Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G31160.1 | KXG22678 | AT4G05420.1 | 18552200 |
| AT4G31160.1 | EER93338 | AT5G46210.1 | 18552200 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d026691_P004 | Maize | cytosol | 93.63 | 93.68 |
| Os04t0691200-00 | Rice | cytosol | 26.51 | 80.25 |
| TraesCS2B01G630100.1 | Wheat | nucleus | 61.27 | 77.24 |
| HORVU2Hr1G126010.3 | Barley | cytosol | 71.71 | 74.31 |
| TraesCS2D01G576800.1 | Wheat | cytosol | 71.71 | 72.24 |
| TraesCS2A01G566600.1 | Wheat | nucleus | 71.71 | 72.24 |
| GSMUA_Achr3P22370_001 | Banana | cytosol | 50.78 | 58.54 |
| GSMUA_Achr7P23160_001 | Banana | plasma membrane, plastid, vacuole | 50.63 | 56.66 |
| VIT_04s0008g03060.t01 | Wine grape | cytosol, nucleus, plasma membrane | 54.75 | 53.33 |
| Solyc08g074370.2.1 | Tomato | nucleus | 51.67 | 52.63 |
| KRH52554 | Soybean | nucleus | 52.51 | 52.31 |
| KRH61892 | Soybean | cytosol | 52.45 | 51.78 |
| CDY13413 | Canola | nucleus | 44.0 | 48.23 |
| CDX72295 | Canola | cytosol, nucleus, plastid | 43.95 | 48.03 |
| CDY36454 | Canola | nucleus | 45.93 | 47.85 |
| CDY23283 | Canola | nucleus | 45.62 | 47.35 |
| Bra024021.1-P | Field mustard | nucleus | 43.84 | 46.67 |
| AT4G31160.1 | Thale cress | cytosol, nucleus, plasma membrane | 45.25 | 46.04 |
| Bra010248.1-P | Field mustard | nucleus | 45.56 | 45.83 |
| KRH16085 | Soybean | cytosol | 16.7 | 44.69 |
| VIT_15s0021g02350.t01 | Wine grape | nucleus | 5.9 | 32.85 |
| CDY03208 | Canola | nucleus | 3.08 | 30.41 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:35.1 | EntrezGene:8076518 | InterPro:ARM-type_fold | UniProt:C5YB39 | EnsemblPlants:EES13157 |
| ProteinID:EES13157 | ProteinID:EES13157.1 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009793 | GO:GO:0009908 |
| GO:GO:0009987 | GO:GO:0010154 | GO:GO:0016567 | GO:GO:0019538 | GO:GO:0048366 | GO:GO:0048367 |
| GO:GO:0048827 | InterPro:IPR001680 | InterPro:IPR006594 | InterPro:IPR015943 | InterPro:LisH | PFscan:PS50896 |
| PANTHER:PTHR13129 | SMART:SM00320 | SMART:SM00667 | EnsemblPlantsGene:SORBI_3006G279200 | SUPFAM:SSF48371 | SUPFAM:SSF50978 |
| unigene:Sbi.9382 | UniParc:UPI0001A87676 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom_sf | RefSeq:XP_002448829.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:60943583..60952663
Molecular Weight (calculated)
208373.0 Da
IEP (calculated)
4.988
GRAVY (calculated)
-0.333
Length
1916 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAESGKEAAA AAAAAPEPGS GPPHEDEDAL LARAHTVISR ILDRELDPNP RLLHTLATMC ELHEARYIEL CAADPTFNNT NTRTTSTIGK LANLLRDNDE
0101: FYELVFCKFL SDTSYSVAVR AAAARLLLSC QSAWTPPYPH VFEDSIIDNI KKWVTEDPEA SNECEWKYLG KNKPTDAEML RTYAIGLLAM ALCSGGQLVE
0201: DVLTLGVSAK LMRFLRIRVL GDSSSSQRDA NHPQDTKYPR GRDDSRGKSR LAQDGSRLDG TRVGYGVLLT NPTAEKDNEP GVGMRQAYGE RSLDDTVASL
0301: DNSDVPEADW TNDRCYGTSV CDTKSKYGEK NSVTRLLKDE EISENGEVLK RKLGRAPSRL RVKGKSGDNL PECEMTPLSP TSGLRIGGRP TRDRNVVRVD
0401: DPKKATDVNN RSAGLESFSA ISKEEYEDRF RDCIIGLKDI SDIVLKAVRA AEAEARSANA PDEAVKAAGD AAAELVKSAA LEVWKSENNS DAVVVAAEKA
0501: ASAVVEAAVS TSVSRSANQV GEERAVEEAV QTSEDQDLEN FVISDKAQLL QLREKYSIQC LQILGEYVEA LGPVLHEKGV DVCLTLLQRG MKDQEGRDHF
0601: AQLPDVLKLI CALAAHRKFA ALFVDRGGIQ KILSIPRITQ TYMGLSACLF TFGSLQSTME RVCALSSDTL DSVVELALQL LECPQDLARK NVAIFFAAAF
0701: VFKAVLDLFD ARDGMQKLLD ILCGCASGRS GSNSGGAGSS NVNQRNDRPP AEVLTASEKQ VAYHTCVALR QYFRAHLLQL VDSIRPSKSI RSIARNTSSA
0801: RAGYKPFDIS NEAMDAVFRQ IQRDRKLGLA LVRARWPVLD KFVASNGHMT MLELCKFQAH GDRYLRDLTQ YAIGVLHIIT LMPQPHVRKS IVQGTLSNNR
0901: AGMAVLLDTV KSLDYIDHEV ICPALNVLVN LVCPPPSISN KPLSTANQQP AAAQALASES RDKNFEKSIL DRNLLANQGE SRERSGDGNP AERNNTLHQG
1001: TPSTPVVPSG VVGDRRITLG VGGGGPGLAA QLEQGYRQAR EVVRANNGIK ILLQLLGSRM VTHPVAIDSI RALACRVLLG LARDDTIAHI LTKLQVGKKL
1101: SELIRDTSAQ TSGGDNGRWQ AELTQVAIEL IAVLTNSGKE TTLAATDAAA PALRRIERAG IAAATPISYH SRELMQLIHE HLLGSGFTAT AAMLQKEAGL
1201: APLPLTAAVL PAHQVAALEA SSVQQQWPSG RVQGFLSDKI NMSTDQSAQR SDSILPSSKK KALTFSSSFS RRALSPHPIS GSRASNILKS PVPIAADIGD
1301: AEMLNKTPLS LPLKRKLVDV KDNNSASASK RLAATDQMYQ PSAFQTPAPT RKGLSVAVDS PTSFQCGRTN FNNISTDNLD NSQGTPGALT TTALPGVNDQ
1401: QSGNLERMTL DSLVVQYLKH QHRQCPAPVT TLPPLSLLHP HVCPEPSRSL SAPANIAARM GSREISRQFS GIQIPRRDRH FIYSRFKQCR VCRDEASLLT
1501: CMTFLGDASR VAAGNHTGEL RIFDCNTANL LETQTCHQHL VTMMESTYSG GNELILTSSL NEVKIWDAYS LSAGPLHTFD DCKAARFNHS GTSFAALSTD
1601: TAQREVQLYD VQTYTLATRL PDNTSSSGSG RGYVQPIIHF SPSDTMLLWN GVLWDTRQPT PVHQFDQFTD YCGGGFHPAG NEVILNSEVW DLRKFKLLRS
1701: VPSLDQTVIK FNGTGDVIYA ILRRNLEDVT ASINARRVRQ PLFPAFRTID AVTYSDIATV QIDRCVLDLA TEPNDSLIGV VAMDDHQELF SSARLFEVGR
1801: KRITDDDSDP EDAGESDDED DDDNDDSDDD VLLAPVLEGD TDSEELSSSG DDGDEDGGDD IPSSDDIEDD PEFIDDGGDF EGGGDLMDLL GDDEGEDDES
1901: DTMESFSSGD EEGWIM
0101: FYELVFCKFL SDTSYSVAVR AAAARLLLSC QSAWTPPYPH VFEDSIIDNI KKWVTEDPEA SNECEWKYLG KNKPTDAEML RTYAIGLLAM ALCSGGQLVE
0201: DVLTLGVSAK LMRFLRIRVL GDSSSSQRDA NHPQDTKYPR GRDDSRGKSR LAQDGSRLDG TRVGYGVLLT NPTAEKDNEP GVGMRQAYGE RSLDDTVASL
0301: DNSDVPEADW TNDRCYGTSV CDTKSKYGEK NSVTRLLKDE EISENGEVLK RKLGRAPSRL RVKGKSGDNL PECEMTPLSP TSGLRIGGRP TRDRNVVRVD
0401: DPKKATDVNN RSAGLESFSA ISKEEYEDRF RDCIIGLKDI SDIVLKAVRA AEAEARSANA PDEAVKAAGD AAAELVKSAA LEVWKSENNS DAVVVAAEKA
0501: ASAVVEAAVS TSVSRSANQV GEERAVEEAV QTSEDQDLEN FVISDKAQLL QLREKYSIQC LQILGEYVEA LGPVLHEKGV DVCLTLLQRG MKDQEGRDHF
0601: AQLPDVLKLI CALAAHRKFA ALFVDRGGIQ KILSIPRITQ TYMGLSACLF TFGSLQSTME RVCALSSDTL DSVVELALQL LECPQDLARK NVAIFFAAAF
0701: VFKAVLDLFD ARDGMQKLLD ILCGCASGRS GSNSGGAGSS NVNQRNDRPP AEVLTASEKQ VAYHTCVALR QYFRAHLLQL VDSIRPSKSI RSIARNTSSA
0801: RAGYKPFDIS NEAMDAVFRQ IQRDRKLGLA LVRARWPVLD KFVASNGHMT MLELCKFQAH GDRYLRDLTQ YAIGVLHIIT LMPQPHVRKS IVQGTLSNNR
0901: AGMAVLLDTV KSLDYIDHEV ICPALNVLVN LVCPPPSISN KPLSTANQQP AAAQALASES RDKNFEKSIL DRNLLANQGE SRERSGDGNP AERNNTLHQG
1001: TPSTPVVPSG VVGDRRITLG VGGGGPGLAA QLEQGYRQAR EVVRANNGIK ILLQLLGSRM VTHPVAIDSI RALACRVLLG LARDDTIAHI LTKLQVGKKL
1101: SELIRDTSAQ TSGGDNGRWQ AELTQVAIEL IAVLTNSGKE TTLAATDAAA PALRRIERAG IAAATPISYH SRELMQLIHE HLLGSGFTAT AAMLQKEAGL
1201: APLPLTAAVL PAHQVAALEA SSVQQQWPSG RVQGFLSDKI NMSTDQSAQR SDSILPSSKK KALTFSSSFS RRALSPHPIS GSRASNILKS PVPIAADIGD
1301: AEMLNKTPLS LPLKRKLVDV KDNNSASASK RLAATDQMYQ PSAFQTPAPT RKGLSVAVDS PTSFQCGRTN FNNISTDNLD NSQGTPGALT TTALPGVNDQ
1401: QSGNLERMTL DSLVVQYLKH QHRQCPAPVT TLPPLSLLHP HVCPEPSRSL SAPANIAARM GSREISRQFS GIQIPRRDRH FIYSRFKQCR VCRDEASLLT
1501: CMTFLGDASR VAAGNHTGEL RIFDCNTANL LETQTCHQHL VTMMESTYSG GNELILTSSL NEVKIWDAYS LSAGPLHTFD DCKAARFNHS GTSFAALSTD
1601: TAQREVQLYD VQTYTLATRL PDNTSSSGSG RGYVQPIIHF SPSDTMLLWN GVLWDTRQPT PVHQFDQFTD YCGGGFHPAG NEVILNSEVW DLRKFKLLRS
1701: VPSLDQTVIK FNGTGDVIYA ILRRNLEDVT ASINARRVRQ PLFPAFRTID AVTYSDIATV QIDRCVLDLA TEPNDSLIGV VAMDDHQELF SSARLFEVGR
1801: KRITDDDSDP EDAGESDDED DDDNDDSDDD VLLAPVLEGD TDSEELSSSG DDGDEDGGDD IPSSDDIEDD PEFIDDGGDF EGGGDLMDLL GDDEGEDDES
1901: DTMESFSSGD EEGWIM
0001: MDGQEHAEVP NSMVEDDQSV VAAEAIAELA NSTGEPNPEE GEEQSVEDEL IAKAQKLMED ITSVANNPNP NILHALSQLL ESQESLFLEE NGHFSNARGS
0101: HNSGKLCILI RENDEFFELI SSTFLSENSY STAVKAASAR LLMNCSLTWM YPHVFDDAVT ENFKNWVMEE AVKFPGEDSA KKEASDFEML KTYSTGLLAL
0201: SLASRGQIVE DVLTSGLSAK LMHYLRVRVL KEPSTSRIHT TETKHVSLKT KEEGRSRVRK IVDTVEGDHV LETDSGREMG QTDVQPDGEF EIDGRDVFNV
0301: SGVVDCKIKP GDDNSVRDDP SRHRLNRSKS RGRGRVHEGA PDTEVLLASP RLGRLLVRDR DLSKISDGRN AEDVTVCLGK MKSGIMEIER EDNDECFQGC
0401: IIGTKNITDL VKRAVGAAET EARAAHAPDD AAKAAGDAAA ELVKTAALEE FKSSGSEEAA VSAATRAAIT VIDAAEVSRN PTCVTSDQTT DVSEVSLPDI
0501: ESLAQLQEKY CIQCLEILGE YVEVLGPVLH EKGVDVCIVL LERTSQLDDR STVSPLLPDV MKLICALAAH RKFAAMFVER RGILKLLAVP RVSETFYGLS
0601: SCLYTIGSLQ GIMERVCALP LVVIHQVVKL AIELLDCSQD QARKNSALFF AAAFVFRAIL DAFDAQDSLQ KLLAILKDAA SVRTGANTDR SAPEVMTSSE
0701: KQMAFHTCFA LRQYFRAHLL LLVDSIRPSR ISRGGVPSSM KPNIRAAYKP LDISNEAVDA IFLQLQKDRR LGPTFVKAQW PAVNNFLASS GHVTMLELCQ
0801: TPPVDRYLHD LLQYAFGVLH IVTSIPDGRK AIAHATLSNN RAGIAVILDA ANISNSIVDP EIIQPALNVL INLVCPPPSL SNKPPLAQNH QPVPGQATTR
0901: PSTDVAVGTQ STGNAPQTPV APASSGLVGD RRIFLGAGTG SAGLAAKLEQ VYRQAREAVR GNDGIKILLK LLQPRIYVNP PATPDCLRAL ACRVLLGLAR
1001: DDTIAQILTK LEVGKSLSEL IRDSGGQSSG TDQGRWQAEL AQVALELIGI VTNSGHATTL TASDAATPTL RRIERAAIAA ATPITYDSKE LLLLIHEHLQ
1101: ASGLGDTASA LLKEAQLTPL PSSASPSSIA YSTTQEMSTP LAQEQWPSGR ANSGFFTSKP KVCAHDEDPN SRSNAALSAK KKHLASSTLE MPTPVAQQQW
1201: PSGRANCGFC PSIPKINARD EDPSSRGNAA PSAKKKQLTF SPSFSSQSRK QSFSHDALPQ STQRINCCSN SDPALADTSE TAAELVLKND LDADAQFKTP
1301: ISFPRKRKLS ELRDSSVPGK RIDLGERRNS TFADGSGLQT PASALDANQS GSSRLGQMTP ASQLRLPSDP QPSNPERLSL DSLVVQYLKH QHRQCLAPIT
1401: TLPPVSLLHP HVCPEPKRLL EAPLNMTGRL GTRELQSFYS GVHGNRRDRQ FVFSRFKSWR SFRDETALFT CIALLGGTNH IAVGSHAGEI KIFEASSGSM
1501: LESVSGHQAP VTLVQPYVSR DTQLLLSSSS SDVQLWDASS ITGGPRHSFD GCKAAKFSNS GLQFAALSCE ASRKDVLLYD VQTCSPCQKL TDTVTSSRSN
1601: PYSLVHFSPC DTLILWNGVL WDRRIPEKVR RFDQFTDYGG GGFHPSRNEV IINSEIWDMR TFKLLRSVPS LDQTAITFNS RGDVIYAMLR RNIEDVMSAV
1701: HTRRVKHPLF AAFRTLDAIN YSDIATIPVD RCLLDFATEP TDSFLGLITM EDQEDMFSSA RMYEIGRRRP TDDDSDPDDD DETEDEDEDD EEEDDLDRIL
1801: GLAGDNSDSG DDDLSSEDNE DSVSDFDEEA DILIDGDFME ELIEGENEDD GNGEDEDDDD DGEMQDFMSS GEEDDYRDNI RSS
0101: HNSGKLCILI RENDEFFELI SSTFLSENSY STAVKAASAR LLMNCSLTWM YPHVFDDAVT ENFKNWVMEE AVKFPGEDSA KKEASDFEML KTYSTGLLAL
0201: SLASRGQIVE DVLTSGLSAK LMHYLRVRVL KEPSTSRIHT TETKHVSLKT KEEGRSRVRK IVDTVEGDHV LETDSGREMG QTDVQPDGEF EIDGRDVFNV
0301: SGVVDCKIKP GDDNSVRDDP SRHRLNRSKS RGRGRVHEGA PDTEVLLASP RLGRLLVRDR DLSKISDGRN AEDVTVCLGK MKSGIMEIER EDNDECFQGC
0401: IIGTKNITDL VKRAVGAAET EARAAHAPDD AAKAAGDAAA ELVKTAALEE FKSSGSEEAA VSAATRAAIT VIDAAEVSRN PTCVTSDQTT DVSEVSLPDI
0501: ESLAQLQEKY CIQCLEILGE YVEVLGPVLH EKGVDVCIVL LERTSQLDDR STVSPLLPDV MKLICALAAH RKFAAMFVER RGILKLLAVP RVSETFYGLS
0601: SCLYTIGSLQ GIMERVCALP LVVIHQVVKL AIELLDCSQD QARKNSALFF AAAFVFRAIL DAFDAQDSLQ KLLAILKDAA SVRTGANTDR SAPEVMTSSE
0701: KQMAFHTCFA LRQYFRAHLL LLVDSIRPSR ISRGGVPSSM KPNIRAAYKP LDISNEAVDA IFLQLQKDRR LGPTFVKAQW PAVNNFLASS GHVTMLELCQ
0801: TPPVDRYLHD LLQYAFGVLH IVTSIPDGRK AIAHATLSNN RAGIAVILDA ANISNSIVDP EIIQPALNVL INLVCPPPSL SNKPPLAQNH QPVPGQATTR
0901: PSTDVAVGTQ STGNAPQTPV APASSGLVGD RRIFLGAGTG SAGLAAKLEQ VYRQAREAVR GNDGIKILLK LLQPRIYVNP PATPDCLRAL ACRVLLGLAR
1001: DDTIAQILTK LEVGKSLSEL IRDSGGQSSG TDQGRWQAEL AQVALELIGI VTNSGHATTL TASDAATPTL RRIERAAIAA ATPITYDSKE LLLLIHEHLQ
1101: ASGLGDTASA LLKEAQLTPL PSSASPSSIA YSTTQEMSTP LAQEQWPSGR ANSGFFTSKP KVCAHDEDPN SRSNAALSAK KKHLASSTLE MPTPVAQQQW
1201: PSGRANCGFC PSIPKINARD EDPSSRGNAA PSAKKKQLTF SPSFSSQSRK QSFSHDALPQ STQRINCCSN SDPALADTSE TAAELVLKND LDADAQFKTP
1301: ISFPRKRKLS ELRDSSVPGK RIDLGERRNS TFADGSGLQT PASALDANQS GSSRLGQMTP ASQLRLPSDP QPSNPERLSL DSLVVQYLKH QHRQCLAPIT
1401: TLPPVSLLHP HVCPEPKRLL EAPLNMTGRL GTRELQSFYS GVHGNRRDRQ FVFSRFKSWR SFRDETALFT CIALLGGTNH IAVGSHAGEI KIFEASSGSM
1501: LESVSGHQAP VTLVQPYVSR DTQLLLSSSS SDVQLWDASS ITGGPRHSFD GCKAAKFSNS GLQFAALSCE ASRKDVLLYD VQTCSPCQKL TDTVTSSRSN
1601: PYSLVHFSPC DTLILWNGVL WDRRIPEKVR RFDQFTDYGG GGFHPSRNEV IINSEIWDMR TFKLLRSVPS LDQTAITFNS RGDVIYAMLR RNIEDVMSAV
1701: HTRRVKHPLF AAFRTLDAIN YSDIATIPVD RCLLDFATEP TDSFLGLITM EDQEDMFSSA RMYEIGRRRP TDDDSDPDDD DETEDEDEDD EEEDDLDRIL
1801: GLAGDNSDSG DDDLSSEDNE DSVSDFDEEA DILIDGDFME ELIEGENEDD GNGEDEDDDD DGEMQDFMSS GEEDDYRDNI RSS
Arabidopsis Description
DCAF1DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M086]
SUBAcon: [cytosol,nucleus,plasma membrane]
SUBAcon: [cytosol,nucleus,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.