Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d009745_P023 | |
| Zm00001d013116_P002 | |
| Zm00001d034361_P001 | |
| Zm00001d039165_P046 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d026691_P004 | Maize | cytosol | 88.85 | 88.25 |
| Os04t0691200-00 | Rice | cytosol | 25.76 | 77.41 |
| TraesCS2B01G630100.1 | Wheat | nucleus | 58.62 | 73.36 |
| HORVU2Hr1G126010.3 | Barley | cytosol | 68.56 | 70.52 |
| TraesCS2A01G566600.1 | Wheat | nucleus | 68.82 | 68.82 |
| TraesCS2D01G576800.1 | Wheat | cytosol | 68.72 | 68.72 |
| GSMUA_Achr3P22370_001 | Banana | cytosol | 49.74 | 56.92 |
| GSMUA_Achr7P23160_001 | Banana | plasma membrane, plastid, vacuole | 48.69 | 54.09 |
| VIT_04s0008g03060.t01 | Wine grape | cytosol, nucleus, plasma membrane | 52.94 | 51.19 |
| KRH52554 | Soybean | nucleus | 51.1 | 50.55 |
| Solyc08g074370.2.1 | Tomato | nucleus | 49.74 | 50.29 |
| KRH61892 | Soybean | cytosol | 51.0 | 49.97 |
| CDY13413 | Canola | nucleus | 43.38 | 47.2 |
| CDY36454 | Canola | nucleus | 45.48 | 47.04 |
| CDX72295 | Canola | cytosol, nucleus, plastid | 43.32 | 47.01 |
| CDY23283 | Canola | nucleus | 45.11 | 46.48 |
| Bra024021.1-P | Field mustard | nucleus | 43.22 | 45.67 |
| AT4G31160.1 | Thale cress | cytosol, nucleus, plasma membrane | 44.74 | 45.19 |
| Bra010248.1-P | Field mustard | nucleus | 45.11 | 45.04 |
| KRH16085 | Soybean | cytosol | 16.35 | 43.44 |
| VIT_15s0021g02350.t01 | Wine grape | nucleus | 5.84 | 32.27 |
| CDY03208 | Canola | nucleus | 3.0 | 29.38 |
Protein Annotations
| EntrezGene:103646181 | Gene3D:2.130.10.10 | MapMan:35.1 | UniProt:A0A1D6E587 | InterPro:ARM-type_fold | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016567 | GO:GO:0019538 | InterPro:IPR001680 | InterPro:IPR006594 | InterPro:IPR015943 | InterPro:LisH |
| ProteinID:ONM15654.1 | ProteinID:ONM15658.1 | PFscan:PS50896 | PANTHER:PTHR13129 | SMART:SM00320 | SMART:SM00667 |
| SUPFAM:SSF48371 | SUPFAM:SSF50978 | UniParc:UPI0004DE830F | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom_sf |
| EnsemblPlantsGene:Zm00001d002933 | EnsemblPlants:Zm00001d002933_P014 | EnsemblPlants:Zm00001d002933_T014 | SEG:seg | : | : |
Description
DDB1- and CUL4-associated factor homolog 1
Coordinates
chr2:+:27104066..27117008
Molecular Weight (calculated)
207695.0 Da
IEP (calculated)
5.304
GRAVY (calculated)
-0.299
Length
1902 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAESEDATAA EPGSGPPHED EDALLARAHT VISRIIDREL DPNPRLLHTL ATMCELHEAR YLELRSADTM FNSTNTRTAF TIGKLANLLR DNDEFYELVF
0101: CKFLSDTSYS VAVRAATARL LLSCHPAWTP PYPHVFEDSI IDNIKKWVTE DPEASNECKW KYLGNNKPTD AEMLRTYGIG LLAMALCSSG QLIEDVLTLG
0201: VSAKLMRYLR IRVLGDASSS QRDANHPQDT KHPWGGDDSR GKSRLSQDGS RLDGTRVGYG MLTNPTAEKN NEPCVGMMQA YGARSLDDSF ASLDDSDVPE
0301: ADWTNDRSYS TRVCDTKSKH GERNSVTRLL KDEEVSENGE LLKRKLNRAP SRLRVKGKAG DSLPECEMTP LSPTSGLRIG GQATRDRNVA RVDDPKEATD
0401: VNNRLFNTIS KEEYEDRFRD CIIGLKDISD IVLKAVRAAE AEARSANAPD EAVKAAGDAA AELVKFAALE VWKSENNSDA VVVVAEKAAS AVVEAALSIS
0501: VSRSANQVGE ERAMEEAVQT SEDQDLENFV ISDKAQLLQL RENYSIQCLQ ILGEYVEALG PVLHEKGVDV CLTLLQRSMK NQEGCDHFAQ LLDVLKLVCA
0601: LAAHRKFAAL FVDRGGIQKI VSMPRVTQTY MGLSACLFTF GSLQSTIERV CALSSDTLDS VVELALLLLE CPQDLARKNV AIFFAAAFVF KAVLDLFDAR
0701: NGMQKLLDIL CGCASGRSGS NSGGAGSSNV NQGNDRSPAE VLTASEKQVA YHTCVALRQY FRAHLLQLVD SIRPSKSIRS IARNTSSARA GCKPFDISNE
0801: AMDAIFCQIQ RDRKLGLALV RACWLALDKF VASNGHMTML ELCKFQAHGD RYLRDLTQYA IGVLHIITLM PQPHVRKSIV QGTLSNNRAG MAVLLDTVKS
0901: LDYIDHEVIC PALNVLVNLV CPPPSISNKP LSSSNQQPAA AQALASESRE KNFEKTISDR NLLTNLGESR ERSGDGNPAE KNNTLHQGTP STPVVPSGVV
1001: GDRRIMLGVG GGGPGLAAQL EQGYRQAREV VRANNGIKIL LQLLGSRMVT HPVAIDSIRA LACRVLLGLA RDDTIAHILT KLQVGKKLSE LIRDISAQTS
1101: GGDSGRWQTE LTQVAIELIG VLTNSGKETT LAATDAAAPA LRRIERAGIA AAAPISYHSR ELMQLIHEHL LGSGFAATAA MLQKEAGLAP LPLTAAVLPA
1201: HQVAALEASS VQQQWPSGHV QGFLSDKINT STYQSAQRSD PKLPSSKKKA LAFSSSFSRR ARSPHPSNIL KSPVPIAADT GDAEMLNKAP LSLPLKRNFV
1301: DVKDISFASA SKRLAITDQI YQSSAFQTPA PTRKGLSVSV DSPTSSHCGW TNFNNAFTEN LDNSQGTPGA LTTTALPGVN DQQSGNLERM TLDSLVVQYL
1401: KHQHRQCPAP VTTLPPLSLL HPHVCPEPSR SLSAPANIAA RVGSREISRQ FSGIQIPRRD RHFIYSRFKQ CRVCRDEASL LTCLTFLGDA ARVVAGNHTG
1501: ELRIFDCNTA NLLETQTCHQ HLVTMMESTY TGGIEMILTS SLNEVKIWDA FSVSAGPLHT FDDCKSARFN HYGTSFAALS TDTAQREVQL YDVQTYTLAT
1601: RLPDNTSSSG SGRGYVQPII HFSPSDTMLL WNGVLWDTRQ PNPVHQFDQF TDYCGGGFHP AGNEVILNSE VWDLRKFKLL RSVPSLDQTV IKFNGTGDVI
1701: YATLRRNLDD VTSCINARRV RHPLFPAFST IDAVTYSDIA TVQMDRCVLD LATESNDSLI GVVAMDDHQE LFSSARLFEV GRKRITDDDS DPEDAGETDD
1801: DSDDDDDDSD DGVLAPVLEG GTDSEDISSS SSDDGDEDGG DDDIPSSDGI EDDRFIDERR REFMMDLFGD GWDDDEAYMM GSFSSGDEEG WIICSWRGRG
1901: RS
0101: CKFLSDTSYS VAVRAATARL LLSCHPAWTP PYPHVFEDSI IDNIKKWVTE DPEASNECKW KYLGNNKPTD AEMLRTYGIG LLAMALCSSG QLIEDVLTLG
0201: VSAKLMRYLR IRVLGDASSS QRDANHPQDT KHPWGGDDSR GKSRLSQDGS RLDGTRVGYG MLTNPTAEKN NEPCVGMMQA YGARSLDDSF ASLDDSDVPE
0301: ADWTNDRSYS TRVCDTKSKH GERNSVTRLL KDEEVSENGE LLKRKLNRAP SRLRVKGKAG DSLPECEMTP LSPTSGLRIG GQATRDRNVA RVDDPKEATD
0401: VNNRLFNTIS KEEYEDRFRD CIIGLKDISD IVLKAVRAAE AEARSANAPD EAVKAAGDAA AELVKFAALE VWKSENNSDA VVVVAEKAAS AVVEAALSIS
0501: VSRSANQVGE ERAMEEAVQT SEDQDLENFV ISDKAQLLQL RENYSIQCLQ ILGEYVEALG PVLHEKGVDV CLTLLQRSMK NQEGCDHFAQ LLDVLKLVCA
0601: LAAHRKFAAL FVDRGGIQKI VSMPRVTQTY MGLSACLFTF GSLQSTIERV CALSSDTLDS VVELALLLLE CPQDLARKNV AIFFAAAFVF KAVLDLFDAR
0701: NGMQKLLDIL CGCASGRSGS NSGGAGSSNV NQGNDRSPAE VLTASEKQVA YHTCVALRQY FRAHLLQLVD SIRPSKSIRS IARNTSSARA GCKPFDISNE
0801: AMDAIFCQIQ RDRKLGLALV RACWLALDKF VASNGHMTML ELCKFQAHGD RYLRDLTQYA IGVLHIITLM PQPHVRKSIV QGTLSNNRAG MAVLLDTVKS
0901: LDYIDHEVIC PALNVLVNLV CPPPSISNKP LSSSNQQPAA AQALASESRE KNFEKTISDR NLLTNLGESR ERSGDGNPAE KNNTLHQGTP STPVVPSGVV
1001: GDRRIMLGVG GGGPGLAAQL EQGYRQAREV VRANNGIKIL LQLLGSRMVT HPVAIDSIRA LACRVLLGLA RDDTIAHILT KLQVGKKLSE LIRDISAQTS
1101: GGDSGRWQTE LTQVAIELIG VLTNSGKETT LAATDAAAPA LRRIERAGIA AAAPISYHSR ELMQLIHEHL LGSGFAATAA MLQKEAGLAP LPLTAAVLPA
1201: HQVAALEASS VQQQWPSGHV QGFLSDKINT STYQSAQRSD PKLPSSKKKA LAFSSSFSRR ARSPHPSNIL KSPVPIAADT GDAEMLNKAP LSLPLKRNFV
1301: DVKDISFASA SKRLAITDQI YQSSAFQTPA PTRKGLSVSV DSPTSSHCGW TNFNNAFTEN LDNSQGTPGA LTTTALPGVN DQQSGNLERM TLDSLVVQYL
1401: KHQHRQCPAP VTTLPPLSLL HPHVCPEPSR SLSAPANIAA RVGSREISRQ FSGIQIPRRD RHFIYSRFKQ CRVCRDEASL LTCLTFLGDA ARVVAGNHTG
1501: ELRIFDCNTA NLLETQTCHQ HLVTMMESTY TGGIEMILTS SLNEVKIWDA FSVSAGPLHT FDDCKSARFN HYGTSFAALS TDTAQREVQL YDVQTYTLAT
1601: RLPDNTSSSG SGRGYVQPII HFSPSDTMLL WNGVLWDTRQ PNPVHQFDQF TDYCGGGFHP AGNEVILNSE VWDLRKFKLL RSVPSLDQTV IKFNGTGDVI
1701: YATLRRNLDD VTSCINARRV RHPLFPAFST IDAVTYSDIA TVQMDRCVLD LATESNDSLI GVVAMDDHQE LFSSARLFEV GRKRITDDDS DPEDAGETDD
1801: DSDDDDDDSD DGVLAPVLEG GTDSEDISSS SSDDGDEDGG DDDIPSSDGI EDDRFIDERR REFMMDLFGD GWDDDEAYMM GSFSSGDEEG WIICSWRGRG
1901: RS
0001: MDGQEHAEVP NSMVEDDQSV VAAEAIAELA NSTGEPNPEE GEEQSVEDEL IAKAQKLMED ITSVANNPNP NILHALSQLL ESQESLFLEE NGHFSNARGS
0101: HNSGKLCILI RENDEFFELI SSTFLSENSY STAVKAASAR LLMNCSLTWM YPHVFDDAVT ENFKNWVMEE AVKFPGEDSA KKEASDFEML KTYSTGLLAL
0201: SLASRGQIVE DVLTSGLSAK LMHYLRVRVL KEPSTSRIHT TETKHVSLKT KEEGRSRVRK IVDTVEGDHV LETDSGREMG QTDVQPDGEF EIDGRDVFNV
0301: SGVVDCKIKP GDDNSVRDDP SRHRLNRSKS RGRGRVHEGA PDTEVLLASP RLGRLLVRDR DLSKISDGRN AEDVTVCLGK MKSGIMEIER EDNDECFQGC
0401: IIGTKNITDL VKRAVGAAET EARAAHAPDD AAKAAGDAAA ELVKTAALEE FKSSGSEEAA VSAATRAAIT VIDAAEVSRN PTCVTSDQTT DVSEVSLPDI
0501: ESLAQLQEKY CIQCLEILGE YVEVLGPVLH EKGVDVCIVL LERTSQLDDR STVSPLLPDV MKLICALAAH RKFAAMFVER RGILKLLAVP RVSETFYGLS
0601: SCLYTIGSLQ GIMERVCALP LVVIHQVVKL AIELLDCSQD QARKNSALFF AAAFVFRAIL DAFDAQDSLQ KLLAILKDAA SVRTGANTDR SAPEVMTSSE
0701: KQMAFHTCFA LRQYFRAHLL LLVDSIRPSR ISRGGVPSSM KPNIRAAYKP LDISNEAVDA IFLQLQKDRR LGPTFVKAQW PAVNNFLASS GHVTMLELCQ
0801: TPPVDRYLHD LLQYAFGVLH IVTSIPDGRK AIAHATLSNN RAGIAVILDA ANISNSIVDP EIIQPALNVL INLVCPPPSL SNKPPLAQNH QPVPGQATTR
0901: PSTDVAVGTQ STGNAPQTPV APASSGLVGD RRIFLGAGTG SAGLAAKLEQ VYRQAREAVR GNDGIKILLK LLQPRIYVNP PATPDCLRAL ACRVLLGLAR
1001: DDTIAQILTK LEVGKSLSEL IRDSGGQSSG TDQGRWQAEL AQVALELIGI VTNSGHATTL TASDAATPTL RRIERAAIAA ATPITYDSKE LLLLIHEHLQ
1101: ASGLGDTASA LLKEAQLTPL PSSASPSSIA YSTTQEMSTP LAQEQWPSGR ANSGFFTSKP KVCAHDEDPN SRSNAALSAK KKHLASSTLE MPTPVAQQQW
1201: PSGRANCGFC PSIPKINARD EDPSSRGNAA PSAKKKQLTF SPSFSSQSRK QSFSHDALPQ STQRINCCSN SDPALADTSE TAAELVLKND LDADAQFKTP
1301: ISFPRKRKLS ELRDSSVPGK RIDLGERRNS TFADGSGLQT PASALDANQS GSSRLGQMTP ASQLRLPSDP QPSNPERLSL DSLVVQYLKH QHRQCLAPIT
1401: TLPPVSLLHP HVCPEPKRLL EAPLNMTGRL GTRELQSFYS GVHGNRRDRQ FVFSRFKSWR SFRDETALFT CIALLGGTNH IAVGSHAGEI KIFEASSGSM
1501: LESVSGHQAP VTLVQPYVSR DTQLLLSSSS SDVQLWDASS ITGGPRHSFD GCKAAKFSNS GLQFAALSCE ASRKDVLLYD VQTCSPCQKL TDTVTSSRSN
1601: PYSLVHFSPC DTLILWNGVL WDRRIPEKVR RFDQFTDYGG GGFHPSRNEV IINSEIWDMR TFKLLRSVPS LDQTAITFNS RGDVIYAMLR RNIEDVMSAV
1701: HTRRVKHPLF AAFRTLDAIN YSDIATIPVD RCLLDFATEP TDSFLGLITM EDQEDMFSSA RMYEIGRRRP TDDDSDPDDD DETEDEDEDD EEEDDLDRIL
1801: GLAGDNSDSG DDDLSSEDNE DSVSDFDEEA DILIDGDFME ELIEGENEDD GNGEDEDDDD DGEMQDFMSS GEEDDYRDNI RSS
0101: HNSGKLCILI RENDEFFELI SSTFLSENSY STAVKAASAR LLMNCSLTWM YPHVFDDAVT ENFKNWVMEE AVKFPGEDSA KKEASDFEML KTYSTGLLAL
0201: SLASRGQIVE DVLTSGLSAK LMHYLRVRVL KEPSTSRIHT TETKHVSLKT KEEGRSRVRK IVDTVEGDHV LETDSGREMG QTDVQPDGEF EIDGRDVFNV
0301: SGVVDCKIKP GDDNSVRDDP SRHRLNRSKS RGRGRVHEGA PDTEVLLASP RLGRLLVRDR DLSKISDGRN AEDVTVCLGK MKSGIMEIER EDNDECFQGC
0401: IIGTKNITDL VKRAVGAAET EARAAHAPDD AAKAAGDAAA ELVKTAALEE FKSSGSEEAA VSAATRAAIT VIDAAEVSRN PTCVTSDQTT DVSEVSLPDI
0501: ESLAQLQEKY CIQCLEILGE YVEVLGPVLH EKGVDVCIVL LERTSQLDDR STVSPLLPDV MKLICALAAH RKFAAMFVER RGILKLLAVP RVSETFYGLS
0601: SCLYTIGSLQ GIMERVCALP LVVIHQVVKL AIELLDCSQD QARKNSALFF AAAFVFRAIL DAFDAQDSLQ KLLAILKDAA SVRTGANTDR SAPEVMTSSE
0701: KQMAFHTCFA LRQYFRAHLL LLVDSIRPSR ISRGGVPSSM KPNIRAAYKP LDISNEAVDA IFLQLQKDRR LGPTFVKAQW PAVNNFLASS GHVTMLELCQ
0801: TPPVDRYLHD LLQYAFGVLH IVTSIPDGRK AIAHATLSNN RAGIAVILDA ANISNSIVDP EIIQPALNVL INLVCPPPSL SNKPPLAQNH QPVPGQATTR
0901: PSTDVAVGTQ STGNAPQTPV APASSGLVGD RRIFLGAGTG SAGLAAKLEQ VYRQAREAVR GNDGIKILLK LLQPRIYVNP PATPDCLRAL ACRVLLGLAR
1001: DDTIAQILTK LEVGKSLSEL IRDSGGQSSG TDQGRWQAEL AQVALELIGI VTNSGHATTL TASDAATPTL RRIERAAIAA ATPITYDSKE LLLLIHEHLQ
1101: ASGLGDTASA LLKEAQLTPL PSSASPSSIA YSTTQEMSTP LAQEQWPSGR ANSGFFTSKP KVCAHDEDPN SRSNAALSAK KKHLASSTLE MPTPVAQQQW
1201: PSGRANCGFC PSIPKINARD EDPSSRGNAA PSAKKKQLTF SPSFSSQSRK QSFSHDALPQ STQRINCCSN SDPALADTSE TAAELVLKND LDADAQFKTP
1301: ISFPRKRKLS ELRDSSVPGK RIDLGERRNS TFADGSGLQT PASALDANQS GSSRLGQMTP ASQLRLPSDP QPSNPERLSL DSLVVQYLKH QHRQCLAPIT
1401: TLPPVSLLHP HVCPEPKRLL EAPLNMTGRL GTRELQSFYS GVHGNRRDRQ FVFSRFKSWR SFRDETALFT CIALLGGTNH IAVGSHAGEI KIFEASSGSM
1501: LESVSGHQAP VTLVQPYVSR DTQLLLSSSS SDVQLWDASS ITGGPRHSFD GCKAAKFSNS GLQFAALSCE ASRKDVLLYD VQTCSPCQKL TDTVTSSRSN
1601: PYSLVHFSPC DTLILWNGVL WDRRIPEKVR RFDQFTDYGG GGFHPSRNEV IINSEIWDMR TFKLLRSVPS LDQTAITFNS RGDVIYAMLR RNIEDVMSAV
1701: HTRRVKHPLF AAFRTLDAIN YSDIATIPVD RCLLDFATEP TDSFLGLITM EDQEDMFSSA RMYEIGRRRP TDDDSDPDDD DETEDEDEDD EEEDDLDRIL
1801: GLAGDNSDSG DDDLSSEDNE DSVSDFDEEA DILIDGDFME ELIEGENEDD GNGEDEDDDD DGEMQDFMSS GEEDDYRDNI RSS
Arabidopsis Description
DCAF1DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M086]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.