Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d009745_P023 | |
| Zm00001d013116_P002 | |
| Zm00001d034361_P001 | |
| Zm00001d039165_P046 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES13157 | Sorghum | cytosol | 93.68 | 93.63 |
| Zm00001d002933_P014 | Maize | cytosol | 88.25 | 88.85 |
| Os04t0691200-00 | Rice | cytosol | 26.32 | 79.62 |
| TraesCS2B01G630100.1 | Wheat | nucleus | 60.52 | 76.25 |
| HORVU2Hr1G126010.3 | Barley | cytosol | 70.65 | 73.17 |
| TraesCS2D01G576800.1 | Wheat | cytosol | 70.91 | 71.4 |
| TraesCS2A01G566600.1 | Wheat | nucleus | 70.91 | 71.4 |
| GSMUA_Achr3P22370_001 | Banana | cytosol | 50.23 | 57.88 |
| GSMUA_Achr7P23160_001 | Banana | plasma membrane, plastid, vacuole | 50.39 | 56.37 |
| VIT_04s0008g03060.t01 | Wine grape | cytosol, nucleus, plasma membrane | 54.05 | 52.62 |
| Solyc08g074370.2.1 | Tomato | nucleus | 51.49 | 52.42 |
| KRH52554 | Soybean | nucleus | 52.11 | 51.9 |
| KRH61892 | Soybean | cytosol | 52.01 | 51.31 |
| CDY13413 | Canola | nucleus | 43.5 | 47.65 |
| CDX72295 | Canola | cytosol, nucleus, plastid | 43.5 | 47.52 |
| CDY36454 | Canola | nucleus | 45.38 | 47.25 |
| CDY23283 | Canola | nucleus | 45.17 | 46.86 |
| Bra024021.1-P | Field mustard | nucleus | 43.29 | 46.06 |
| AT4G31160.1 | Thale cress | cytosol, nucleus, plasma membrane | 44.7 | 45.46 |
| Bra010248.1-P | Field mustard | nucleus | 45.07 | 45.3 |
| KRH16085 | Soybean | cytosol | 16.66 | 44.55 |
| VIT_15s0021g02350.t01 | Wine grape | nucleus | 6.01 | 33.43 |
| CDY03208 | Canola | nucleus | 3.03 | 29.9 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:35.1 | UniProt:A0A1D6JIP7 | ProteinID:AQK47471.1 | InterPro:ARM-type_fold | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016567 | GO:GO:0019538 | InterPro:IPR001680 | InterPro:IPR006594 | InterPro:IPR015943 |
| InterPro:LisH | PFscan:PS50896 | PANTHER:PTHR13129 | SMART:SM00320 | SMART:SM00667 | SUPFAM:SSF48371 |
| SUPFAM:SSF50978 | UniParc:UPI0004DE7EAA | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom_sf | EnsemblPlantsGene:Zm00001d026691 |
| EnsemblPlants:Zm00001d026691_P004 | EnsemblPlants:Zm00001d026691_T004 | SEG:seg | : | : | : |
Description
DDB1- and CUL4-associated factor homolog 1
Coordinates
chr10:-:150051956..150061708
Molecular Weight (calculated)
208560.0 Da
IEP (calculated)
5.148
GRAVY (calculated)
-0.315
Length
1915 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAESEKGAAA TTTAAAEPGS GPPHEDEDAL LARAHTVISR ILDRELDPNP RLLHTLATMC ELHEARYLEL RAADPTFNNT NTRSTFTIGK LANLLRDNDE
0101: FYELVFCKFL SDTSYSVAVQ AAAARLLLSC HSAWTPPYPH VFEDSIIDNI KKWVMKDPEA SNECEWKYLG KNKPTDAEML RTYAIGLLAM ALCSGGQLVE
0201: DVLTLGVPAK LMHFLRIRVL GDASSSQRDA NHPQDTKYPR GRDDNRGKSR LAQDGSRLDG TRVGYGILTN PTAEKDNEPG VVMRQAYGER SLDGTFASSD
0301: NSDVPEVDWT NDNSYGTIVC DTKSKYGEKT SVTRALKDEE ISENGELLKR KLSRAPSRLR VKGKAGDNLP ECEMTPLSPT SGLRIGGRAS RDRNVVRVDD
0401: PKKATDVNNS SAGLELFSAI SKEEYEDRLR DCIIGLKDIS DIVLKAVRAA EAEARSANAP DEAVKAAGDA AAELVKSAAL EVWKAENNSD AVIVAAEKAA
0501: SAVVEAAVST SVSRSTNQVG EERAAEEAVQ TSEDQDLENF VISDKSQLLQ LREKYSIQCL QILGEYVEAL GPVLHEKGVD VCLTLLQMSM KDQEGCDHFA
0601: QLPDVLKLIC ALAAHRKFAA LFVDRGGIQK ILSIPRITQT YMGLSACLFT FGSLQSTMER VCALSSDTLD SVVELALQLL ECPQDLARKN VGIFFAAAFV
0701: FKAVLDLFDA RDGMQKLLDI LYGCASGRSG SNSGGAGSSN VNQGNDRSPA EALTASEKQV AYHTCVALRQ YFRAHLLQLV DSIRPSKSIR SIARNTSSAR
0801: AGYKPFDISN EAMDAVFRQI QRDRKLGLAL VRVRWPVLDK FFASNGHVTM LELCKFQAHG DRYLRDLTQY AIGVLHIITL MPQPHVRKSI VQGTLSNNRA
0901: GMAVLLDTVK SFDYIDHEVI CPALNVLVNL VCPPPSISNK PLSTANQQPA AAQALASESR DRNFEKSISD RNLLANQGEY RERSGDGNPA ERNNTLHQGT
1001: PNTPVVTSGV VGDRRITLGV GGGGPGLAAQ LEQGYRQARE VVRANNGIKI LLQLLGSRMV THPVAIDSIR ALACRVLLGL ARDDTIAHIL TKLQVGKKLS
1101: ELIRDTSAQT SAGDSGRWQA ELTQVAIELI AVLTNSGKET TLAATDAAAP ALRRIERAGI AAATPISYHS RELMQLIHEH LLGSGFTATA AMLQKEAGLA
1201: PLPLIAAVLP AHQVAALEAS SVQQQWPSGR VQGFLSDKIN MSTDQSAHRS DSIPPSSKKK ALTFSSSFSR RAQTPHSVSG SRTSNILKSP VPIAADTRDA
1301: EMLNKTPLSL PLKRKLVDVK DNNSVSATKR LATTDQTYQP SVFQTPAPTR KGLSVAVDSP TSFHCGRTNF NYVSTENLDN SQSTPGTLIT TTLPGVNDQQ
1401: SGNLERMTLD SLVVQYLKHQ HRQCPAPVTT LPPLSLLHPH VCPEPSRSLS APANIAARMG SREIRRQFSG IQIPRRDRHF IYSRFKQCRV CRDEASLLTC
1501: MTFLGDASRV VAGNHTGELR IFDCNTANLL ETQTCHLHLV TTMEATCSGG HELILTSSLN EVKIWDAFSV SAGPLHTFEA CKAARFNHSG TSFAALSTDT
1601: AQREVQLYDV QTYTLATQLP DNTSSSGSGR GYIQPIIHFS PSDTMLLWNG VLWDTRQPNF VHQFDQFTDY CGGGFHPAGN EVILNSEVWD LRKFKLLRSV
1701: PSLDQTVIKF NGTGDVIYAI LRRNLDDVTS SINARRVRHP LFPAFRTIDA VTYSDIATVQ IDRCVLDLAT EPNDSLIGVV AMDDHQELFS SARLFEVGRK
1801: RITDDDSDPE DAGETDDDDD DDGDSDDDVL LAPVLEGDTD SEEISSSSDD GDEDGGDDDI PSSDDIEDDP EYIDGGGDFE GGGGLMDILG DDEGEGDESD
1901: MMESFSSGDE EGWIM
0101: FYELVFCKFL SDTSYSVAVQ AAAARLLLSC HSAWTPPYPH VFEDSIIDNI KKWVMKDPEA SNECEWKYLG KNKPTDAEML RTYAIGLLAM ALCSGGQLVE
0201: DVLTLGVPAK LMHFLRIRVL GDASSSQRDA NHPQDTKYPR GRDDNRGKSR LAQDGSRLDG TRVGYGILTN PTAEKDNEPG VVMRQAYGER SLDGTFASSD
0301: NSDVPEVDWT NDNSYGTIVC DTKSKYGEKT SVTRALKDEE ISENGELLKR KLSRAPSRLR VKGKAGDNLP ECEMTPLSPT SGLRIGGRAS RDRNVVRVDD
0401: PKKATDVNNS SAGLELFSAI SKEEYEDRLR DCIIGLKDIS DIVLKAVRAA EAEARSANAP DEAVKAAGDA AAELVKSAAL EVWKAENNSD AVIVAAEKAA
0501: SAVVEAAVST SVSRSTNQVG EERAAEEAVQ TSEDQDLENF VISDKSQLLQ LREKYSIQCL QILGEYVEAL GPVLHEKGVD VCLTLLQMSM KDQEGCDHFA
0601: QLPDVLKLIC ALAAHRKFAA LFVDRGGIQK ILSIPRITQT YMGLSACLFT FGSLQSTMER VCALSSDTLD SVVELALQLL ECPQDLARKN VGIFFAAAFV
0701: FKAVLDLFDA RDGMQKLLDI LYGCASGRSG SNSGGAGSSN VNQGNDRSPA EALTASEKQV AYHTCVALRQ YFRAHLLQLV DSIRPSKSIR SIARNTSSAR
0801: AGYKPFDISN EAMDAVFRQI QRDRKLGLAL VRVRWPVLDK FFASNGHVTM LELCKFQAHG DRYLRDLTQY AIGVLHIITL MPQPHVRKSI VQGTLSNNRA
0901: GMAVLLDTVK SFDYIDHEVI CPALNVLVNL VCPPPSISNK PLSTANQQPA AAQALASESR DRNFEKSISD RNLLANQGEY RERSGDGNPA ERNNTLHQGT
1001: PNTPVVTSGV VGDRRITLGV GGGGPGLAAQ LEQGYRQARE VVRANNGIKI LLQLLGSRMV THPVAIDSIR ALACRVLLGL ARDDTIAHIL TKLQVGKKLS
1101: ELIRDTSAQT SAGDSGRWQA ELTQVAIELI AVLTNSGKET TLAATDAAAP ALRRIERAGI AAATPISYHS RELMQLIHEH LLGSGFTATA AMLQKEAGLA
1201: PLPLIAAVLP AHQVAALEAS SVQQQWPSGR VQGFLSDKIN MSTDQSAHRS DSIPPSSKKK ALTFSSSFSR RAQTPHSVSG SRTSNILKSP VPIAADTRDA
1301: EMLNKTPLSL PLKRKLVDVK DNNSVSATKR LATTDQTYQP SVFQTPAPTR KGLSVAVDSP TSFHCGRTNF NYVSTENLDN SQSTPGTLIT TTLPGVNDQQ
1401: SGNLERMTLD SLVVQYLKHQ HRQCPAPVTT LPPLSLLHPH VCPEPSRSLS APANIAARMG SREIRRQFSG IQIPRRDRHF IYSRFKQCRV CRDEASLLTC
1501: MTFLGDASRV VAGNHTGELR IFDCNTANLL ETQTCHLHLV TTMEATCSGG HELILTSSLN EVKIWDAFSV SAGPLHTFEA CKAARFNHSG TSFAALSTDT
1601: AQREVQLYDV QTYTLATQLP DNTSSSGSGR GYIQPIIHFS PSDTMLLWNG VLWDTRQPNF VHQFDQFTDY CGGGFHPAGN EVILNSEVWD LRKFKLLRSV
1701: PSLDQTVIKF NGTGDVIYAI LRRNLDDVTS SINARRVRHP LFPAFRTIDA VTYSDIATVQ IDRCVLDLAT EPNDSLIGVV AMDDHQELFS SARLFEVGRK
1801: RITDDDSDPE DAGETDDDDD DDGDSDDDVL LAPVLEGDTD SEEISSSSDD GDEDGGDDDI PSSDDIEDDP EYIDGGGDFE GGGGLMDILG DDEGEGDESD
1901: MMESFSSGDE EGWIM
0001: MDGQEHAEVP NSMVEDDQSV VAAEAIAELA NSTGEPNPEE GEEQSVEDEL IAKAQKLMED ITSVANNPNP NILHALSQLL ESQESLFLEE NGHFSNARGS
0101: HNSGKLCILI RENDEFFELI SSTFLSENSY STAVKAASAR LLMNCSLTWM YPHVFDDAVT ENFKNWVMEE AVKFPGEDSA KKEASDFEML KTYSTGLLAL
0201: SLASRGQIVE DVLTSGLSAK LMHYLRVRVL KEPSTSRIHT TETKHVSLKT KEEGRSRVRK IVDTVEGDHV LETDSGREMG QTDVQPDGEF EIDGRDVFNV
0301: SGVVDCKIKP GDDNSVRDDP SRHRLNRSKS RGRGRVHEGA PDTEVLLASP RLGRLLVRDR DLSKISDGRN AEDVTVCLGK MKSGIMEIER EDNDECFQGC
0401: IIGTKNITDL VKRAVGAAET EARAAHAPDD AAKAAGDAAA ELVKTAALEE FKSSGSEEAA VSAATRAAIT VIDAAEVSRN PTCVTSDQTT DVSEVSLPDI
0501: ESLAQLQEKY CIQCLEILGE YVEVLGPVLH EKGVDVCIVL LERTSQLDDR STVSPLLPDV MKLICALAAH RKFAAMFVER RGILKLLAVP RVSETFYGLS
0601: SCLYTIGSLQ GIMERVCALP LVVIHQVVKL AIELLDCSQD QARKNSALFF AAAFVFRAIL DAFDAQDSLQ KLLAILKDAA SVRTGANTDR SAPEVMTSSE
0701: KQMAFHTCFA LRQYFRAHLL LLVDSIRPSR ISRGGVPSSM KPNIRAAYKP LDISNEAVDA IFLQLQKDRR LGPTFVKAQW PAVNNFLASS GHVTMLELCQ
0801: TPPVDRYLHD LLQYAFGVLH IVTSIPDGRK AIAHATLSNN RAGIAVILDA ANISNSIVDP EIIQPALNVL INLVCPPPSL SNKPPLAQNH QPVPGQATTR
0901: PSTDVAVGTQ STGNAPQTPV APASSGLVGD RRIFLGAGTG SAGLAAKLEQ VYRQAREAVR GNDGIKILLK LLQPRIYVNP PATPDCLRAL ACRVLLGLAR
1001: DDTIAQILTK LEVGKSLSEL IRDSGGQSSG TDQGRWQAEL AQVALELIGI VTNSGHATTL TASDAATPTL RRIERAAIAA ATPITYDSKE LLLLIHEHLQ
1101: ASGLGDTASA LLKEAQLTPL PSSASPSSIA YSTTQEMSTP LAQEQWPSGR ANSGFFTSKP KVCAHDEDPN SRSNAALSAK KKHLASSTLE MPTPVAQQQW
1201: PSGRANCGFC PSIPKINARD EDPSSRGNAA PSAKKKQLTF SPSFSSQSRK QSFSHDALPQ STQRINCCSN SDPALADTSE TAAELVLKND LDADAQFKTP
1301: ISFPRKRKLS ELRDSSVPGK RIDLGERRNS TFADGSGLQT PASALDANQS GSSRLGQMTP ASQLRLPSDP QPSNPERLSL DSLVVQYLKH QHRQCLAPIT
1401: TLPPVSLLHP HVCPEPKRLL EAPLNMTGRL GTRELQSFYS GVHGNRRDRQ FVFSRFKSWR SFRDETALFT CIALLGGTNH IAVGSHAGEI KIFEASSGSM
1501: LESVSGHQAP VTLVQPYVSR DTQLLLSSSS SDVQLWDASS ITGGPRHSFD GCKAAKFSNS GLQFAALSCE ASRKDVLLYD VQTCSPCQKL TDTVTSSRSN
1601: PYSLVHFSPC DTLILWNGVL WDRRIPEKVR RFDQFTDYGG GGFHPSRNEV IINSEIWDMR TFKLLRSVPS LDQTAITFNS RGDVIYAMLR RNIEDVMSAV
1701: HTRRVKHPLF AAFRTLDAIN YSDIATIPVD RCLLDFATEP TDSFLGLITM EDQEDMFSSA RMYEIGRRRP TDDDSDPDDD DETEDEDEDD EEEDDLDRIL
1801: GLAGDNSDSG DDDLSSEDNE DSVSDFDEEA DILIDGDFME ELIEGENEDD GNGEDEDDDD DGEMQDFMSS GEEDDYRDNI RSS
0101: HNSGKLCILI RENDEFFELI SSTFLSENSY STAVKAASAR LLMNCSLTWM YPHVFDDAVT ENFKNWVMEE AVKFPGEDSA KKEASDFEML KTYSTGLLAL
0201: SLASRGQIVE DVLTSGLSAK LMHYLRVRVL KEPSTSRIHT TETKHVSLKT KEEGRSRVRK IVDTVEGDHV LETDSGREMG QTDVQPDGEF EIDGRDVFNV
0301: SGVVDCKIKP GDDNSVRDDP SRHRLNRSKS RGRGRVHEGA PDTEVLLASP RLGRLLVRDR DLSKISDGRN AEDVTVCLGK MKSGIMEIER EDNDECFQGC
0401: IIGTKNITDL VKRAVGAAET EARAAHAPDD AAKAAGDAAA ELVKTAALEE FKSSGSEEAA VSAATRAAIT VIDAAEVSRN PTCVTSDQTT DVSEVSLPDI
0501: ESLAQLQEKY CIQCLEILGE YVEVLGPVLH EKGVDVCIVL LERTSQLDDR STVSPLLPDV MKLICALAAH RKFAAMFVER RGILKLLAVP RVSETFYGLS
0601: SCLYTIGSLQ GIMERVCALP LVVIHQVVKL AIELLDCSQD QARKNSALFF AAAFVFRAIL DAFDAQDSLQ KLLAILKDAA SVRTGANTDR SAPEVMTSSE
0701: KQMAFHTCFA LRQYFRAHLL LLVDSIRPSR ISRGGVPSSM KPNIRAAYKP LDISNEAVDA IFLQLQKDRR LGPTFVKAQW PAVNNFLASS GHVTMLELCQ
0801: TPPVDRYLHD LLQYAFGVLH IVTSIPDGRK AIAHATLSNN RAGIAVILDA ANISNSIVDP EIIQPALNVL INLVCPPPSL SNKPPLAQNH QPVPGQATTR
0901: PSTDVAVGTQ STGNAPQTPV APASSGLVGD RRIFLGAGTG SAGLAAKLEQ VYRQAREAVR GNDGIKILLK LLQPRIYVNP PATPDCLRAL ACRVLLGLAR
1001: DDTIAQILTK LEVGKSLSEL IRDSGGQSSG TDQGRWQAEL AQVALELIGI VTNSGHATTL TASDAATPTL RRIERAAIAA ATPITYDSKE LLLLIHEHLQ
1101: ASGLGDTASA LLKEAQLTPL PSSASPSSIA YSTTQEMSTP LAQEQWPSGR ANSGFFTSKP KVCAHDEDPN SRSNAALSAK KKHLASSTLE MPTPVAQQQW
1201: PSGRANCGFC PSIPKINARD EDPSSRGNAA PSAKKKQLTF SPSFSSQSRK QSFSHDALPQ STQRINCCSN SDPALADTSE TAAELVLKND LDADAQFKTP
1301: ISFPRKRKLS ELRDSSVPGK RIDLGERRNS TFADGSGLQT PASALDANQS GSSRLGQMTP ASQLRLPSDP QPSNPERLSL DSLVVQYLKH QHRQCLAPIT
1401: TLPPVSLLHP HVCPEPKRLL EAPLNMTGRL GTRELQSFYS GVHGNRRDRQ FVFSRFKSWR SFRDETALFT CIALLGGTNH IAVGSHAGEI KIFEASSGSM
1501: LESVSGHQAP VTLVQPYVSR DTQLLLSSSS SDVQLWDASS ITGGPRHSFD GCKAAKFSNS GLQFAALSCE ASRKDVLLYD VQTCSPCQKL TDTVTSSRSN
1601: PYSLVHFSPC DTLILWNGVL WDRRIPEKVR RFDQFTDYGG GGFHPSRNEV IINSEIWDMR TFKLLRSVPS LDQTAITFNS RGDVIYAMLR RNIEDVMSAV
1701: HTRRVKHPLF AAFRTLDAIN YSDIATIPVD RCLLDFATEP TDSFLGLITM EDQEDMFSSA RMYEIGRRRP TDDDSDPDDD DETEDEDEDD EEEDDLDRIL
1801: GLAGDNSDSG DDDLSSEDNE DSVSDFDEEA DILIDGDFME ELIEGENEDD GNGEDEDDDD DGEMQDFMSS GEEDDYRDNI RSS
Arabidopsis Description
DCAF1DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M086]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.