Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra017569.1-P | |
| Bra022023.1-P | |
| Bra025031.1-P | |
| Bra029577.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G31160.1 | Bra029577.1-P | AT4G05420.1 | 18552200 |
| AT4G31160.1 | Bra017569.1-P | AT5G46210.1 | 18552200 |
| AT4G31160.1 | Bra022023.1-P | AT5G46210.1 | 18552200 |
| AT4G31160.1 | Bra025031.1-P | AT5G46210.1 | 18552200 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY23283 | Canola | nucleus | 95.64 | 98.7 |
| Bra024021.1-P | Field mustard | nucleus | 78.58 | 83.17 |
| AT4G31160.1 | Thale cress | cytosol, nucleus, plasma membrane | 79.69 | 80.62 |
| KRH52554 | Soybean | nucleus | 58.32 | 57.77 |
| KRH61892 | Soybean | cytosol | 57.64 | 56.57 |
| VIT_04s0008g03060.t01 | Wine grape | cytosol, nucleus, plasma membrane | 57.59 | 55.77 |
| Solyc08g074370.2.1 | Tomato | nucleus | 53.49 | 54.17 |
| GSMUA_Achr7P23160_001 | Banana | plasma membrane, plastid, vacuole | 46.14 | 51.34 |
| GSMUA_Achr3P22370_001 | Banana | cytosol | 44.51 | 51.02 |
| TraesCS2B01G630100.1 | Wheat | nucleus | 39.27 | 49.21 |
| KRH16085 | Soybean | cytosol | 18.43 | 49.02 |
| Os04t0691200-00 | Rice | cytosol | 15.43 | 46.45 |
| HORVU2Hr1G126010.3 | Barley | cytosol | 44.72 | 46.08 |
| TraesCS2A01G566600.1 | Wheat | nucleus | 45.51 | 45.58 |
| EES13157 | Sorghum | cytosol | 45.83 | 45.56 |
| TraesCS2D01G576800.1 | Wheat | cytosol | 45.25 | 45.32 |
| Zm00001d002933_P014 | Maize | cytosol | 45.04 | 45.11 |
| Zm00001d026691_P004 | Maize | cytosol | 45.3 | 45.07 |
| VIT_15s0021g02350.t01 | Wine grape | nucleus | 6.77 | 37.5 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:35.1 | EnsemblPlantsGene:Bra010248 | EnsemblPlants:Bra010248.1 | EnsemblPlants:Bra010248.1-P | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016567 | GO:GO:0019538 | InterPro:IPR001680 | InterPro:IPR006594 | InterPro:IPR015943 | InterPro:IPR017986 |
| InterPro:LisH | UniProt:M4D199 | PFAM:PF08513 | PFscan:PS50294 | PFscan:PS50896 | SMART:SM00320 |
| SMART:SM00667 | SUPFAM:SSF50978 | UniParc:UPI0002546D16 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom |
| InterPro:WD40_repeat_dom_sf | SEG:seg | : | : | : | : |
Description
AT4G31160 (E=0.0) DCAF1 | DCAF1 (DDB1-CUL4 ASSOCIATED FACTOR 1); nucleotide binding
Coordinates
chrA08:-:13406038..13412794
Molecular Weight (calculated)
206702.0 Da
IEP (calculated)
4.828
GRAVY (calculated)
-0.400
Length
1905 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDGQGNEPEV PNPTAENEQL ALAAETETEN SNGGGDNPKE EEGLIEKAQK LMEHITNGAN NPNPTVLHAL SHLLESQESL FIKENGFYSN GRGSHISGKL
0101: CKLIKENDEF FELISSTFLS ENTYSTAVKA ASARLLMNWL LTWTHPYIFD DAVTENFKKW VLEEAVKFPG EHSGSSEASD SEMLKTYSTG LLAHSLTSRG
0201: QLVEDVLTSG LSAKLMHYLR VRVIGEASTS RRDALHTTEA KHVSLKTKED GRSRVRRVVD TVEGDHVLEA DAGRETDVLS EGELEIDGRD RCNVPAVFDG
0301: KMKPGDGNTG RDDPSRNRLS RSKSRARGKV NEGATDTDSL LASPTSGRLG VRDRDQSKNL DVRNAEDGTK WLGKMKSGIM EIEREKNDEC FQDCVIGTKN
0401: ITDIVKRAVG AAETEARAAH APDEAVKAAG DAAAELVKTT ALEACFKFDF LNEPLGQEFK SSGSEEAAVA AARRAATTVI DAAEVSRNAT CVTSDQTAGT
0501: SSVETDATVD VGEVSLPDIE SLAQLQEKYC IQCLEILGEY VEVLGPVLHE KGVDVCITLL ERTSQLGDSF TLSPLLPDVM KLICALAAHR KFAAMFVDRG
0601: GLQKLLAVPR VTETFYGLSS CLYTIGSLQG IMERVCALPS DLIHQVVKLA IELLDCSQDQ ARKNSALFFA AAFVFRAILD AFDAHNSLQK LLAILKDAAS
0701: VRTGANSDRS APEVMTSSEK QMAFHTCFAL RQYFRAHLLL LVESIRPSRS GRGGVPKVPN IRAAHKPLDI SNEAVDAVFL QLQKDRKLGP TFVRTQWPAV
0801: NSFLASSGHV TMLELCQTPP VDRYLHDLLQ YAFGVLHIVT SIPDGRKAIV TAALSNNRAG IAVILDATNI SNSIVDPEII QPALNVLINL VCPPPSLSNK
0901: PLLAQNHQPV PDQATARPST DVPADNAPPT PVAPASSGLV GDRRIFLGAG TGSAGLAAKL EQVYRQAREA VRGNDGIKIL LKLLQPRIYV NPPATPDCLR
1001: ALACRVLLGL ARDDTIAQIL TKLEVGRSLS ELIRDSGGQS SGTDQVRWQA ELTQVALELI GIVTNSGHAN TLTASDAATP TLRRIERAAI AAATPITYDS
1101: KELLLLIHEH LQASGLGETA SALLKEAQLN PLPSLAPPSS IAYSATQEMS APVAQVQWPS GRASGGFFNS KPEVCAHDED PNSKCNAALS AKKKHLASST
1201: QETSTPVAQQ QWPSGRTNCG FFPSKPKVNA HEEDPSSRGN AAPSAKKKQL AFSPSFGSQS RKQSLYQDAQ PQSTQRINSS SNSDPACGDT SEAVAEKNDL
1301: DADAQFKTPT FPRKRKLSEL RETEMSTSSK RINLGELGPR TPACPTSASL RRSSTIAEAS GFQTPASALD VNQSGSSRLG QMTPASQIRL PSDPQPSEWL
1401: SLGSRVVQYL KPQHRQCRAP IKTHPPVSLL HPHVCPEPKR LLEAPLNITG RLGTRELQSY YSGVHGNRRD RQFVFSRFKS WRSYRDETAL FTSISLLGGT
1501: NHLAVGSHAG EIKIFDASSG NMLESVSGHQ APVTLVQSYV SGDTQLLLSS SYSDVQLWDA SDITVGSKHS FDGCKAAKFS NSGSLIAALS SEGPTKDVLL
1601: YNVETGSLSE KFTDPDTSSR TSPYTLVHFN PCDSLILWNG HLWDRRVPNS CKRFDQFTDY GGGGFHPSRN EVIINSEVWD LRNMNTRLIR SVPSLDQTAI
1701: TFNSRGDVIY AMLRRNIEDV MSAVNTRRAK HPLFAAFRTL DAVNYSDIAT IPVDRCLLDF ATEPTDSFLG LITMEDQDDM FSSARMYEIG RRRPTDDDSD
1801: PDDDGETEDE DEDDEDDEDD LDRILGLAGD DSDSGDDDMS SDDNEDNSAS DFDDDDGGMF FDGGIMEIVS EGDDEDDNGD SDGEDSDDDG DSISSGEEDF
1901: LNSIH
0101: CKLIKENDEF FELISSTFLS ENTYSTAVKA ASARLLMNWL LTWTHPYIFD DAVTENFKKW VLEEAVKFPG EHSGSSEASD SEMLKTYSTG LLAHSLTSRG
0201: QLVEDVLTSG LSAKLMHYLR VRVIGEASTS RRDALHTTEA KHVSLKTKED GRSRVRRVVD TVEGDHVLEA DAGRETDVLS EGELEIDGRD RCNVPAVFDG
0301: KMKPGDGNTG RDDPSRNRLS RSKSRARGKV NEGATDTDSL LASPTSGRLG VRDRDQSKNL DVRNAEDGTK WLGKMKSGIM EIEREKNDEC FQDCVIGTKN
0401: ITDIVKRAVG AAETEARAAH APDEAVKAAG DAAAELVKTT ALEACFKFDF LNEPLGQEFK SSGSEEAAVA AARRAATTVI DAAEVSRNAT CVTSDQTAGT
0501: SSVETDATVD VGEVSLPDIE SLAQLQEKYC IQCLEILGEY VEVLGPVLHE KGVDVCITLL ERTSQLGDSF TLSPLLPDVM KLICALAAHR KFAAMFVDRG
0601: GLQKLLAVPR VTETFYGLSS CLYTIGSLQG IMERVCALPS DLIHQVVKLA IELLDCSQDQ ARKNSALFFA AAFVFRAILD AFDAHNSLQK LLAILKDAAS
0701: VRTGANSDRS APEVMTSSEK QMAFHTCFAL RQYFRAHLLL LVESIRPSRS GRGGVPKVPN IRAAHKPLDI SNEAVDAVFL QLQKDRKLGP TFVRTQWPAV
0801: NSFLASSGHV TMLELCQTPP VDRYLHDLLQ YAFGVLHIVT SIPDGRKAIV TAALSNNRAG IAVILDATNI SNSIVDPEII QPALNVLINL VCPPPSLSNK
0901: PLLAQNHQPV PDQATARPST DVPADNAPPT PVAPASSGLV GDRRIFLGAG TGSAGLAAKL EQVYRQAREA VRGNDGIKIL LKLLQPRIYV NPPATPDCLR
1001: ALACRVLLGL ARDDTIAQIL TKLEVGRSLS ELIRDSGGQS SGTDQVRWQA ELTQVALELI GIVTNSGHAN TLTASDAATP TLRRIERAAI AAATPITYDS
1101: KELLLLIHEH LQASGLGETA SALLKEAQLN PLPSLAPPSS IAYSATQEMS APVAQVQWPS GRASGGFFNS KPEVCAHDED PNSKCNAALS AKKKHLASST
1201: QETSTPVAQQ QWPSGRTNCG FFPSKPKVNA HEEDPSSRGN AAPSAKKKQL AFSPSFGSQS RKQSLYQDAQ PQSTQRINSS SNSDPACGDT SEAVAEKNDL
1301: DADAQFKTPT FPRKRKLSEL RETEMSTSSK RINLGELGPR TPACPTSASL RRSSTIAEAS GFQTPASALD VNQSGSSRLG QMTPASQIRL PSDPQPSEWL
1401: SLGSRVVQYL KPQHRQCRAP IKTHPPVSLL HPHVCPEPKR LLEAPLNITG RLGTRELQSY YSGVHGNRRD RQFVFSRFKS WRSYRDETAL FTSISLLGGT
1501: NHLAVGSHAG EIKIFDASSG NMLESVSGHQ APVTLVQSYV SGDTQLLLSS SYSDVQLWDA SDITVGSKHS FDGCKAAKFS NSGSLIAALS SEGPTKDVLL
1601: YNVETGSLSE KFTDPDTSSR TSPYTLVHFN PCDSLILWNG HLWDRRVPNS CKRFDQFTDY GGGGFHPSRN EVIINSEVWD LRNMNTRLIR SVPSLDQTAI
1701: TFNSRGDVIY AMLRRNIEDV MSAVNTRRAK HPLFAAFRTL DAVNYSDIAT IPVDRCLLDF ATEPTDSFLG LITMEDQDDM FSSARMYEIG RRRPTDDDSD
1801: PDDDGETEDE DEDDEDDEDD LDRILGLAGD DSDSGDDDMS SDDNEDNSAS DFDDDDGGMF FDGGIMEIVS EGDDEDDNGD SDGEDSDDDG DSISSGEEDF
1901: LNSIH
0001: MDGQEHAEVP NSMVEDDQSV VAAEAIAELA NSTGEPNPEE GEEQSVEDEL IAKAQKLMED ITSVANNPNP NILHALSQLL ESQESLFLEE NGHFSNARGS
0101: HNSGKLCILI RENDEFFELI SSTFLSENSY STAVKAASAR LLMNCSLTWM YPHVFDDAVT ENFKNWVMEE AVKFPGEDSA KKEASDFEML KTYSTGLLAL
0201: SLASRGQIVE DVLTSGLSAK LMHYLRVRVL KEPSTSRIHT TETKHVSLKT KEEGRSRVRK IVDTVEGDHV LETDSGREMG QTDVQPDGEF EIDGRDVFNV
0301: SGVVDCKIKP GDDNSVRDDP SRHRLNRSKS RGRGRVHEGA PDTEVLLASP RLGRLLVRDR DLSKISDGRN AEDVTVCLGK MKSGIMEIER EDNDECFQGC
0401: IIGTKNITDL VKRAVGAAET EARAAHAPDD AAKAAGDAAA ELVKTAALEE FKSSGSEEAA VSAATRAAIT VIDAAEVSRN PTCVTSDQTT DVSEVSLPDI
0501: ESLAQLQEKY CIQCLEILGE YVEVLGPVLH EKGVDVCIVL LERTSQLDDR STVSPLLPDV MKLICALAAH RKFAAMFVER RGILKLLAVP RVSETFYGLS
0601: SCLYTIGSLQ GIMERVCALP LVVIHQVVKL AIELLDCSQD QARKNSALFF AAAFVFRAIL DAFDAQDSLQ KLLAILKDAA SVRTGANTDR SAPEVMTSSE
0701: KQMAFHTCFA LRQYFRAHLL LLVDSIRPSR ISRGGVPSSM KPNIRAAYKP LDISNEAVDA IFLQLQKDRR LGPTFVKAQW PAVNNFLASS GHVTMLELCQ
0801: TPPVDRYLHD LLQYAFGVLH IVTSIPDGRK AIAHATLSNN RAGIAVILDA ANISNSIVDP EIIQPALNVL INLVCPPPSL SNKPPLAQNH QPVPGQATTR
0901: PSTDVAVGTQ STGNAPQTPV APASSGLVGD RRIFLGAGTG SAGLAAKLEQ VYRQAREAVR GNDGIKILLK LLQPRIYVNP PATPDCLRAL ACRVLLGLAR
1001: DDTIAQILTK LEVGKSLSEL IRDSGGQSSG TDQGRWQAEL AQVALELIGI VTNSGHATTL TASDAATPTL RRIERAAIAA ATPITYDSKE LLLLIHEHLQ
1101: ASGLGDTASA LLKEAQLTPL PSSASPSSIA YSTTQEMSTP LAQEQWPSGR ANSGFFTSKP KVCAHDEDPN SRSNAALSAK KKHLASSTLE MPTPVAQQQW
1201: PSGRANCGFC PSIPKINARD EDPSSRGNAA PSAKKKQLTF SPSFSSQSRK QSFSHDALPQ STQRINCCSN SDPALADTSE TAAELVLKND LDADAQFKTP
1301: ISFPRKRKLS ELRDSSVPGK RIDLGERRNS TFADGSGLQT PASALDANQS GSSRLGQMTP ASQLRLPSDP QPSNPERLSL DSLVVQYLKH QHRQCLAPIT
1401: TLPPVSLLHP HVCPEPKRLL EAPLNMTGRL GTRELQSFYS GVHGNRRDRQ FVFSRFKSWR SFRDETALFT CIALLGGTNH IAVGSHAGEI KIFEASSGSM
1501: LESVSGHQAP VTLVQPYVSR DTQLLLSSSS SDVQLWDASS ITGGPRHSFD GCKAAKFSNS GLQFAALSCE ASRKDVLLYD VQTCSPCQKL TDTVTSSRSN
1601: PYSLVHFSPC DTLILWNGVL WDRRIPEKVR RFDQFTDYGG GGFHPSRNEV IINSEIWDMR TFKLLRSVPS LDQTAITFNS RGDVIYAMLR RNIEDVMSAV
1701: HTRRVKHPLF AAFRTLDAIN YSDIATIPVD RCLLDFATEP TDSFLGLITM EDQEDMFSSA RMYEIGRRRP TDDDSDPDDD DETEDEDEDD EEEDDLDRIL
1801: GLAGDNSDSG DDDLSSEDNE DSVSDFDEEA DILIDGDFME ELIEGENEDD GNGEDEDDDD DGEMQDFMSS GEEDDYRDNI RSS
0101: HNSGKLCILI RENDEFFELI SSTFLSENSY STAVKAASAR LLMNCSLTWM YPHVFDDAVT ENFKNWVMEE AVKFPGEDSA KKEASDFEML KTYSTGLLAL
0201: SLASRGQIVE DVLTSGLSAK LMHYLRVRVL KEPSTSRIHT TETKHVSLKT KEEGRSRVRK IVDTVEGDHV LETDSGREMG QTDVQPDGEF EIDGRDVFNV
0301: SGVVDCKIKP GDDNSVRDDP SRHRLNRSKS RGRGRVHEGA PDTEVLLASP RLGRLLVRDR DLSKISDGRN AEDVTVCLGK MKSGIMEIER EDNDECFQGC
0401: IIGTKNITDL VKRAVGAAET EARAAHAPDD AAKAAGDAAA ELVKTAALEE FKSSGSEEAA VSAATRAAIT VIDAAEVSRN PTCVTSDQTT DVSEVSLPDI
0501: ESLAQLQEKY CIQCLEILGE YVEVLGPVLH EKGVDVCIVL LERTSQLDDR STVSPLLPDV MKLICALAAH RKFAAMFVER RGILKLLAVP RVSETFYGLS
0601: SCLYTIGSLQ GIMERVCALP LVVIHQVVKL AIELLDCSQD QARKNSALFF AAAFVFRAIL DAFDAQDSLQ KLLAILKDAA SVRTGANTDR SAPEVMTSSE
0701: KQMAFHTCFA LRQYFRAHLL LLVDSIRPSR ISRGGVPSSM KPNIRAAYKP LDISNEAVDA IFLQLQKDRR LGPTFVKAQW PAVNNFLASS GHVTMLELCQ
0801: TPPVDRYLHD LLQYAFGVLH IVTSIPDGRK AIAHATLSNN RAGIAVILDA ANISNSIVDP EIIQPALNVL INLVCPPPSL SNKPPLAQNH QPVPGQATTR
0901: PSTDVAVGTQ STGNAPQTPV APASSGLVGD RRIFLGAGTG SAGLAAKLEQ VYRQAREAVR GNDGIKILLK LLQPRIYVNP PATPDCLRAL ACRVLLGLAR
1001: DDTIAQILTK LEVGKSLSEL IRDSGGQSSG TDQGRWQAEL AQVALELIGI VTNSGHATTL TASDAATPTL RRIERAAIAA ATPITYDSKE LLLLIHEHLQ
1101: ASGLGDTASA LLKEAQLTPL PSSASPSSIA YSTTQEMSTP LAQEQWPSGR ANSGFFTSKP KVCAHDEDPN SRSNAALSAK KKHLASSTLE MPTPVAQQQW
1201: PSGRANCGFC PSIPKINARD EDPSSRGNAA PSAKKKQLTF SPSFSSQSRK QSFSHDALPQ STQRINCCSN SDPALADTSE TAAELVLKND LDADAQFKTP
1301: ISFPRKRKLS ELRDSSVPGK RIDLGERRNS TFADGSGLQT PASALDANQS GSSRLGQMTP ASQLRLPSDP QPSNPERLSL DSLVVQYLKH QHRQCLAPIT
1401: TLPPVSLLHP HVCPEPKRLL EAPLNMTGRL GTRELQSFYS GVHGNRRDRQ FVFSRFKSWR SFRDETALFT CIALLGGTNH IAVGSHAGEI KIFEASSGSM
1501: LESVSGHQAP VTLVQPYVSR DTQLLLSSSS SDVQLWDASS ITGGPRHSFD GCKAAKFSNS GLQFAALSCE ASRKDVLLYD VQTCSPCQKL TDTVTSSRSN
1601: PYSLVHFSPC DTLILWNGVL WDRRIPEKVR RFDQFTDYGG GGFHPSRNEV IINSEIWDMR TFKLLRSVPS LDQTAITFNS RGDVIYAMLR RNIEDVMSAV
1701: HTRRVKHPLF AAFRTLDAIN YSDIATIPVD RCLLDFATEP TDSFLGLITM EDQEDMFSSA RMYEIGRRRP TDDDSDPDDD DETEDEDEDD EEEDDLDRIL
1801: GLAGDNSDSG DDDLSSEDNE DSVSDFDEEA DILIDGDFME ELIEGENEDD GNGEDEDDDD DGEMQDFMSS GEEDDYRDNI RSS
Arabidopsis Description
DCAF1DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M086]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.