Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH52554 | Soybean | nucleus | 92.89 | 93.76 |
| VIT_04s0008g03060.t01 | Wine grape | cytosol, nucleus, plasma membrane | 72.39 | 71.43 |
| Solyc08g074370.2.1 | Tomato | nucleus | 64.66 | 66.72 |
| KRH16085 | Soybean | cytosol | 22.82 | 61.87 |
| GSMUA_Achr3P22370_001 | Banana | cytosol | 52.45 | 61.25 |
| GSMUA_Achr7P23160_001 | Banana | plasma membrane, plastid, vacuole | 53.68 | 60.86 |
| CDX72295 | Canola | cytosol, nucleus, plastid | 53.94 | 59.73 |
| CDY36454 | Canola | nucleus | 56.52 | 59.65 |
| CDY23283 | Canola | nucleus | 56.52 | 59.43 |
| CDY13413 | Canola | nucleus | 53.43 | 59.32 |
| AT4G31160.1 | Thale cress | cytosol, nucleus, plasma membrane | 56.93 | 58.68 |
| Bra010248.1-P | Field mustard | nucleus | 56.57 | 57.64 |
| Bra024021.1-P | Field mustard | nucleus | 53.37 | 57.56 |
| TraesCS2B01G630100.1 | Wheat | nucleus | 44.87 | 57.3 |
| Os04t0691200-00 | Rice | cytosol | 17.57 | 53.87 |
| HORVU2Hr1G126010.3 | Barley | cytosol | 50.85 | 53.38 |
| EES13157 | Sorghum | cytosol | 51.78 | 52.45 |
| TraesCS2A01G566600.1 | Wheat | nucleus | 51.37 | 52.42 |
| TraesCS2D01G576800.1 | Wheat | cytosol | 51.21 | 52.26 |
| Zm00001d026691_P004 | Maize | cytosol | 51.31 | 52.01 |
| Zm00001d002933_P014 | Maize | cytosol | 49.97 | 51.0 |
| VIT_15s0021g02350.t01 | Wine grape | nucleus | 7.26 | 40.99 |
| CDY03208 | Canola | nucleus | 3.61 | 36.08 |
Protein Annotations
| EntrezGene:100796030 | Gene3D:2.130.10.10 | MapMan:35.1 | UniProt:A0A0R0KDG3 | EMBL:ACUP02002198 | InterPro:ARM-type_fold |
| EnsemblPlantsGene:GLYMA_04G073900 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0019538 | InterPro:IPR001680 | InterPro:IPR006594 |
| InterPro:IPR015943 | InterPro:IPR017986 | EnsemblPlants:KRH61892 | ProteinID:KRH61892 | ProteinID:KRH61892.1 | InterPro:LisH |
| PFscan:PS50294 | PFscan:PS50896 | PANTHER:PTHR13129 | SMART:SM00320 | SMART:SM00667 | SUPFAM:SSF48371 |
| SUPFAM:SSF50978 | UniParc:UPI0003DE8A01 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:6148880..6158162
Molecular Weight (calculated)
212162.0 Da
IEP (calculated)
4.988
GRAVY (calculated)
-0.369
Length
1941 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSLMMEDQAN QVPPPRDEEE DSQKEEVIAK VNKLMEKITS APDNPNATVL HALASILEAQ ESRYMEENGH SSSITARAAH IIGRLGGLIR ENDEFFELIS
0101: SKFLLETRYS TSIQAAAGRL LLCCSLTWIY PHVFEESVME NIKNWVMDDN TGLPAEEQNL KHNPDRRDAA SDSEMLKTYS TGLLAVCLVG QGPIVEDVLT
0201: SGLSAKLMRY LRISVLRETS GNQKDVTHIT ESRHASANTS GRGRDDGRGR FRQLLESNHL DDTRMIDERS LDDVTLERGP DRSISGQTCQ EGSWIDGEPP
0301: DGLGGEGADV HEVDSDGEDR WHCRDIRDGR IKYGEHDDNI RDDSSRRRAN RGWGRSRGKG RLSEGVVESD PILSSPGSGS RLGQGRSVRD RSILRNADIR
0401: RVTDSKKTLG RTTPSEASAS ASEREDNDDC FQECRIGSKD ITDLVRKAVR AAEAEARSAN APEEAVKAAG DAAADLVKTA ASEEYKSTND EEAAFLAASR
0501: AASTVIDAAS AVEVSRSSIC DSTVTENVSG KEMETNEDVE EYFIPDTQSL AQLREKYCIQ CLELLGEYVE VLGPVLHEKG VDVCLALLQQ NSKHWEASKV
0601: ALLLPDIMKL ICALAAHRKF AALFVDRGGM QKLLDVPRMP QTFFGLSSCL FTIGSLQGIM ERVCALPSKV VERVVELALQ LLDCNQDQAR KNAALFFAAA
0701: FVFRAVLDAF DSLDGLQKLL GLLNDAASVR SGVNSGALSL SNSGSLRNDR SSAEVLTSSE KQIAYHTCVA LRQYFRAHLL VLVDSIRPNK SNRSAARNIP
0801: SVRAVYKPLD ISNEAMDAVF LQLQKDRKLG PAFVRTRWLA VEKFLASNGH ITMLELCQAP PVERYLHDLL QYALGVLHIV TLVPSSRKMI VNVTLSNNRV
0901: GIAVILDAAN IASNHVDPEI IQPALNVLVN LVCPPPSISN KPAMFAQGQQ FASSQTSIGP PSEARDRNAE RNVSDRAVHS TSQIDPRERS GEPNAVDRGS
1001: AAGFSTQPVH STPQTPVASA SSGLVGDRRI SLGAGAGCAG LAAQLEQGYR QAREVVRSNN GIKVLLHLLQ PRIYSPPAAL DCLRALACRV LLGLARDDTI
1101: AHILTKLQVG KKLSELIRDS GSLTLGTEQG RWQAELSQAA IELIGIVTNS GRASTLAATD AATPTLRRIE RAAIAAATPI SYHSRELLLL IHEHLQASGL
1201: AQTASMLLKE AQLTPLPSLV PPSSLAQQPI TQEVSSTQIQ WPSGRAPSGF LTYRVMFNAK DEDAGLKSDS VSAKKKSLTF SSSFHSRLQL LDSQSSARKL
1301: SNTGKESSET SVVETTYGSS VKHNIDTGSQ FKTPITLPAK RKLSDLKDIS MFSSSGKRLN IGDQGLRSPI CSSAIRKSSL QTDAVGLFTP TCNLKQSRCT
1401: IDLVDENQSI SNLGQMTPSS QVLNDLQPNN AERVTLDSLV VQYLKHQHRQ CPAPITTLPP LSLLHPHVCP EPKRSLDAPS NVTARFGTRE FKYMYGGVHG
1501: NRRDRQFVYS RFKPWRTCRD DAGALLTCIT FVGDSSHIAV GSHNGELKFF DSNNSNVVES YTGHQSPLTH VQSFVSGETQ LLLSSSSQDV RLWDATSILG
1601: GPSHSFEGCK AARFSNSGNV FAALSSESAR REIRLYDIQT CHLESNFSDT FAASTGRGHV YSLIHFNPSD SMLLWNGVLW DRRDSGPVHR FDQFTDYGGG
1701: GFHPAGNEVI INSEVWDLRK FRLLRSVPSL DQTSITFNAR GDVMYAILRR NLEDVMSAVH TRRVKHPLFA AFRTVDAINY SDIATIPVDR CVLDFAAEPT
1801: DSFVGLITMD DQDEMYASAR IYEIGRRRPT DDDSDPDDAE SEEEDEDDDD DDPDVDPLLS PGLGGDSGSD ADDMSNDDDD SVSDLDEDED GDFILDDVDF
1901: DGGPGILEIV TEGDEEDDDS QLLESLSSSD DEDFVGNGFG Y
0101: SKFLLETRYS TSIQAAAGRL LLCCSLTWIY PHVFEESVME NIKNWVMDDN TGLPAEEQNL KHNPDRRDAA SDSEMLKTYS TGLLAVCLVG QGPIVEDVLT
0201: SGLSAKLMRY LRISVLRETS GNQKDVTHIT ESRHASANTS GRGRDDGRGR FRQLLESNHL DDTRMIDERS LDDVTLERGP DRSISGQTCQ EGSWIDGEPP
0301: DGLGGEGADV HEVDSDGEDR WHCRDIRDGR IKYGEHDDNI RDDSSRRRAN RGWGRSRGKG RLSEGVVESD PILSSPGSGS RLGQGRSVRD RSILRNADIR
0401: RVTDSKKTLG RTTPSEASAS ASEREDNDDC FQECRIGSKD ITDLVRKAVR AAEAEARSAN APEEAVKAAG DAAADLVKTA ASEEYKSTND EEAAFLAASR
0501: AASTVIDAAS AVEVSRSSIC DSTVTENVSG KEMETNEDVE EYFIPDTQSL AQLREKYCIQ CLELLGEYVE VLGPVLHEKG VDVCLALLQQ NSKHWEASKV
0601: ALLLPDIMKL ICALAAHRKF AALFVDRGGM QKLLDVPRMP QTFFGLSSCL FTIGSLQGIM ERVCALPSKV VERVVELALQ LLDCNQDQAR KNAALFFAAA
0701: FVFRAVLDAF DSLDGLQKLL GLLNDAASVR SGVNSGALSL SNSGSLRNDR SSAEVLTSSE KQIAYHTCVA LRQYFRAHLL VLVDSIRPNK SNRSAARNIP
0801: SVRAVYKPLD ISNEAMDAVF LQLQKDRKLG PAFVRTRWLA VEKFLASNGH ITMLELCQAP PVERYLHDLL QYALGVLHIV TLVPSSRKMI VNVTLSNNRV
0901: GIAVILDAAN IASNHVDPEI IQPALNVLVN LVCPPPSISN KPAMFAQGQQ FASSQTSIGP PSEARDRNAE RNVSDRAVHS TSQIDPRERS GEPNAVDRGS
1001: AAGFSTQPVH STPQTPVASA SSGLVGDRRI SLGAGAGCAG LAAQLEQGYR QAREVVRSNN GIKVLLHLLQ PRIYSPPAAL DCLRALACRV LLGLARDDTI
1101: AHILTKLQVG KKLSELIRDS GSLTLGTEQG RWQAELSQAA IELIGIVTNS GRASTLAATD AATPTLRRIE RAAIAAATPI SYHSRELLLL IHEHLQASGL
1201: AQTASMLLKE AQLTPLPSLV PPSSLAQQPI TQEVSSTQIQ WPSGRAPSGF LTYRVMFNAK DEDAGLKSDS VSAKKKSLTF SSSFHSRLQL LDSQSSARKL
1301: SNTGKESSET SVVETTYGSS VKHNIDTGSQ FKTPITLPAK RKLSDLKDIS MFSSSGKRLN IGDQGLRSPI CSSAIRKSSL QTDAVGLFTP TCNLKQSRCT
1401: IDLVDENQSI SNLGQMTPSS QVLNDLQPNN AERVTLDSLV VQYLKHQHRQ CPAPITTLPP LSLLHPHVCP EPKRSLDAPS NVTARFGTRE FKYMYGGVHG
1501: NRRDRQFVYS RFKPWRTCRD DAGALLTCIT FVGDSSHIAV GSHNGELKFF DSNNSNVVES YTGHQSPLTH VQSFVSGETQ LLLSSSSQDV RLWDATSILG
1601: GPSHSFEGCK AARFSNSGNV FAALSSESAR REIRLYDIQT CHLESNFSDT FAASTGRGHV YSLIHFNPSD SMLLWNGVLW DRRDSGPVHR FDQFTDYGGG
1701: GFHPAGNEVI INSEVWDLRK FRLLRSVPSL DQTSITFNAR GDVMYAILRR NLEDVMSAVH TRRVKHPLFA AFRTVDAINY SDIATIPVDR CVLDFAAEPT
1801: DSFVGLITMD DQDEMYASAR IYEIGRRRPT DDDSDPDDAE SEEEDEDDDD DDPDVDPLLS PGLGGDSGSD ADDMSNDDDD SVSDLDEDED GDFILDDVDF
1901: DGGPGILEIV TEGDEEDDDS QLLESLSSSD DEDFVGNGFG Y
0001: MDGQEHAEVP NSMVEDDQSV VAAEAIAELA NSTGEPNPEE GEEQSVEDEL IAKAQKLMED ITSVANNPNP NILHALSQLL ESQESLFLEE NGHFSNARGS
0101: HNSGKLCILI RENDEFFELI SSTFLSENSY STAVKAASAR LLMNCSLTWM YPHVFDDAVT ENFKNWVMEE AVKFPGEDSA KKEASDFEML KTYSTGLLAL
0201: SLASRGQIVE DVLTSGLSAK LMHYLRVRVL KEPSTSRIHT TETKHVSLKT KEEGRSRVRK IVDTVEGDHV LETDSGREMG QTDVQPDGEF EIDGRDVFNV
0301: SGVVDCKIKP GDDNSVRDDP SRHRLNRSKS RGRGRVHEGA PDTEVLLASP RLGRLLVRDR DLSKISDGRN AEDVTVCLGK MKSGIMEIER EDNDECFQGC
0401: IIGTKNITDL VKRAVGAAET EARAAHAPDD AAKAAGDAAA ELVKTAALEE FKSSGSEEAA VSAATRAAIT VIDAAEVSRN PTCVTSDQTT DVSEVSLPDI
0501: ESLAQLQEKY CIQCLEILGE YVEVLGPVLH EKGVDVCIVL LERTSQLDDR STVSPLLPDV MKLICALAAH RKFAAMFVER RGILKLLAVP RVSETFYGLS
0601: SCLYTIGSLQ GIMERVCALP LVVIHQVVKL AIELLDCSQD QARKNSALFF AAAFVFRAIL DAFDAQDSLQ KLLAILKDAA SVRTGANTDR SAPEVMTSSE
0701: KQMAFHTCFA LRQYFRAHLL LLVDSIRPSR ISRGGVPSSM KPNIRAAYKP LDISNEAVDA IFLQLQKDRR LGPTFVKAQW PAVNNFLASS GHVTMLELCQ
0801: TPPVDRYLHD LLQYAFGVLH IVTSIPDGRK AIAHATLSNN RAGIAVILDA ANISNSIVDP EIIQPALNVL INLVCPPPSL SNKPPLAQNH QPVPGQATTR
0901: PSTDVAVGTQ STGNAPQTPV APASSGLVGD RRIFLGAGTG SAGLAAKLEQ VYRQAREAVR GNDGIKILLK LLQPRIYVNP PATPDCLRAL ACRVLLGLAR
1001: DDTIAQILTK LEVGKSLSEL IRDSGGQSSG TDQGRWQAEL AQVALELIGI VTNSGHATTL TASDAATPTL RRIERAAIAA ATPITYDSKE LLLLIHEHLQ
1101: ASGLGDTASA LLKEAQLTPL PSSASPSSIA YSTTQEMSTP LAQEQWPSGR ANSGFFTSKP KVCAHDEDPN SRSNAALSAK KKHLASSTLE MPTPVAQQQW
1201: PSGRANCGFC PSIPKINARD EDPSSRGNAA PSAKKKQLTF SPSFSSQSRK QSFSHDALPQ STQRINCCSN SDPALADTSE TAAELVLKND LDADAQFKTP
1301: ISFPRKRKLS ELRDSSVPGK RIDLGERRNS TFADGSGLQT PASALDANQS GSSRLGQMTP ASQLRLPSDP QPSNPERLSL DSLVVQYLKH QHRQCLAPIT
1401: TLPPVSLLHP HVCPEPKRLL EAPLNMTGRL GTRELQSFYS GVHGNRRDRQ FVFSRFKSWR SFRDETALFT CIALLGGTNH IAVGSHAGEI KIFEASSGSM
1501: LESVSGHQAP VTLVQPYVSR DTQLLLSSSS SDVQLWDASS ITGGPRHSFD GCKAAKFSNS GLQFAALSCE ASRKDVLLYD VQTCSPCQKL TDTVTSSRSN
1601: PYSLVHFSPC DTLILWNGVL WDRRIPEKVR RFDQFTDYGG GGFHPSRNEV IINSEIWDMR TFKLLRSVPS LDQTAITFNS RGDVIYAMLR RNIEDVMSAV
1701: HTRRVKHPLF AAFRTLDAIN YSDIATIPVD RCLLDFATEP TDSFLGLITM EDQEDMFSSA RMYEIGRRRP TDDDSDPDDD DETEDEDEDD EEEDDLDRIL
1801: GLAGDNSDSG DDDLSSEDNE DSVSDFDEEA DILIDGDFME ELIEGENEDD GNGEDEDDDD DGEMQDFMSS GEEDDYRDNI RSS
0101: HNSGKLCILI RENDEFFELI SSTFLSENSY STAVKAASAR LLMNCSLTWM YPHVFDDAVT ENFKNWVMEE AVKFPGEDSA KKEASDFEML KTYSTGLLAL
0201: SLASRGQIVE DVLTSGLSAK LMHYLRVRVL KEPSTSRIHT TETKHVSLKT KEEGRSRVRK IVDTVEGDHV LETDSGREMG QTDVQPDGEF EIDGRDVFNV
0301: SGVVDCKIKP GDDNSVRDDP SRHRLNRSKS RGRGRVHEGA PDTEVLLASP RLGRLLVRDR DLSKISDGRN AEDVTVCLGK MKSGIMEIER EDNDECFQGC
0401: IIGTKNITDL VKRAVGAAET EARAAHAPDD AAKAAGDAAA ELVKTAALEE FKSSGSEEAA VSAATRAAIT VIDAAEVSRN PTCVTSDQTT DVSEVSLPDI
0501: ESLAQLQEKY CIQCLEILGE YVEVLGPVLH EKGVDVCIVL LERTSQLDDR STVSPLLPDV MKLICALAAH RKFAAMFVER RGILKLLAVP RVSETFYGLS
0601: SCLYTIGSLQ GIMERVCALP LVVIHQVVKL AIELLDCSQD QARKNSALFF AAAFVFRAIL DAFDAQDSLQ KLLAILKDAA SVRTGANTDR SAPEVMTSSE
0701: KQMAFHTCFA LRQYFRAHLL LLVDSIRPSR ISRGGVPSSM KPNIRAAYKP LDISNEAVDA IFLQLQKDRR LGPTFVKAQW PAVNNFLASS GHVTMLELCQ
0801: TPPVDRYLHD LLQYAFGVLH IVTSIPDGRK AIAHATLSNN RAGIAVILDA ANISNSIVDP EIIQPALNVL INLVCPPPSL SNKPPLAQNH QPVPGQATTR
0901: PSTDVAVGTQ STGNAPQTPV APASSGLVGD RRIFLGAGTG SAGLAAKLEQ VYRQAREAVR GNDGIKILLK LLQPRIYVNP PATPDCLRAL ACRVLLGLAR
1001: DDTIAQILTK LEVGKSLSEL IRDSGGQSSG TDQGRWQAEL AQVALELIGI VTNSGHATTL TASDAATPTL RRIERAAIAA ATPITYDSKE LLLLIHEHLQ
1101: ASGLGDTASA LLKEAQLTPL PSSASPSSIA YSTTQEMSTP LAQEQWPSGR ANSGFFTSKP KVCAHDEDPN SRSNAALSAK KKHLASSTLE MPTPVAQQQW
1201: PSGRANCGFC PSIPKINARD EDPSSRGNAA PSAKKKQLTF SPSFSSQSRK QSFSHDALPQ STQRINCCSN SDPALADTSE TAAELVLKND LDADAQFKTP
1301: ISFPRKRKLS ELRDSSVPGK RIDLGERRNS TFADGSGLQT PASALDANQS GSSRLGQMTP ASQLRLPSDP QPSNPERLSL DSLVVQYLKH QHRQCLAPIT
1401: TLPPVSLLHP HVCPEPKRLL EAPLNMTGRL GTRELQSFYS GVHGNRRDRQ FVFSRFKSWR SFRDETALFT CIALLGGTNH IAVGSHAGEI KIFEASSGSM
1501: LESVSGHQAP VTLVQPYVSR DTQLLLSSSS SDVQLWDASS ITGGPRHSFD GCKAAKFSNS GLQFAALSCE ASRKDVLLYD VQTCSPCQKL TDTVTSSRSN
1601: PYSLVHFSPC DTLILWNGVL WDRRIPEKVR RFDQFTDYGG GGFHPSRNEV IINSEIWDMR TFKLLRSVPS LDQTAITFNS RGDVIYAMLR RNIEDVMSAV
1701: HTRRVKHPLF AAFRTLDAIN YSDIATIPVD RCLLDFATEP TDSFLGLITM EDQEDMFSSA RMYEIGRRRP TDDDSDPDDD DETEDEDEDD EEEDDLDRIL
1801: GLAGDNSDSG DDDLSSEDNE DSVSDFDEEA DILIDGDFME ELIEGENEDD GNGEDEDDDD DGEMQDFMSS GEEDDYRDNI RSS
Arabidopsis Description
DCAF1DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M086]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.