIHFSPSD EMLLWNGVLW DRRSPTPIHQ
1601: FDQFTDYCGG GFHPAGNEVI LNSEVWDLRK FKLLRSVPSL DQTVIKFNGS GDVIYAILRR NLEDVTSSIN TRRVRHPLFP AFRTIDAVTY ADIATVQIDR
1701: GVLDLAVEPN DSLLGVVAMD DPDEMFSSAR IFEVGRKRPT DDDSDPEDGG DTEDDDDDDD DSDVDVLLGT DLGLGDTDSE DDPSNSSGDD DGGDDEDEDM
1801: DSGDENDDDD EEGDFDVGGD LLDFIGAGEG DESDMIESFS SGEEEGWLM
0001: MDGQEHAEVP NSMVEDDQSV VAAEAIAELA NSTGEPNPEE GEEQSVEDEL IAKAQKLMED ITSVANNPNP NILHALSQLL ESQESLFLEE NGHFSNARGS
0101: HNSGKLCILI RENDEFFELI SSTFLSENSY STAVKAASAR LLMNCSLTWM YPHVFDDAVT ENFKNWVMEE AVKFPGEDSA KKEASDFEML KTYSTGLLAL
0201: SLASRGQIVE DVLTSGLSAK LMHYLRVRVL KEPSTSRIHT TETKHVSLKT KEEGRSRVRK IVDTVEGDHV LETDSGREMG QTDVQPDGEF EIDGRDVFNV
0301: SGVVDCKIKP GDDNSVRDDP SRHRLNRSKS RGRGRVHEGA PDTEVLLASP RLGRLLVRDR DLSKISDGRN AEDVTVCLGK MKSGIMEIER EDNDECFQGC
0401: IIGTKNITDL VKRAVGAAET EARAAHAPDD AAKAAGDAAA ELVKTAALEE FKSSGSEEAA VSAATRAAIT VIDAAEVSRN PTCVTSDQTT DVSEVSLPDI
0501: ESLAQLQEKY CIQCLEILGE YVEVLGPVLH EKGVDVCIVL LERTSQLDDR STVSPLLPDV MKLICALAAH RKFAAMFVER RGILKLLAVP RVSETFYGLS
0601: SCLYTIGSLQ GIMERVCALP LVVIHQVVKL AIELLDCSQD QARKNSALFF AAAFVFRAIL DAFDAQDSLQ KLLAILKDAA SVRTGANTDR SAPEVMTSSE
0701: KQMAFHTCFA LRQYFRAHLL LLVDSIRPSR ISRGGVPSSM KPNIRAAYKP LDISNEAVDA IFLQLQKDRR LGPTFVKAQW PAVNNFLASS GHVTMLELCQ
0801: TPPVDRYLHD LLQYAFGVLH IVTSIPDGRK AIAHATLSNN RAGIAVILDA ANISNSIVDP EIIQPALNVL INLVCPPPSL SNKPPLAQNH QPVPGQATTR
0901: PSTDVAVGTQ STGNAPQTPV APASSGLVGD RRIFLGAGTG SAGLAAKLEQ VYRQAREAVR GNDGIKILLK LLQPRIYVNP PATPDCLRAL ACRVLLGLAR
1001: DDTIAQILTK LEVGKSLSEL IRDSGGQSSG TDQGRWQAEL AQVALELIGI VTNSGHATTL TASDAATPTL RRIERAAIAA ATPITYDSKE LLLLIHEHLQ
1101: ASGLGDTASA LLKEAQLTPL PSSASPSSIA YSTTQEMSTP LAQEQWPSGR ANSGFFTSKP KVCAHDEDPN SRSNAALSAK KKHLASSTLE MPTPVAQQQW
1201: PSGRANCGFC PSIPKINARD EDPSSRGNAA PSAKKKQLTF SPSFSSQSRK QSFSHDALPQ STQRINCCSN SDPALADTSE TAAELVLKND LDADAQFKTP
1301: ISFPRKRKLS ELRDSSVPGK RIDLGERRNS TFADGSGLQT PASALDANQS GSSRLGQMTP ASQLRLPSDP QPSNPERLSL DSLVVQYLKH QHRQCLAPIT
1401: TLPPVSLLHP HVCPEPKRLL EAPLNMTGRL GTRELQSFYS GVHGNRRDRQ FVFSRFKSWR SFRDETALFT CIALLGGTNH IAVGSHAGEI KIFEASSGSM
1501: LESVSGHQAP VTLVQPYVSR DTQLLLSSSS SDVQLWDASS ITGGPRHSFD GCKAAKFSNS GLQFAALSCE ASRKDVLLYD VQTCSPCQKL TDTVTSSRSN
1601: PYSLVHFSPC DTLILWNGVL WDRRIPEKVR RFDQFTDYGG GGFHPSRNEV IINSEIWDMR TFKLLRSVPS LDQTAITFNS RGDVIYAMLR RNIEDVMSAV
1701: HTRRVKHPLF AAFRTLDAIN YSDIATIPVD RCLLDFATEP TDSFLGLITM EDQEDMFSSA RMYEIGRRRP TDDDSDPDDD DETEDEDEDD EEEDDLDRIL
1801: GLAGDNSDSG DDDLSSEDNE DSVSDFDEEA DILIDGDFME ELIEGENEDD GNGEDEDDDD DGEMQDFMSS GEEDDYRDNI RSS
0101: HNSGKLCILI RENDEFFELI SSTFLSENSY STAVKAASAR LLMNCSLTWM YPHVFDDAVT ENFKNWVMEE AVKFPGEDSA KKEASDFEML KTYSTGLLAL
0201: SLASRGQIVE DVLTSGLSAK LMHYLRVRVL KEPSTSRIHT TETKHVSLKT KEEGRSRVRK IVDTVEGDHV LETDSGREMG QTDVQPDGEF EIDGRDVFNV
0301: SGVVDCKIKP GDDNSVRDDP SRHRLNRSKS RGRGRVHEGA PDTEVLLASP RLGRLLVRDR DLSKISDGRN AEDVTVCLGK MKSGIMEIER EDNDECFQGC
0401: IIGTKNITDL VKRAVGAAET EARAAHAPDD AAKAAGDAAA ELVKTAALEE FKSSGSEEAA VSAATRAAIT VIDAAEVSRN PTCVTSDQTT DVSEVSLPDI
0501: ESLAQLQEKY CIQCLEILGE YVEVLGPVLH EKGVDVCIVL LERTSQLDDR STVSPLLPDV MKLICALAAH RKFAAMFVER RGILKLLAVP RVSETFYGLS
0601: SCLYTIGSLQ GIMERVCALP LVVIHQVVKL AIELLDCSQD QARKNSALFF AAAFVFRAIL DAFDAQDSLQ KLLAILKDAA SVRTGANTDR SAPEVMTSSE
0701: KQMAFHTCFA LRQYFRAHLL LLVDSIRPSR ISRGGVPSSM KPNIRAAYKP LDISNEAVDA IFLQLQKDRR LGPTFVKAQW PAVNNFLASS GHVTMLELCQ
0801: TPPVDRYLHD LLQYAFGVLH IVTSIPDGRK AIAHATLSNN RAGIAVILDA ANISNSIVDP EIIQPALNVL INLVCPPPSL SNKPPLAQNH QPVPGQATTR
0901: PSTDVAVGTQ STGNAPQTPV APASSGLVGD RRIFLGAGTG SAGLAAKLEQ VYRQAREAVR GNDGIKILLK LLQPRIYVNP PATPDCLRAL ACRVLLGLAR
1001: DDTIAQILTK LEVGKSLSEL IRDSGGQSSG TDQGRWQAEL AQVALELIGI VTNSGHATTL TASDAATPTL RRIERAAIAA ATPITYDSKE LLLLIHEHLQ
1101: ASGLGDTASA LLKEAQLTPL PSSASPSSIA YSTTQEMSTP LAQEQWPSGR ANSGFFTSKP KVCAHDEDPN SRSNAALSAK KKHLASSTLE MPTPVAQQQW
1201: PSGRANCGFC PSIPKINARD EDPSSRGNAA PSAKKKQLTF SPSFSSQSRK QSFSHDALPQ STQRINCCSN SDPALADTSE TAAELVLKND LDADAQFKTP
1301: ISFPRKRKLS ELRDSSVPGK RIDLGERRNS TFADGSGLQT PASALDANQS GSSRLGQMTP ASQLRLPSDP QPSNPERLSL DSLVVQYLKH QHRQCLAPIT
1401: TLPPVSLLHP HVCPEPKRLL EAPLNMTGRL GTRELQSFYS GVHGNRRDRQ FVFSRFKSWR SFRDETALFT CIALLGGTNH IAVGSHAGEI KIFEASSGSM
1501: LESVSGHQAP VTLVQPYVSR DTQLLLSSSS SDVQLWDASS ITGGPRHSFD GCKAAKFSNS GLQFAALSCE ASRKDVLLYD VQTCSPCQKL TDTVTSSRSN
1601: PYSLVHFSPC DTLILWNGVL WDRRIPEKVR RFDQFTDYGG GGFHPSRNEV IINSEIWDMR TFKLLRSVPS LDQTAITFNS RGDVIYAMLR RNIEDVMSAV
1701: HTRRVKHPLF AAFRTLDAIN YSDIATIPVD RCLLDFATEP TDSFLGLITM EDQEDMFSSA RMYEIGRRRP TDDDSDPDDD DETEDEDEDD EEEDDLDRIL
1801: GLAGDNSDSG DDDLSSEDNE DSVSDFDEEA DILIDGDFME ELIEGENEDD GNGEDEDDDD DGEMQDFMSS GEEDDYRDNI RSS
Arabidopsis Description
DCAF1DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M086]
SUBAcon: [cytosol,nucleus,plasma membrane]
SUBAcon: [cytosol,nucleus,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.