Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36454 | Canola | nucleus | 96.37 | 96.74 |
| Bra010248.1-P | Field mustard | nucleus | 98.7 | 95.64 |
| CDY13413 | Canola | nucleus | 78.87 | 83.3 |
| CDX72295 | Canola | cytosol, nucleus, plastid | 78.33 | 82.49 |
| AT4G31160.1 | Thale cress | cytosol, nucleus, plasma membrane | 79.47 | 77.91 |
| KRH52554 | Soybean | nucleus | 60.08 | 57.67 |
| KRH61892 | Soybean | cytosol | 59.43 | 56.52 |
| VIT_04s0008g03060.t01 | Wine grape | cytosol, nucleus, plasma membrane | 59.48 | 55.82 |
| Solyc08g074370.2.1 | Tomato | nucleus | 55.47 | 54.44 |
| GSMUA_Achr3P22370_001 | Banana | cytosol | 46.37 | 51.5 |
| GSMUA_Achr7P23160_001 | Banana | plasma membrane, plastid, vacuole | 47.56 | 51.28 |
| KRH16085 | Soybean | cytosol | 19.28 | 49.72 |
| TraesCS2B01G630100.1 | Wheat | nucleus | 40.57 | 49.28 |
| CDY03208 | Canola | nucleus | 5.15 | 48.97 |
| Os04t0691200-00 | Rice | cytosol | 15.87 | 46.29 |
| HORVU2Hr1G126010.3 | Barley | cytosol | 46.21 | 46.13 |
| TraesCS2A01G566600.1 | Wheat | nucleus | 47.02 | 45.64 |
| EES13157 | Sorghum | cytosol | 47.35 | 45.62 |
| TraesCS2D01G576800.1 | Wheat | cytosol | 46.8 | 45.43 |
| Zm00001d026691_P004 | Maize | cytosol | 46.86 | 45.17 |
| Zm00001d002933_P014 | Maize | cytosol | 46.48 | 45.11 |
| VIT_15s0021g02350.t01 | Wine grape | nucleus | 6.61 | 35.47 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:35.1 | UniProt:A0A078GF81 | EnsemblPlants:CDY23283 | ProteinID:CDY23283 | ProteinID:CDY23283.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016567 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00021853001 | InterPro:IPR001680 | InterPro:IPR006594 |
| InterPro:IPR015943 | InterPro:IPR017986 | InterPro:LisH | PFAM:PF08513 | PFscan:PS50294 | PFscan:PS50896 |
| PANTHER:PTHR13129 | SMART:SM00320 | SMART:SM00667 | SUPFAM:SSF50978 | UniPathway:UPA00143 | UniParc:UPI0004EF42C6 |
| InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : |
Description
BnaA08g12630DBnaA08g12630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GF81]
Coordinates
chrLK032142:+:266666..273429
Molecular Weight (calculated)
200426.0 Da
IEP (calculated)
4.701
GRAVY (calculated)
-0.383
Length
1846 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDGQGNEPEV PNPTAENEQL ALAAETETET ENSNGGGDNP KEEEGLIEKA QKLMEHITNG ANNPNPTVLH ALSHLLESQE SLFIKENGFY SNGRGSHISG
0101: KLCKLIKEND EFFELISSTF LSENTYSTAV KAASARLLMN WLLTWTHPYI FDDAVTENFK KWVLEEAVKF PGEHSGSSEA SDSEMLKTYS TGLLAHSLTS
0201: RGQLVEDVLT SGLSAKLMHY LRVRVIGEAS TSRRDALHTT EAKHVSLKTK EDGRSRVRRV VDTAEGDHVL EADAGRETDV LSEGELEIDG RDRCNVPAVF
0301: DGKMKPGDGN TGRDDPSRNR LSRSKSRARG KVNEGATDTD SLLASPTSGR LGVRDRDQSK NLDVRNAEDG TKWLGKMKSG IMEIEREKND ECFQDCVIGT
0401: KNITDIVKRA VGAAETEARA AHAPDEAVKA AGDAAAELVK TTALEACFKF DFLNEPLGQE FKSSGSEEAA VAAARRAATT VIDAAEVSRN ATCVTSDQTA
0501: GTSSVETDAT VDVGEVSLPD IESLAQLQEK YCIQCLEILG EYVEVLGPVL HEKGVDVCIT LLERTSQLGD SFTLSPLLPD VMKLICALAA HRKFAAMFVD
0601: RGGLQKLLAV PRVTETFYGL SSCLYTIGSL QGIMERVCAL PSDLIHQVVK LAIELLDCSQ DQARKNSALF FAAAFVFRAI LDAFDAHNSL QKLLAILKDA
0701: ASVRTGANSD RSAPEVMTSS EKQMAFHTCF ALRQYFRAHL LLLVESIRPS RSGRGGVPKV PNIRAAHKPL DISNEAVDAV FLQLQKDRKL GPTFVRTQWP
0801: AVNNFLTSSG HVTMLELCQT PPVDRYLHDL LQYAFGVLHI VTSIPDGRKA IVTAALSNNR AGIAVILDAT NISNSIVDPE IIQPALNVLI NLVCPPPSLS
0901: NKPLLAQNHQ PVPDQATARP STDVPADNAP PTPVAPASSG LVGDRRIFLG AGTGSAGLAA KLEQVYRQAR EAVRGNDGIK ILLKLLQPRI YVNPPATPDC
1001: LRALACRVLL GLARDDTIAQ ILTKLEVGRS LSELIRDSGG QSSGTDQVRW QAELTQVALE LIGIVTNSGH ANTLTASDAA TPTLRRIERA AIAAATPITY
1101: DSKELLLLIH EHLQASGLGE TASALLKEAQ LNPLPSLAPP SSIAYSATQE MSAPVAQVQW PSGRASGGFF NSKPEVCAHD EDPNSKCNAA LSAKKKHLAS
1201: STQETSTPDA QPQSTQRINS SSNSDPACGD TSEAVAEKND LDADAQFKTP TFPRKRKLSE LRETEMSTSS KRINLGELGP RTPACPTSAS LRRNSTIAEA
1301: SGFQTPASAL DVNQSGSSRL GQMTPASQLR LPSDPQPSER LSLDSLVVQY LKHQHRQCRA PITTLPPVSL LHPHVCPEPK RLLEAPLNIT DRLGTRELQS
1401: YYSGVHGNRR DRQFVFSRFK SWRSYRDETA LFTSISLLGG TNHLAVGSHA GEIKIFDASS GNMLESVSGH QAPVTLVQSY VSGDTQLLLS SSYSDVQLWD
1501: ASDITVGSKH SFDGCKAAKF SNSGSLIAAL SSEGPTKDVL LYNVETGSLS EKFTDPDTSS RTSPYTLVHF NPCDSLILWN GHLWDRRVPN SCKRFDQFTD
1601: YGGGGFHPSR NEVIINSEVW DLRNMNTRLI RSVPSLDQTA ITFNSRGDVI YAMLRRNIED VMSAVNTRRA KHPLFAAFRT LDAVNYSDIA TIPVDRCLLD
1701: FATEPTDSFL GLITMEDQDD MFSSARMYEI GRRRPTDDDS DPDDDGETED EDEDDEDDED DLDRILGLAG DDSDSGDDDM SSDDNEDNSA SDFDDDDGGM
1801: FFDGGIMEIV SEGDDEDDNG DSDGEDSDDD GDSISSGEED FLNRIH
0101: KLCKLIKEND EFFELISSTF LSENTYSTAV KAASARLLMN WLLTWTHPYI FDDAVTENFK KWVLEEAVKF PGEHSGSSEA SDSEMLKTYS TGLLAHSLTS
0201: RGQLVEDVLT SGLSAKLMHY LRVRVIGEAS TSRRDALHTT EAKHVSLKTK EDGRSRVRRV VDTAEGDHVL EADAGRETDV LSEGELEIDG RDRCNVPAVF
0301: DGKMKPGDGN TGRDDPSRNR LSRSKSRARG KVNEGATDTD SLLASPTSGR LGVRDRDQSK NLDVRNAEDG TKWLGKMKSG IMEIEREKND ECFQDCVIGT
0401: KNITDIVKRA VGAAETEARA AHAPDEAVKA AGDAAAELVK TTALEACFKF DFLNEPLGQE FKSSGSEEAA VAAARRAATT VIDAAEVSRN ATCVTSDQTA
0501: GTSSVETDAT VDVGEVSLPD IESLAQLQEK YCIQCLEILG EYVEVLGPVL HEKGVDVCIT LLERTSQLGD SFTLSPLLPD VMKLICALAA HRKFAAMFVD
0601: RGGLQKLLAV PRVTETFYGL SSCLYTIGSL QGIMERVCAL PSDLIHQVVK LAIELLDCSQ DQARKNSALF FAAAFVFRAI LDAFDAHNSL QKLLAILKDA
0701: ASVRTGANSD RSAPEVMTSS EKQMAFHTCF ALRQYFRAHL LLLVESIRPS RSGRGGVPKV PNIRAAHKPL DISNEAVDAV FLQLQKDRKL GPTFVRTQWP
0801: AVNNFLTSSG HVTMLELCQT PPVDRYLHDL LQYAFGVLHI VTSIPDGRKA IVTAALSNNR AGIAVILDAT NISNSIVDPE IIQPALNVLI NLVCPPPSLS
0901: NKPLLAQNHQ PVPDQATARP STDVPADNAP PTPVAPASSG LVGDRRIFLG AGTGSAGLAA KLEQVYRQAR EAVRGNDGIK ILLKLLQPRI YVNPPATPDC
1001: LRALACRVLL GLARDDTIAQ ILTKLEVGRS LSELIRDSGG QSSGTDQVRW QAELTQVALE LIGIVTNSGH ANTLTASDAA TPTLRRIERA AIAAATPITY
1101: DSKELLLLIH EHLQASGLGE TASALLKEAQ LNPLPSLAPP SSIAYSATQE MSAPVAQVQW PSGRASGGFF NSKPEVCAHD EDPNSKCNAA LSAKKKHLAS
1201: STQETSTPDA QPQSTQRINS SSNSDPACGD TSEAVAEKND LDADAQFKTP TFPRKRKLSE LRETEMSTSS KRINLGELGP RTPACPTSAS LRRNSTIAEA
1301: SGFQTPASAL DVNQSGSSRL GQMTPASQLR LPSDPQPSER LSLDSLVVQY LKHQHRQCRA PITTLPPVSL LHPHVCPEPK RLLEAPLNIT DRLGTRELQS
1401: YYSGVHGNRR DRQFVFSRFK SWRSYRDETA LFTSISLLGG TNHLAVGSHA GEIKIFDASS GNMLESVSGH QAPVTLVQSY VSGDTQLLLS SSYSDVQLWD
1501: ASDITVGSKH SFDGCKAAKF SNSGSLIAAL SSEGPTKDVL LYNVETGSLS EKFTDPDTSS RTSPYTLVHF NPCDSLILWN GHLWDRRVPN SCKRFDQFTD
1601: YGGGGFHPSR NEVIINSEVW DLRNMNTRLI RSVPSLDQTA ITFNSRGDVI YAMLRRNIED VMSAVNTRRA KHPLFAAFRT LDAVNYSDIA TIPVDRCLLD
1701: FATEPTDSFL GLITMEDQDD MFSSARMYEI GRRRPTDDDS DPDDDGETED EDEDDEDDED DLDRILGLAG DDSDSGDDDM SSDDNEDNSA SDFDDDDGGM
1801: FFDGGIMEIV SEGDDEDDNG DSDGEDSDDD GDSISSGEED FLNRIH
0001: MDGQEHAEVP NSMVEDDQSV VAAEAIAELA NSTGEPNPEE GEEQSVEDEL IAKAQKLMED ITSVANNPNP NILHALSQLL ESQESLFLEE NGHFSNARGS
0101: HNSGKLCILI RENDEFFELI SSTFLSENSY STAVKAASAR LLMNCSLTWM YPHVFDDAVT ENFKNWVMEE AVKFPGEDSA KKEASDFEML KTYSTGLLAL
0201: SLASRGQIVE DVLTSGLSAK LMHYLRVRVL KEPSTSRIHT TETKHVSLKT KEEGRSRVRK IVDTVEGDHV LETDSGREMG QTDVQPDGEF EIDGRDVFNV
0301: SGVVDCKIKP GDDNSVRDDP SRHRLNRSKS RGRGRVHEGA PDTEVLLASP RLGRLLVRDR DLSKISDGRN AEDVTVCLGK MKSGIMEIER EDNDECFQGC
0401: IIGTKNITDL VKRAVGAAET EARAAHAPDD AAKAAGDAAA ELVKTAALEE FKSSGSEEAA VSAATRAAIT VIDAAEVSRN PTCVTSDQTT DVSEVSLPDI
0501: ESLAQLQEKY CIQCLEILGE YVEVLGPVLH EKGVDVCIVL LERTSQLDDR STVSPLLPDV MKLICALAAH RKFAAMFVER RGILKLLAVP RVSETFYGLS
0601: SCLYTIGSLQ GIMERVCALP LVVIHQVVKL AIELLDCSQD QARKNSALFF AAAFVFRAIL DAFDAQDSLQ KLLAILKDAA SVRTGANTDR SAPEVMTSSE
0701: KQMAFHTCFA LRQYFRAHLL LLVDSIRPSR ISRGGVPSSM KPNIRAAYKP LDISNEAVDA IFLQLQKDRR LGPTFVKAQW PAVNNFLASS GHVTMLELCQ
0801: TPPVDRYLHD LLQYAFGVLH IVTSIPDGRK AIAHATLSNN RAGIAVILDA ANISNSIVDP EIIQPALNVL INLVCPPPSL SNKPPLAQNH QPVPGQATTR
0901: PSTDVAVGTQ STGNAPQTPV APASSGLVGD RRIFLGAGTG SAGLAAKLEQ VYRQAREAVR GNDGIKILLK LLQPRIYVNP PATPDCLRAL ACRVLLGLAR
1001: DDTIAQILTK LEVGKSLSEL IRDSGGQSSG TDQGRWQAEL AQVALELIGI VTNSGHATTL TASDAATPTL RRIERAAIAA ATPITYDSKE LLLLIHEHLQ
1101: ASGLGDTASA LLKEAQLTPL PSSASPSSIA YSTTQEMSTP LAQEQWPSGR ANSGFFTSKP KVCAHDEDPN SRSNAALSAK KKHLASSTLE MPTPVAQQQW
1201: PSGRANCGFC PSIPKINARD EDPSSRGNAA PSAKKKQLTF SPSFSSQSRK QSFSHDALPQ STQRINCCSN SDPALADTSE TAAELVLKND LDADAQFKTP
1301: ISFPRKRKLS ELRDSSVPGK RIDLGERRNS TFADGSGLQT PASALDANQS GSSRLGQMTP ASQLRLPSDP QPSNPERLSL DSLVVQYLKH QHRQCLAPIT
1401: TLPPVSLLHP HVCPEPKRLL EAPLNMTGRL GTRELQSFYS GVHGNRRDRQ FVFSRFKSWR SFRDETALFT CIALLGGTNH IAVGSHAGEI KIFEASSGSM
1501: LESVSGHQAP VTLVQPYVSR DTQLLLSSSS SDVQLWDASS ITGGPRHSFD GCKAAKFSNS GLQFAALSCE ASRKDVLLYD VQTCSPCQKL TDTVTSSRSN
1601: PYSLVHFSPC DTLILWNGVL WDRRIPEKVR RFDQFTDYGG GGFHPSRNEV IINSEIWDMR TFKLLRSVPS LDQTAITFNS RGDVIYAMLR RNIEDVMSAV
1701: HTRRVKHPLF AAFRTLDAIN YSDIATIPVD RCLLDFATEP TDSFLGLITM EDQEDMFSSA RMYEIGRRRP TDDDSDPDDD DETEDEDEDD EEEDDLDRIL
1801: GLAGDNSDSG DDDLSSEDNE DSVSDFDEEA DILIDGDFME ELIEGENEDD GNGEDEDDDD DGEMQDFMSS GEEDDYRDNI RSS
0101: HNSGKLCILI RENDEFFELI SSTFLSENSY STAVKAASAR LLMNCSLTWM YPHVFDDAVT ENFKNWVMEE AVKFPGEDSA KKEASDFEML KTYSTGLLAL
0201: SLASRGQIVE DVLTSGLSAK LMHYLRVRVL KEPSTSRIHT TETKHVSLKT KEEGRSRVRK IVDTVEGDHV LETDSGREMG QTDVQPDGEF EIDGRDVFNV
0301: SGVVDCKIKP GDDNSVRDDP SRHRLNRSKS RGRGRVHEGA PDTEVLLASP RLGRLLVRDR DLSKISDGRN AEDVTVCLGK MKSGIMEIER EDNDECFQGC
0401: IIGTKNITDL VKRAVGAAET EARAAHAPDD AAKAAGDAAA ELVKTAALEE FKSSGSEEAA VSAATRAAIT VIDAAEVSRN PTCVTSDQTT DVSEVSLPDI
0501: ESLAQLQEKY CIQCLEILGE YVEVLGPVLH EKGVDVCIVL LERTSQLDDR STVSPLLPDV MKLICALAAH RKFAAMFVER RGILKLLAVP RVSETFYGLS
0601: SCLYTIGSLQ GIMERVCALP LVVIHQVVKL AIELLDCSQD QARKNSALFF AAAFVFRAIL DAFDAQDSLQ KLLAILKDAA SVRTGANTDR SAPEVMTSSE
0701: KQMAFHTCFA LRQYFRAHLL LLVDSIRPSR ISRGGVPSSM KPNIRAAYKP LDISNEAVDA IFLQLQKDRR LGPTFVKAQW PAVNNFLASS GHVTMLELCQ
0801: TPPVDRYLHD LLQYAFGVLH IVTSIPDGRK AIAHATLSNN RAGIAVILDA ANISNSIVDP EIIQPALNVL INLVCPPPSL SNKPPLAQNH QPVPGQATTR
0901: PSTDVAVGTQ STGNAPQTPV APASSGLVGD RRIFLGAGTG SAGLAAKLEQ VYRQAREAVR GNDGIKILLK LLQPRIYVNP PATPDCLRAL ACRVLLGLAR
1001: DDTIAQILTK LEVGKSLSEL IRDSGGQSSG TDQGRWQAEL AQVALELIGI VTNSGHATTL TASDAATPTL RRIERAAIAA ATPITYDSKE LLLLIHEHLQ
1101: ASGLGDTASA LLKEAQLTPL PSSASPSSIA YSTTQEMSTP LAQEQWPSGR ANSGFFTSKP KVCAHDEDPN SRSNAALSAK KKHLASSTLE MPTPVAQQQW
1201: PSGRANCGFC PSIPKINARD EDPSSRGNAA PSAKKKQLTF SPSFSSQSRK QSFSHDALPQ STQRINCCSN SDPALADTSE TAAELVLKND LDADAQFKTP
1301: ISFPRKRKLS ELRDSSVPGK RIDLGERRNS TFADGSGLQT PASALDANQS GSSRLGQMTP ASQLRLPSDP QPSNPERLSL DSLVVQYLKH QHRQCLAPIT
1401: TLPPVSLLHP HVCPEPKRLL EAPLNMTGRL GTRELQSFYS GVHGNRRDRQ FVFSRFKSWR SFRDETALFT CIALLGGTNH IAVGSHAGEI KIFEASSGSM
1501: LESVSGHQAP VTLVQPYVSR DTQLLLSSSS SDVQLWDASS ITGGPRHSFD GCKAAKFSNS GLQFAALSCE ASRKDVLLYD VQTCSPCQKL TDTVTSSRSN
1601: PYSLVHFSPC DTLILWNGVL WDRRIPEKVR RFDQFTDYGG GGFHPSRNEV IINSEIWDMR TFKLLRSVPS LDQTAITFNS RGDVIYAMLR RNIEDVMSAV
1701: HTRRVKHPLF AAFRTLDAIN YSDIATIPVD RCLLDFATEP TDSFLGLITM EDQEDMFSSA RMYEIGRRRP TDDDSDPDDD DETEDEDEDD EEEDDLDRIL
1801: GLAGDNSDSG DDDLSSEDNE DSVSDFDEEA DILIDGDFME ELIEGENEDD GNGEDEDDDD DGEMQDFMSS GEEDDYRDNI RSS
Arabidopsis Description
DCAF1DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M086]
SUBAcon: [cytosol,nucleus,plasma membrane]
SUBAcon: [cytosol,nucleus,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.