Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH61892 | Soybean | cytosol | 93.76 | 92.89 |
| VIT_04s0008g03060.t01 | Wine grape | cytosol, nucleus, plasma membrane | 72.75 | 71.12 |
| Solyc08g074370.2.1 | Tomato | nucleus | 64.85 | 66.29 |
| KRH16085 | Soybean | cytosol | 23.3 | 62.57 |
| GSMUA_Achr7P23160_001 | Banana | plasma membrane, plastid, vacuole | 54.29 | 60.98 |
| GSMUA_Achr3P22370_001 | Banana | cytosol | 52.31 | 60.53 |
| CDX72295 | Canola | cytosol, nucleus, plastid | 55.07 | 60.41 |
| CDY23283 | Canola | nucleus | 57.67 | 60.08 |
| CDY13413 | Canola | nucleus | 54.55 | 60.01 |
| CDY36454 | Canola | nucleus | 57.31 | 59.92 |
| AT4G31160.1 | Thale cress | cytosol, nucleus, plasma membrane | 57.72 | 58.95 |
| Bra024021.1-P | Field mustard | nucleus | 54.71 | 58.44 |
| Bra010248.1-P | Field mustard | nucleus | 57.77 | 58.32 |
| TraesCS2B01G630100.1 | Wheat | nucleus | 45.29 | 57.3 |
| Os04t0691200-00 | Rice | cytosol | 17.89 | 54.34 |
| HORVU2Hr1G126010.3 | Barley | cytosol | 51.12 | 53.16 |
| EES13157 | Sorghum | cytosol | 52.31 | 52.51 |
| TraesCS2A01G566600.1 | Wheat | nucleus | 51.79 | 52.37 |
| TraesCS2D01G576800.1 | Wheat | cytosol | 51.59 | 52.16 |
| Zm00001d026691_P004 | Maize | cytosol | 51.9 | 52.11 |
| Zm00001d002933_P014 | Maize | cytosol | 50.55 | 51.1 |
| VIT_15s0021g02350.t01 | Wine grape | nucleus | 7.33 | 40.99 |
| CDY03208 | Canola | nucleus | 3.95 | 39.18 |
Protein Annotations
| EntrezGene:100800133 | Gene3D:2.130.10.10 | MapMan:35.1 | EMBL:ACUP02003423 | InterPro:ARM-type_fold | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_06G075000 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0019538 | InterPro:IPR001680 | InterPro:IPR006594 |
| InterPro:IPR015943 | InterPro:IPR017986 | UniProt:K7KTN3 | EnsemblPlants:KRH52554 | ProteinID:KRH52554 | ProteinID:KRH52554.1 |
| InterPro:LisH | PFscan:PS50294 | PFscan:PS50896 | PANTHER:PTHR13129 | SMART:SM00320 | SMART:SM00667 |
| SUPFAM:SSF48371 | SUPFAM:SSF50978 | UniParc:UPI00029659EF | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom |
| InterPro:WD40_repeat_dom_sf | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:5796960..5805987
Molecular Weight (calculated)
210054.0 Da
IEP (calculated)
4.971
GRAVY (calculated)
-0.368
Length
1923 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSLMMEDQAN QAPPPQDEEE DSKKEEEELI AKVNKLMEKI TSAPDNPNAT VLHALASILE AQESRYMEEN GHSSSSTARA AHIIGRLGGL IRENDEFFEL
0101: ISSKFLLETR YSTSIQAASG RLLLCCSLTW IYPHVFEESV MENIKNWVMD DNTGLPAEEQ NLRHNPGRSE AASDSEMLKT YSTGLLAVCL DGQGQIVEDV
0201: LTSGLSAKLM RYLRISVLGE TSGNQKDVTH ITESRHASTN TSARGRDDGR GRFRQLLESN HLDDTKMIDE RSLDDVTLER VDGEPPDGLG EGTDVHKVDS
0301: DGEDTWRCRD IRDGRIKYGE HDDNIRDDSS RRRANRGWGR SRGKGRVNEG AVESDPILSS PGSGSRLGQG RSVRDRSILR NADVRRGADS KKTLGRIPSE
0401: ASAFEREDDD DCFEECRIGS KDITDLVRKA VRSAEAEARS ANAPEEAVKA AGDAAADLVK TAASEEYKSS NDEEAAFLAA SRATSTVIDA ASAVEVSRSS
0501: ICDNTVTENV SGKETETNED VEEYFIPDTK SLAQLREKYC IQCLELLGEY VEVLGPVLHE KGVDVCLGLL QKNSKHWEAS KVALLLPDVM KLICALAAHR
0601: KFAALFVDRG GMQKLLDVPR MPQTFFGLSS CLFTIGSLQG IMERVCALPS KVVNEVVELA LQLLDCNQDQ ARKNAALFFA AAFVFRAVLD AFDSLDGLQK
0701: LLGLLNDAAS VRSGVNSGAL NLSNSGSLRN DRSSAEVLTS SEKQIAYHTC VALRQYFRAH LLVLVDSIRP NKSNRSAARN IPSVRAVYKP LDISNEAMDA
0801: VFLQLQKDRK LGPAFVRTRW LAVEKFLASN GHITMLELCQ APPVERYLHD LLQYALGVLH IVTLVPSSRK MIVNVTLSNN RVGIAVILDA ANIASNHVDP
0901: EIIQPALNVL VNLVCPPPSI SNKPAMVAQG QQLASSQTSN GPPSEARDRN AERNVSDRAV HSTSQIDPRE RNGESNAVDR GSASGLSTQP VNSLPQTPVA
1001: SAASGLVGDR RISLGAGAGC AGLAAQLEQG YRQAREVVRS NNGIKVLLHL LQPRIYSPPA ALDCLRALAC RVLLGLARDD TIAHILTKLQ VGKKLSELIR
1101: DSGSQTLGTE QGRWQAELSQ AAIELIGIVT NSGRASTLAA TDAATPTLRR IERAAIAAAT PITYHSRELL LLIHEHLQAS GLAQTASMLL KEAQLTPLPS
1201: LVPPSSLAQQ PITQEASSTQ IQWPSGRALS GFLTHKLRFN AKDDDAGLKS DSVSAKKKSL TFSSSFHSRF QHLDSQSSVK KLSDTGKESS ETTVVETTFG
1301: SSVKHNIDTG SQFKTPITLP AKRKLSDLKD ISMFSSSGKR LNVGDQGFRS PICSSVIRKS CLQSDAVGLF SPTCNLKQSR CMGDLVDENH SISNLVQMTP
1401: SSQVLNDLQP NNAERVTLDS LVVQYLKHQH RQCPAPITTL PPLSLLHPHV CPEPKRSLDA PSNVTARLGT REFKYMYGGV HGNRRDRQFV YSRFRPWRTC
1501: RDDAGALLTC ITFVGDSSHI AVGSHNGELK FFDSNNSNVV ESYTGHQSPL TLVQSFVSGE TQLLLSSSSQ DVRLWDATSI LGGPSHSFEG CKAARFSNSG
1601: NVFAALSSES ARREILLYDI QTCHIESKLS DTFAASTGRG HVYSLIHFNP SDSMLLWNGV LWDRRVSGPV HRFDQFTDYG GGGFHPAGNE VIINSEVWDL
1701: RKFRLLRSVP SLDQTSITFN ARGDVMYAIL RRNLEDVMSA VHTRRVKHPL FAAFRTVDAI NYSDIATIPV DRCVLDFAAE PTDSFVGLIT MDDQDEMYAS
1801: ARIYEIGRRR PTDDDSDPDD AESEEEDEDD DDDDPDVDPL LGPGLGGDSC SDADDMSNDD DDDSVSDLDE DGDFILDDVD FDGGPGILEI VTEGDEDDDD
1901: DSQLLESLSS SDDEDFVGNG FGY
0101: ISSKFLLETR YSTSIQAASG RLLLCCSLTW IYPHVFEESV MENIKNWVMD DNTGLPAEEQ NLRHNPGRSE AASDSEMLKT YSTGLLAVCL DGQGQIVEDV
0201: LTSGLSAKLM RYLRISVLGE TSGNQKDVTH ITESRHASTN TSARGRDDGR GRFRQLLESN HLDDTKMIDE RSLDDVTLER VDGEPPDGLG EGTDVHKVDS
0301: DGEDTWRCRD IRDGRIKYGE HDDNIRDDSS RRRANRGWGR SRGKGRVNEG AVESDPILSS PGSGSRLGQG RSVRDRSILR NADVRRGADS KKTLGRIPSE
0401: ASAFEREDDD DCFEECRIGS KDITDLVRKA VRSAEAEARS ANAPEEAVKA AGDAAADLVK TAASEEYKSS NDEEAAFLAA SRATSTVIDA ASAVEVSRSS
0501: ICDNTVTENV SGKETETNED VEEYFIPDTK SLAQLREKYC IQCLELLGEY VEVLGPVLHE KGVDVCLGLL QKNSKHWEAS KVALLLPDVM KLICALAAHR
0601: KFAALFVDRG GMQKLLDVPR MPQTFFGLSS CLFTIGSLQG IMERVCALPS KVVNEVVELA LQLLDCNQDQ ARKNAALFFA AAFVFRAVLD AFDSLDGLQK
0701: LLGLLNDAAS VRSGVNSGAL NLSNSGSLRN DRSSAEVLTS SEKQIAYHTC VALRQYFRAH LLVLVDSIRP NKSNRSAARN IPSVRAVYKP LDISNEAMDA
0801: VFLQLQKDRK LGPAFVRTRW LAVEKFLASN GHITMLELCQ APPVERYLHD LLQYALGVLH IVTLVPSSRK MIVNVTLSNN RVGIAVILDA ANIASNHVDP
0901: EIIQPALNVL VNLVCPPPSI SNKPAMVAQG QQLASSQTSN GPPSEARDRN AERNVSDRAV HSTSQIDPRE RNGESNAVDR GSASGLSTQP VNSLPQTPVA
1001: SAASGLVGDR RISLGAGAGC AGLAAQLEQG YRQAREVVRS NNGIKVLLHL LQPRIYSPPA ALDCLRALAC RVLLGLARDD TIAHILTKLQ VGKKLSELIR
1101: DSGSQTLGTE QGRWQAELSQ AAIELIGIVT NSGRASTLAA TDAATPTLRR IERAAIAAAT PITYHSRELL LLIHEHLQAS GLAQTASMLL KEAQLTPLPS
1201: LVPPSSLAQQ PITQEASSTQ IQWPSGRALS GFLTHKLRFN AKDDDAGLKS DSVSAKKKSL TFSSSFHSRF QHLDSQSSVK KLSDTGKESS ETTVVETTFG
1301: SSVKHNIDTG SQFKTPITLP AKRKLSDLKD ISMFSSSGKR LNVGDQGFRS PICSSVIRKS CLQSDAVGLF SPTCNLKQSR CMGDLVDENH SISNLVQMTP
1401: SSQVLNDLQP NNAERVTLDS LVVQYLKHQH RQCPAPITTL PPLSLLHPHV CPEPKRSLDA PSNVTARLGT REFKYMYGGV HGNRRDRQFV YSRFRPWRTC
1501: RDDAGALLTC ITFVGDSSHI AVGSHNGELK FFDSNNSNVV ESYTGHQSPL TLVQSFVSGE TQLLLSSSSQ DVRLWDATSI LGGPSHSFEG CKAARFSNSG
1601: NVFAALSSES ARREILLYDI QTCHIESKLS DTFAASTGRG HVYSLIHFNP SDSMLLWNGV LWDRRVSGPV HRFDQFTDYG GGGFHPAGNE VIINSEVWDL
1701: RKFRLLRSVP SLDQTSITFN ARGDVMYAIL RRNLEDVMSA VHTRRVKHPL FAAFRTVDAI NYSDIATIPV DRCVLDFAAE PTDSFVGLIT MDDQDEMYAS
1801: ARIYEIGRRR PTDDDSDPDD AESEEEDEDD DDDDPDVDPL LGPGLGGDSC SDADDMSNDD DDDSVSDLDE DGDFILDDVD FDGGPGILEI VTEGDEDDDD
1901: DSQLLESLSS SDDEDFVGNG FGY
0001: MDGQEHAEVP NSMVEDDQSV VAAEAIAELA NSTGEPNPEE GEEQSVEDEL IAKAQKLMED ITSVANNPNP NILHALSQLL ESQESLFLEE NGHFSNARGS
0101: HNSGKLCILI RENDEFFELI SSTFLSENSY STAVKAASAR LLMNCSLTWM YPHVFDDAVT ENFKNWVMEE AVKFPGEDSA KKEASDFEML KTYSTGLLAL
0201: SLASRGQIVE DVLTSGLSAK LMHYLRVRVL KEPSTSRIHT TETKHVSLKT KEEGRSRVRK IVDTVEGDHV LETDSGREMG QTDVQPDGEF EIDGRDVFNV
0301: SGVVDCKIKP GDDNSVRDDP SRHRLNRSKS RGRGRVHEGA PDTEVLLASP RLGRLLVRDR DLSKISDGRN AEDVTVCLGK MKSGIMEIER EDNDECFQGC
0401: IIGTKNITDL VKRAVGAAET EARAAHAPDD AAKAAGDAAA ELVKTAALEE FKSSGSEEAA VSAATRAAIT VIDAAEVSRN PTCVTSDQTT DVSEVSLPDI
0501: ESLAQLQEKY CIQCLEILGE YVEVLGPVLH EKGVDVCIVL LERTSQLDDR STVSPLLPDV MKLICALAAH RKFAAMFVER RGILKLLAVP RVSETFYGLS
0601: SCLYTIGSLQ GIMERVCALP LVVIHQVVKL AIELLDCSQD QARKNSALFF AAAFVFRAIL DAFDAQDSLQ KLLAILKDAA SVRTGANTDR SAPEVMTSSE
0701: KQMAFHTCFA LRQYFRAHLL LLVDSIRPSR ISRGGVPSSM KPNIRAAYKP LDISNEAVDA IFLQLQKDRR LGPTFVKAQW PAVNNFLASS GHVTMLELCQ
0801: TPPVDRYLHD LLQYAFGVLH IVTSIPDGRK AIAHATLSNN RAGIAVILDA ANISNSIVDP EIIQPALNVL INLVCPPPSL SNKPPLAQNH QPVPGQATTR
0901: PSTDVAVGTQ STGNAPQTPV APASSGLVGD RRIFLGAGTG SAGLAAKLEQ VYRQAREAVR GNDGIKILLK LLQPRIYVNP PATPDCLRAL ACRVLLGLAR
1001: DDTIAQILTK LEVGKSLSEL IRDSGGQSSG TDQGRWQAEL AQVALELIGI VTNSGHATTL TASDAATPTL RRIERAAIAA ATPITYDSKE LLLLIHEHLQ
1101: ASGLGDTASA LLKEAQLTPL PSSASPSSIA YSTTQEMSTP LAQEQWPSGR ANSGFFTSKP KVCAHDEDPN SRSNAALSAK KKHLASSTLE MPTPVAQQQW
1201: PSGRANCGFC PSIPKINARD EDPSSRGNAA PSAKKKQLTF SPSFSSQSRK QSFSHDALPQ STQRINCCSN SDPALADTSE TAAELVLKND LDADAQFKTP
1301: ISFPRKRKLS ELRDSSVPGK RIDLGERRNS TFADGSGLQT PASALDANQS GSSRLGQMTP ASQLRLPSDP QPSNPERLSL DSLVVQYLKH QHRQCLAPIT
1401: TLPPVSLLHP HVCPEPKRLL EAPLNMTGRL GTRELQSFYS GVHGNRRDRQ FVFSRFKSWR SFRDETALFT CIALLGGTNH IAVGSHAGEI KIFEASSGSM
1501: LESVSGHQAP VTLVQPYVSR DTQLLLSSSS SDVQLWDASS ITGGPRHSFD GCKAAKFSNS GLQFAALSCE ASRKDVLLYD VQTCSPCQKL TDTVTSSRSN
1601: PYSLVHFSPC DTLILWNGVL WDRRIPEKVR RFDQFTDYGG GGFHPSRNEV IINSEIWDMR TFKLLRSVPS LDQTAITFNS RGDVIYAMLR RNIEDVMSAV
1701: HTRRVKHPLF AAFRTLDAIN YSDIATIPVD RCLLDFATEP TDSFLGLITM EDQEDMFSSA RMYEIGRRRP TDDDSDPDDD DETEDEDEDD EEEDDLDRIL
1801: GLAGDNSDSG DDDLSSEDNE DSVSDFDEEA DILIDGDFME ELIEGENEDD GNGEDEDDDD DGEMQDFMSS GEEDDYRDNI RSS
0101: HNSGKLCILI RENDEFFELI SSTFLSENSY STAVKAASAR LLMNCSLTWM YPHVFDDAVT ENFKNWVMEE AVKFPGEDSA KKEASDFEML KTYSTGLLAL
0201: SLASRGQIVE DVLTSGLSAK LMHYLRVRVL KEPSTSRIHT TETKHVSLKT KEEGRSRVRK IVDTVEGDHV LETDSGREMG QTDVQPDGEF EIDGRDVFNV
0301: SGVVDCKIKP GDDNSVRDDP SRHRLNRSKS RGRGRVHEGA PDTEVLLASP RLGRLLVRDR DLSKISDGRN AEDVTVCLGK MKSGIMEIER EDNDECFQGC
0401: IIGTKNITDL VKRAVGAAET EARAAHAPDD AAKAAGDAAA ELVKTAALEE FKSSGSEEAA VSAATRAAIT VIDAAEVSRN PTCVTSDQTT DVSEVSLPDI
0501: ESLAQLQEKY CIQCLEILGE YVEVLGPVLH EKGVDVCIVL LERTSQLDDR STVSPLLPDV MKLICALAAH RKFAAMFVER RGILKLLAVP RVSETFYGLS
0601: SCLYTIGSLQ GIMERVCALP LVVIHQVVKL AIELLDCSQD QARKNSALFF AAAFVFRAIL DAFDAQDSLQ KLLAILKDAA SVRTGANTDR SAPEVMTSSE
0701: KQMAFHTCFA LRQYFRAHLL LLVDSIRPSR ISRGGVPSSM KPNIRAAYKP LDISNEAVDA IFLQLQKDRR LGPTFVKAQW PAVNNFLASS GHVTMLELCQ
0801: TPPVDRYLHD LLQYAFGVLH IVTSIPDGRK AIAHATLSNN RAGIAVILDA ANISNSIVDP EIIQPALNVL INLVCPPPSL SNKPPLAQNH QPVPGQATTR
0901: PSTDVAVGTQ STGNAPQTPV APASSGLVGD RRIFLGAGTG SAGLAAKLEQ VYRQAREAVR GNDGIKILLK LLQPRIYVNP PATPDCLRAL ACRVLLGLAR
1001: DDTIAQILTK LEVGKSLSEL IRDSGGQSSG TDQGRWQAEL AQVALELIGI VTNSGHATTL TASDAATPTL RRIERAAIAA ATPITYDSKE LLLLIHEHLQ
1101: ASGLGDTASA LLKEAQLTPL PSSASPSSIA YSTTQEMSTP LAQEQWPSGR ANSGFFTSKP KVCAHDEDPN SRSNAALSAK KKHLASSTLE MPTPVAQQQW
1201: PSGRANCGFC PSIPKINARD EDPSSRGNAA PSAKKKQLTF SPSFSSQSRK QSFSHDALPQ STQRINCCSN SDPALADTSE TAAELVLKND LDADAQFKTP
1301: ISFPRKRKLS ELRDSSVPGK RIDLGERRNS TFADGSGLQT PASALDANQS GSSRLGQMTP ASQLRLPSDP QPSNPERLSL DSLVVQYLKH QHRQCLAPIT
1401: TLPPVSLLHP HVCPEPKRLL EAPLNMTGRL GTRELQSFYS GVHGNRRDRQ FVFSRFKSWR SFRDETALFT CIALLGGTNH IAVGSHAGEI KIFEASSGSM
1501: LESVSGHQAP VTLVQPYVSR DTQLLLSSSS SDVQLWDASS ITGGPRHSFD GCKAAKFSNS GLQFAALSCE ASRKDVLLYD VQTCSPCQKL TDTVTSSRSN
1601: PYSLVHFSPC DTLILWNGVL WDRRIPEKVR RFDQFTDYGG GGFHPSRNEV IINSEIWDMR TFKLLRSVPS LDQTAITFNS RGDVIYAMLR RNIEDVMSAV
1701: HTRRVKHPLF AAFRTLDAIN YSDIATIPVD RCLLDFATEP TDSFLGLITM EDQEDMFSSA RMYEIGRRRP TDDDSDPDDD DETEDEDEDD EEEDDLDRIL
1801: GLAGDNSDSG DDDLSSEDNE DSVSDFDEEA DILIDGDFME ELIEGENEDD GNGEDEDDDD DGEMQDFMSS GEEDDYRDNI RSS
Arabidopsis Description
DCAF1DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M086]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.