Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13413 | Canola | nucleus | 92.01 | 92.28 |
| CDY23283 | Canola | nucleus | 82.49 | 78.33 |
| CDY36454 | Canola | nucleus | 82.09 | 78.25 |
| AT4G31160.1 | Thale cress | cytosol, nucleus, plasma membrane | 80.6 | 75.04 |
| CDY03208 | Canola | nucleus | 6.96 | 62.89 |
| KRH52554 | Soybean | nucleus | 60.41 | 55.07 |
| VIT_04s0008g03060.t01 | Wine grape | cytosol, nucleus, plasma membrane | 60.64 | 54.04 |
| KRH61892 | Soybean | cytosol | 59.73 | 53.94 |
| Solyc08g074370.2.1 | Tomato | nucleus | 56.25 | 52.42 |
| GSMUA_Achr3P22370_001 | Banana | cytosol | 48.26 | 50.9 |
| KRH16085 | Soybean | cytosol | 20.48 | 50.14 |
| GSMUA_Achr7P23160_001 | Banana | plasma membrane, plastid, vacuole | 47.92 | 49.07 |
| Os04t0691200-00 | Rice | cytosol | 17.28 | 47.87 |
| TraesCS2B01G630100.1 | Wheat | nucleus | 40.73 | 46.97 |
| HORVU2Hr1G126010.3 | Barley | cytosol | 46.38 | 43.97 |
| EES13157 | Sorghum | cytosol | 48.03 | 43.95 |
| Zm00001d026691_P004 | Maize | cytosol | 47.52 | 43.5 |
| TraesCS2A01G566600.1 | Wheat | nucleus | 47.18 | 43.48 |
| Zm00001d002933_P014 | Maize | cytosol | 47.01 | 43.32 |
| TraesCS2D01G576800.1 | Wheat | cytosol | 46.95 | 43.27 |
| VIT_15s0021g02350.t01 | Wine grape | nucleus | 7.19 | 36.63 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:35.1 | InterPro:ARM-type_fold | EnsemblPlants:CDX72295 | ProteinID:CDX72295 | ProteinID:CDX72295.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00099776001 | InterPro:IPR001680 | InterPro:IPR006594 |
| InterPro:IPR015943 | InterPro:LisH | PFAM:PF08513 | PFscan:PS50896 | PANTHER:PTHR13129 | SMART:SM00320 |
| SMART:SM00667 | SUPFAM:SSF48371 | SUPFAM:SSF50978 | UniPathway:UPA00143 | UniParc:UPI0004EE3F7D | InterPro:WD40/YVTN_repeat-like_dom_sf |
| InterPro:WD40_repeat | InterPro:WD40_repeat_dom_sf | SEG:seg | : | : | : |
Description
BnaC07g43170D
Coordinates
chrLK031796:+:503977..511006
Molecular Weight (calculated)
190385.0 Da
IEP (calculated)
5.804
GRAVY (calculated)
-0.226
Length
1753 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDEQGHDAEV RNPTAVTAET ENSIGGADHE EGQQEEEEED EVTAIAAEVE EEDELIEKAQ KLMDSITAGA NNPNPTILHA LSHILESKES LFVKESEFYS
0101: NDRSNHISGN LCNLIRENDE FFELISSNFL TEDTYSTAAK AASVRLLVNC SLTSMYPYVF DDAVMDKFKN WVLDESVKFP GEHSGSKEAS DAEMLKTYST
0201: GLLAISLTSR GQLVEDVLAS GLSAKLMHYL RVRVIGDSST SRRDALHTTE AKHVSFKGKE EGRGRVRRVV DTVEGDHVLE ADFGREMGQS EGEFEIDGNV
0301: SAVVDCKLKP GDENTGRDDP SRQRMNRSKS RGRGKVNEGA TDTDVLLTSP RSIRLGVRDR DLPKNSDVRN AEDVTLCLGK MKSGIVGIER DENDECFQGC
0401: WVGTKNITDL VKRAIGAAET EARAAHAPDD AAKAAGDAAA ELVKTAALEA CFYFEFKSSG SEEAAVSAAV RAATTVIDAA EVSRNPTCVI SDQTAELNSV
0501: ETDAIAEVGE VSLPDMESLA QLQEKYCIQC LEILGEYVEV LGPVLHEKGV DVCITLLERT SQLGDGFSPL LRDVMKLICA LAAHRKFAAM FVDRGGLQKL
0601: LAVPRVTETF YGLSSCLYTI GSLQGIMERV CALPSDLIHQ LVKLAIELID CSQDQARKNA ALFFAAAFVF RAILDAFDAH NSLQKLLSIL KDAASVRTGA
0701: NSDRSAPEVM TSSEKQMAFH TCFALRQYFR AHLLLLVDSI RPSRSGRGGV RNVPNVRAAY KPLDISNEAV DAVFHQLHKD RKLGPTFVRT QWPAVNNFLA
0801: SSGHVTMLEL CQTPPVDRYL HDLLQHAFGV LHIVTSIPDG RKAIVSATLS NNRAGIAVVL DAANISNSIV DPEIIQPALN VLINLVCPPP SLSNKPPLAQ
0901: NHQPVSGQAT ARPSTDAAAD TQSTGNAPPT PVAPASSGLV GDRRIFLGAG TGSAGLAAKL EQVYRLAREA VRGNDGIKIL LKLLQPRIYV NAPAAPDCLR
1001: ALACRVLLGL ARDETIAQIL TKLEVGKSLS ELIRDAGSQS SGTDQVRWQA ELAQVALELI GILTNSGHAN TLTASEAATP TLRRIERAAI AAATPITYDS
1101: KELLLLIHEH LQASGLGETA SALLKETQLS PLPSLAPPSS IAFSATQEMP APVQQWPSGR ASGGFFPSKL KVNTHEEDPS LIGNAAPSAK KKQLTFSPSF
1201: SLQSRNQTFP QDAHPQSTQR IDSSSSNSDP ACADTSKTAA ELVLKSDIDA DSQFKTPTFP RKRKLSELKD PDVSVSGKRI NLGELGPPSP ACRTTASFRR
1301: SSTIADASGL QTPASALDVN QSGSSRLGLM TPASQLRLPS DPQPSNTERL TLDSLVVQYL KHQHRQCLAP ITTLPPVSLL HPHVCPEPKR LLEAPLNVTG
1401: RLGTRELQSF YSGVHGSRRD RQFVFSRFKS WRSCRDENAL FTCISLLGGT NHLAVGSHAG EIKIFDASSC SLLESFSGHQ APVTLVQPYV SGDTQLLLSS
1501: SSSDVQLWDA SYITNGSKHS FDGCKAAKFS NSGRYFAALS CEGSTKDVLL YNVESCTLSH KYTDTSTSSR SSPYSLVHFS PCDTLILWNG HLWDRRVPDE
1601: VSRFDQFTDY GGGGFHPSRN EVIINSEVWD LRKMRLLRSV PSLDQTAITF NSRGDVIYAM LRRNIEDVMS AVHTRRSKHP LFAAFRTLDA INYSDIATIP
1701: VDRCLLDFAT EPTDSFLGLI TMEDQDDMLS SASVSKMDSL PKVLLTSNFV FFF
0101: NDRSNHISGN LCNLIRENDE FFELISSNFL TEDTYSTAAK AASVRLLVNC SLTSMYPYVF DDAVMDKFKN WVLDESVKFP GEHSGSKEAS DAEMLKTYST
0201: GLLAISLTSR GQLVEDVLAS GLSAKLMHYL RVRVIGDSST SRRDALHTTE AKHVSFKGKE EGRGRVRRVV DTVEGDHVLE ADFGREMGQS EGEFEIDGNV
0301: SAVVDCKLKP GDENTGRDDP SRQRMNRSKS RGRGKVNEGA TDTDVLLTSP RSIRLGVRDR DLPKNSDVRN AEDVTLCLGK MKSGIVGIER DENDECFQGC
0401: WVGTKNITDL VKRAIGAAET EARAAHAPDD AAKAAGDAAA ELVKTAALEA CFYFEFKSSG SEEAAVSAAV RAATTVIDAA EVSRNPTCVI SDQTAELNSV
0501: ETDAIAEVGE VSLPDMESLA QLQEKYCIQC LEILGEYVEV LGPVLHEKGV DVCITLLERT SQLGDGFSPL LRDVMKLICA LAAHRKFAAM FVDRGGLQKL
0601: LAVPRVTETF YGLSSCLYTI GSLQGIMERV CALPSDLIHQ LVKLAIELID CSQDQARKNA ALFFAAAFVF RAILDAFDAH NSLQKLLSIL KDAASVRTGA
0701: NSDRSAPEVM TSSEKQMAFH TCFALRQYFR AHLLLLVDSI RPSRSGRGGV RNVPNVRAAY KPLDISNEAV DAVFHQLHKD RKLGPTFVRT QWPAVNNFLA
0801: SSGHVTMLEL CQTPPVDRYL HDLLQHAFGV LHIVTSIPDG RKAIVSATLS NNRAGIAVVL DAANISNSIV DPEIIQPALN VLINLVCPPP SLSNKPPLAQ
0901: NHQPVSGQAT ARPSTDAAAD TQSTGNAPPT PVAPASSGLV GDRRIFLGAG TGSAGLAAKL EQVYRLAREA VRGNDGIKIL LKLLQPRIYV NAPAAPDCLR
1001: ALACRVLLGL ARDETIAQIL TKLEVGKSLS ELIRDAGSQS SGTDQVRWQA ELAQVALELI GILTNSGHAN TLTASEAATP TLRRIERAAI AAATPITYDS
1101: KELLLLIHEH LQASGLGETA SALLKETQLS PLPSLAPPSS IAFSATQEMP APVQQWPSGR ASGGFFPSKL KVNTHEEDPS LIGNAAPSAK KKQLTFSPSF
1201: SLQSRNQTFP QDAHPQSTQR IDSSSSNSDP ACADTSKTAA ELVLKSDIDA DSQFKTPTFP RKRKLSELKD PDVSVSGKRI NLGELGPPSP ACRTTASFRR
1301: SSTIADASGL QTPASALDVN QSGSSRLGLM TPASQLRLPS DPQPSNTERL TLDSLVVQYL KHQHRQCLAP ITTLPPVSLL HPHVCPEPKR LLEAPLNVTG
1401: RLGTRELQSF YSGVHGSRRD RQFVFSRFKS WRSCRDENAL FTCISLLGGT NHLAVGSHAG EIKIFDASSC SLLESFSGHQ APVTLVQPYV SGDTQLLLSS
1501: SSSDVQLWDA SYITNGSKHS FDGCKAAKFS NSGRYFAALS CEGSTKDVLL YNVESCTLSH KYTDTSTSSR SSPYSLVHFS PCDTLILWNG HLWDRRVPDE
1601: VSRFDQFTDY GGGGFHPSRN EVIINSEVWD LRKMRLLRSV PSLDQTAITF NSRGDVIYAM LRRNIEDVMS AVHTRRSKHP LFAAFRTLDA INYSDIATIP
1701: VDRCLLDFAT EPTDSFLGLI TMEDQDDMLS SASVSKMDSL PKVLLTSNFV FFF
0001: MDGQEHAEVP NSMVEDDQSV VAAEAIAELA NSTGEPNPEE GEEQSVEDEL IAKAQKLMED ITSVANNPNP NILHALSQLL ESQESLFLEE NGHFSNARGS
0101: HNSGKLCILI RENDEFFELI SSTFLSENSY STAVKAASAR LLMNCSLTWM YPHVFDDAVT ENFKNWVMEE AVKFPGEDSA KKEASDFEML KTYSTGLLAL
0201: SLASRGQIVE DVLTSGLSAK LMHYLRVRVL KEPSTSRIHT TETKHVSLKT KEEGRSRVRK IVDTVEGDHV LETDSGREMG QTDVQPDGEF EIDGRDVFNV
0301: SGVVDCKIKP GDDNSVRDDP SRHRLNRSKS RGRGRVHEGA PDTEVLLASP RLGRLLVRDR DLSKISDGRN AEDVTVCLGK MKSGIMEIER EDNDECFQGC
0401: IIGTKNITDL VKRAVGAAET EARAAHAPDD AAKAAGDAAA ELVKTAALEE FKSSGSEEAA VSAATRAAIT VIDAAEVSRN PTCVTSDQTT DVSEVSLPDI
0501: ESLAQLQEKY CIQCLEILGE YVEVLGPVLH EKGVDVCIVL LERTSQLDDR STVSPLLPDV MKLICALAAH RKFAAMFVER RGILKLLAVP RVSETFYGLS
0601: SCLYTIGSLQ GIMERVCALP LVVIHQVVKL AIELLDCSQD QARKNSALFF AAAFVFRAIL DAFDAQDSLQ KLLAILKDAA SVRTGANTDR SAPEVMTSSE
0701: KQMAFHTCFA LRQYFRAHLL LLVDSIRPSR ISRGGVPSSM KPNIRAAYKP LDISNEAVDA IFLQLQKDRR LGPTFVKAQW PAVNNFLASS GHVTMLELCQ
0801: TPPVDRYLHD LLQYAFGVLH IVTSIPDGRK AIAHATLSNN RAGIAVILDA ANISNSIVDP EIIQPALNVL INLVCPPPSL SNKPPLAQNH QPVPGQATTR
0901: PSTDVAVGTQ STGNAPQTPV APASSGLVGD RRIFLGAGTG SAGLAAKLEQ VYRQAREAVR GNDGIKILLK LLQPRIYVNP PATPDCLRAL ACRVLLGLAR
1001: DDTIAQILTK LEVGKSLSEL IRDSGGQSSG TDQGRWQAEL AQVALELIGI VTNSGHATTL TASDAATPTL RRIERAAIAA ATPITYDSKE LLLLIHEHLQ
1101: ASGLGDTASA LLKEAQLTPL PSSASPSSIA YSTTQEMSTP LAQEQWPSGR ANSGFFTSKP KVCAHDEDPN SRSNAALSAK KKHLASSTLE MPTPVAQQQW
1201: PSGRANCGFC PSIPKINARD EDPSSRGNAA PSAKKKQLTF SPSFSSQSRK QSFSHDALPQ STQRINCCSN SDPALADTSE TAAELVLKND LDADAQFKTP
1301: ISFPRKRKLS ELRDSSVPGK RIDLGERRNS TFADGSGLQT PASALDANQS GSSRLGQMTP ASQLRLPSDP QPSNPERLSL DSLVVQYLKH QHRQCLAPIT
1401: TLPPVSLLHP HVCPEPKRLL EAPLNMTGRL GTRELQSFYS GVHGNRRDRQ FVFSRFKSWR SFRDETALFT CIALLGGTNH IAVGSHAGEI KIFEASSGSM
1501: LESVSGHQAP VTLVQPYVSR DTQLLLSSSS SDVQLWDASS ITGGPRHSFD GCKAAKFSNS GLQFAALSCE ASRKDVLLYD VQTCSPCQKL TDTVTSSRSN
1601: PYSLVHFSPC DTLILWNGVL WDRRIPEKVR RFDQFTDYGG GGFHPSRNEV IINSEIWDMR TFKLLRSVPS LDQTAITFNS RGDVIYAMLR RNIEDVMSAV
1701: HTRRVKHPLF AAFRTLDAIN YSDIATIPVD RCLLDFATEP TDSFLGLITM EDQEDMFSSA RMYEIGRRRP TDDDSDPDDD DETEDEDEDD EEEDDLDRIL
1801: GLAGDNSDSG DDDLSSEDNE DSVSDFDEEA DILIDGDFME ELIEGENEDD GNGEDEDDDD DGEMQDFMSS GEEDDYRDNI RSS
0101: HNSGKLCILI RENDEFFELI SSTFLSENSY STAVKAASAR LLMNCSLTWM YPHVFDDAVT ENFKNWVMEE AVKFPGEDSA KKEASDFEML KTYSTGLLAL
0201: SLASRGQIVE DVLTSGLSAK LMHYLRVRVL KEPSTSRIHT TETKHVSLKT KEEGRSRVRK IVDTVEGDHV LETDSGREMG QTDVQPDGEF EIDGRDVFNV
0301: SGVVDCKIKP GDDNSVRDDP SRHRLNRSKS RGRGRVHEGA PDTEVLLASP RLGRLLVRDR DLSKISDGRN AEDVTVCLGK MKSGIMEIER EDNDECFQGC
0401: IIGTKNITDL VKRAVGAAET EARAAHAPDD AAKAAGDAAA ELVKTAALEE FKSSGSEEAA VSAATRAAIT VIDAAEVSRN PTCVTSDQTT DVSEVSLPDI
0501: ESLAQLQEKY CIQCLEILGE YVEVLGPVLH EKGVDVCIVL LERTSQLDDR STVSPLLPDV MKLICALAAH RKFAAMFVER RGILKLLAVP RVSETFYGLS
0601: SCLYTIGSLQ GIMERVCALP LVVIHQVVKL AIELLDCSQD QARKNSALFF AAAFVFRAIL DAFDAQDSLQ KLLAILKDAA SVRTGANTDR SAPEVMTSSE
0701: KQMAFHTCFA LRQYFRAHLL LLVDSIRPSR ISRGGVPSSM KPNIRAAYKP LDISNEAVDA IFLQLQKDRR LGPTFVKAQW PAVNNFLASS GHVTMLELCQ
0801: TPPVDRYLHD LLQYAFGVLH IVTSIPDGRK AIAHATLSNN RAGIAVILDA ANISNSIVDP EIIQPALNVL INLVCPPPSL SNKPPLAQNH QPVPGQATTR
0901: PSTDVAVGTQ STGNAPQTPV APASSGLVGD RRIFLGAGTG SAGLAAKLEQ VYRQAREAVR GNDGIKILLK LLQPRIYVNP PATPDCLRAL ACRVLLGLAR
1001: DDTIAQILTK LEVGKSLSEL IRDSGGQSSG TDQGRWQAEL AQVALELIGI VTNSGHATTL TASDAATPTL RRIERAAIAA ATPITYDSKE LLLLIHEHLQ
1101: ASGLGDTASA LLKEAQLTPL PSSASPSSIA YSTTQEMSTP LAQEQWPSGR ANSGFFTSKP KVCAHDEDPN SRSNAALSAK KKHLASSTLE MPTPVAQQQW
1201: PSGRANCGFC PSIPKINARD EDPSSRGNAA PSAKKKQLTF SPSFSSQSRK QSFSHDALPQ STQRINCCSN SDPALADTSE TAAELVLKND LDADAQFKTP
1301: ISFPRKRKLS ELRDSSVPGK RIDLGERRNS TFADGSGLQT PASALDANQS GSSRLGQMTP ASQLRLPSDP QPSNPERLSL DSLVVQYLKH QHRQCLAPIT
1401: TLPPVSLLHP HVCPEPKRLL EAPLNMTGRL GTRELQSFYS GVHGNRRDRQ FVFSRFKSWR SFRDETALFT CIALLGGTNH IAVGSHAGEI KIFEASSGSM
1501: LESVSGHQAP VTLVQPYVSR DTQLLLSSSS SDVQLWDASS ITGGPRHSFD GCKAAKFSNS GLQFAALSCE ASRKDVLLYD VQTCSPCQKL TDTVTSSRSN
1601: PYSLVHFSPC DTLILWNGVL WDRRIPEKVR RFDQFTDYGG GGFHPSRNEV IINSEIWDMR TFKLLRSVPS LDQTAITFNS RGDVIYAMLR RNIEDVMSAV
1701: HTRRVKHPLF AAFRTLDAIN YSDIATIPVD RCLLDFATEP TDSFLGLITM EDQEDMFSSA RMYEIGRRRP TDDDSDPDDD DETEDEDEDD EEEDDLDRIL
1801: GLAGDNSDSG DDDLSSEDNE DSVSDFDEEA DILIDGDFME ELIEGENEDD GNGEDEDDDD DGEMQDFMSS GEEDDYRDNI RSS
Arabidopsis Description
DCAF1DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M086]
SUBAcon: [cytosol,nucleus,plasma membrane]
SUBAcon: [cytosol,nucleus,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.