Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os04t0691200-00 | Rice | cytosol | 33.42 | 80.25 |
| TraesCS2D01G576800.1 | Wheat | cytosol | 98.49 | 78.71 |
| TraesCS2A01G566600.1 | Wheat | nucleus | 98.49 | 78.71 |
| HORVU2Hr1G126010.3 | Barley | cytosol | 95.66 | 78.64 |
| EES13157 | Sorghum | cytosol | 77.24 | 61.27 |
| Zm00001d026691_P004 | Maize | cytosol | 76.25 | 60.52 |
| Zm00001d002933_P014 | Maize | cytosol | 73.36 | 58.62 |
| GSMUA_Achr3P22370_001 | Banana | cytosol | 55.99 | 51.2 |
| GSMUA_Achr7P23160_001 | Banana | plasma membrane, plastid, vacuole | 55.99 | 49.71 |
| Solyc08g074370.2.1 | Tomato | nucleus | 57.11 | 46.15 |
| VIT_04s0008g03060.t01 | Wine grape | cytosol, nucleus, plasma membrane | 58.75 | 45.4 |
| KRH52554 | Soybean | nucleus | 57.3 | 45.29 |
| KRH61892 | Soybean | cytosol | 57.3 | 44.87 |
| KRH16085 | Soybean | cytosol | 21.05 | 44.69 |
| CDY36454 | Canola | nucleus | 49.61 | 41.0 |
| CDY13413 | Canola | nucleus | 46.97 | 40.85 |
| CDX72295 | Canola | cytosol, nucleus, plastid | 46.97 | 40.73 |
| CDY23283 | Canola | nucleus | 49.28 | 40.57 |
| AT4G31160.1 | Thale cress | cytosol, nucleus, plasma membrane | 49.74 | 40.15 |
| Bra024021.1-P | Field mustard | nucleus | 46.71 | 39.44 |
| Bra010248.1-P | Field mustard | nucleus | 49.21 | 39.27 |
| VIT_15s0021g02350.t01 | Wine grape | nucleus | 7.63 | 33.72 |
| CDY03208 | Canola | nucleus | 0.86 | 6.7 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:35.1 | InterPro:ARM-type_fold | ncoils:Coil | GO:GO:0000003 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009793 | GO:GO:0009908 |
| GO:GO:0010154 | GO:GO:0048366 | GO:GO:0048367 | GO:GO:0048827 | InterPro:IPR001680 | InterPro:IPR006594 |
| InterPro:IPR015943 | InterPro:LisH | PFscan:PS50896 | PANTHER:PTHR13129 | SMART:SM00320 | SMART:SM00667 |
| SUPFAM:SSF48371 | SUPFAM:SSF50978 | EnsemblPlantsGene:TraesCS2B01G630100 | EnsemblPlants:TraesCS2B01G630100.1 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat |
| InterPro:WD40_repeat_dom_sf | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2B:-:801216973..801224042
Molecular Weight (calculated)
164210.0 Da
IEP (calculated)
4.872
GRAVY (calculated)
-0.232
Length
1520 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGNRTSKDKN AAKVEDPKKA IDLNNSSAAH ESDILSISKE EYEDRFRDCI IGLKDITDIV LKAVRAAEAE ARSANAPEEA VKAAGDAAAE LVKSAALEVW
0101: KSENSGDAVV LAAEKAAATV VDAAMSTSVS RSSDQVNEEH VVEEAVKISE DQDLEDFVII DQEQLLLLRE KYSILCLQYL GEYVEALGPV LHEKGVDVCL
0201: ALLQRGIKDQ EGCGHVSLLH EILRLICALA AHRKFAALFV DRGGIQKILS VPKITQTYTA LSACLFTFGS LQSTMERVCA LSPDTLNNVV ELALQLLECP
0301: QDAARKNAAI FFAAAFVFKA VLDSFDAQDG MQKLLNILQV AASVRSGGNS GALGSSNANQ GNDRSPAEIL TQSEKQVAYH SCVALRQYFR AHLLQLVDSI
0401: RPSKSIRSIA RNTSSARAGY KPFDIGNEAM DAIFRQVQRD RKLGPALVRA RWPVMDKFLA SNGHIILLEL CQSLPADRYL HDLAQYAFGV LHIITLMPHS
0501: RKLMVHATLT NNRIGMAVIL DIANSVVGYV DPEVICPALN VLVNLVCPPP SISNKPSSAV NQQPAGSYSE SRDRNAEKST SERNVAANQS ESRERYGDGT
0601: PVVSSGVVGD KRISLGVGAG GPGLAAQLEQ AYRQAREVVR ANNGIKILLQ LLGTRMVTHP LAIDAIRALA CRVLLGLARD DAIAHILTKL QVGKKLSELI
0701: RDTSTQSSGG DNARWLNELT QVAIELIAVL TNSGKETTLA TDAAAPALKR IERAGIAAAT PVSYHSRELM QLIHEHLLGS GLAATAAMLQ KEADLAPLPS
0801: TAAVLPVHQP AALEPSSVQV QQQWPSGRVQ GFLSDKTMIA ADQAGQRSDS VVPSSKKKAL VFSSSFSKRN QPFVSFSGNR ASNSLKSPVP AGNVDSMTCS
0901: ASAANTGDVE TSHKTPIPLP LKRKLADMEF SSASAAKRPA IMDQASQSPV FQTPAPTRRG LSVAVDSPTA AFHPGRTNFN NISTENFEDS QCTPGVVTGT
1001: PHLGVNDQQT GTSERMTLDS LVVQYLKHQH RQCPAPITTL PPVSLLHPHV CPEPSRSISA PANVTARMGS REINREFSGI KVPRRDRQFI YSRFKPCRVC
1101: RDDASLLTCM TFIGGASRVA AGNHSGELRI FDSNLANLIE THTCHQNLVT MVDSTSIGGT ELILSSSIDE VKLFDAFSLH TGPLHTFDNC KAARFNHAGT
1201: LFACLSTDAN HRAVLLYDVQ THNVDMQLPD NSSLPGSGRG VQPIIHFSPS DDMLLWNGVL WDRRSPTPIH QFDQFTDYCG GGFHPAGNEV ILNSEVWDLR
1301: KFKLLRSVPS LDQTVIKFNG SGDVIYAILR RNLEDVTSSI QTRRVRHPLF PAFRTIDAVT YADIATVQID RGVLDLATEP NDSLLGVVAM DDPDEMFSSA
1401: RIFEVGRKRP TDDDSDPEDG GDSEEDDDDD DDSDVDVLLG TDLGLGDTDS EDDPSNSSGD DGGDDDDEED MDSGDENDDD DEEGDFDVGG GLLEMMGGGE
1501: GDESDMIESF SSGEEEGWLM
0101: KSENSGDAVV LAAEKAAATV VDAAMSTSVS RSSDQVNEEH VVEEAVKISE DQDLEDFVII DQEQLLLLRE KYSILCLQYL GEYVEALGPV LHEKGVDVCL
0201: ALLQRGIKDQ EGCGHVSLLH EILRLICALA AHRKFAALFV DRGGIQKILS VPKITQTYTA LSACLFTFGS LQSTMERVCA LSPDTLNNVV ELALQLLECP
0301: QDAARKNAAI FFAAAFVFKA VLDSFDAQDG MQKLLNILQV AASVRSGGNS GALGSSNANQ GNDRSPAEIL TQSEKQVAYH SCVALRQYFR AHLLQLVDSI
0401: RPSKSIRSIA RNTSSARAGY KPFDIGNEAM DAIFRQVQRD RKLGPALVRA RWPVMDKFLA SNGHIILLEL CQSLPADRYL HDLAQYAFGV LHIITLMPHS
0501: RKLMVHATLT NNRIGMAVIL DIANSVVGYV DPEVICPALN VLVNLVCPPP SISNKPSSAV NQQPAGSYSE SRDRNAEKST SERNVAANQS ESRERYGDGT
0601: PVVSSGVVGD KRISLGVGAG GPGLAAQLEQ AYRQAREVVR ANNGIKILLQ LLGTRMVTHP LAIDAIRALA CRVLLGLARD DAIAHILTKL QVGKKLSELI
0701: RDTSTQSSGG DNARWLNELT QVAIELIAVL TNSGKETTLA TDAAAPALKR IERAGIAAAT PVSYHSRELM QLIHEHLLGS GLAATAAMLQ KEADLAPLPS
0801: TAAVLPVHQP AALEPSSVQV QQQWPSGRVQ GFLSDKTMIA ADQAGQRSDS VVPSSKKKAL VFSSSFSKRN QPFVSFSGNR ASNSLKSPVP AGNVDSMTCS
0901: ASAANTGDVE TSHKTPIPLP LKRKLADMEF SSASAAKRPA IMDQASQSPV FQTPAPTRRG LSVAVDSPTA AFHPGRTNFN NISTENFEDS QCTPGVVTGT
1001: PHLGVNDQQT GTSERMTLDS LVVQYLKHQH RQCPAPITTL PPVSLLHPHV CPEPSRSISA PANVTARMGS REINREFSGI KVPRRDRQFI YSRFKPCRVC
1101: RDDASLLTCM TFIGGASRVA AGNHSGELRI FDSNLANLIE THTCHQNLVT MVDSTSIGGT ELILSSSIDE VKLFDAFSLH TGPLHTFDNC KAARFNHAGT
1201: LFACLSTDAN HRAVLLYDVQ THNVDMQLPD NSSLPGSGRG VQPIIHFSPS DDMLLWNGVL WDRRSPTPIH QFDQFTDYCG GGFHPAGNEV ILNSEVWDLR
1301: KFKLLRSVPS LDQTVIKFNG SGDVIYAILR RNLEDVTSSI QTRRVRHPLF PAFRTIDAVT YADIATVQID RGVLDLATEP NDSLLGVVAM DDPDEMFSSA
1401: RIFEVGRKRP TDDDSDPEDG GDSEEDDDDD DDSDVDVLLG TDLGLGDTDS EDDPSNSSGD DGGDDDDEED MDSGDENDDD DEEGDFDVGG GLLEMMGGGE
1501: GDESDMIESF SSGEEEGWLM
0001: MDGQEHAEVP NSMVEDDQSV VAAEAIAELA NSTGEPNPEE GEEQSVEDEL IAKAQKLMED ITSVANNPNP NILHALSQLL ESQESLFLEE NGHFSNARGS
0101: HNSGKLCILI RENDEFFELI SSTFLSENSY STAVKAASAR LLMNCSLTWM YPHVFDDAVT ENFKNWVMEE AVKFPGEDSA KKEASDFEML KTYSTGLLAL
0201: SLASRGQIVE DVLTSGLSAK LMHYLRVRVL KEPSTSRIHT TETKHVSLKT KEEGRSRVRK IVDTVEGDHV LETDSGREMG QTDVQPDGEF EIDGRDVFNV
0301: SGVVDCKIKP GDDNSVRDDP SRHRLNRSKS RGRGRVHEGA PDTEVLLASP RLGRLLVRDR DLSKISDGRN AEDVTVCLGK MKSGIMEIER EDNDECFQGC
0401: IIGTKNITDL VKRAVGAAET EARAAHAPDD AAKAAGDAAA ELVKTAALEE FKSSGSEEAA VSAATRAAIT VIDAAEVSRN PTCVTSDQTT DVSEVSLPDI
0501: ESLAQLQEKY CIQCLEILGE YVEVLGPVLH EKGVDVCIVL LERTSQLDDR STVSPLLPDV MKLICALAAH RKFAAMFVER RGILKLLAVP RVSETFYGLS
0601: SCLYTIGSLQ GIMERVCALP LVVIHQVVKL AIELLDCSQD QARKNSALFF AAAFVFRAIL DAFDAQDSLQ KLLAILKDAA SVRTGANTDR SAPEVMTSSE
0701: KQMAFHTCFA LRQYFRAHLL LLVDSIRPSR ISRGGVPSSM KPNIRAAYKP LDISNEAVDA IFLQLQKDRR LGPTFVKAQW PAVNNFLASS GHVTMLELCQ
0801: TPPVDRYLHD LLQYAFGVLH IVTSIPDGRK AIAHATLSNN RAGIAVILDA ANISNSIVDP EIIQPALNVL INLVCPPPSL SNKPPLAQNH QPVPGQATTR
0901: PSTDVAVGTQ STGNAPQTPV APASSGLVGD RRIFLGAGTG SAGLAAKLEQ VYRQAREAVR GNDGIKILLK LLQPRIYVNP PATPDCLRAL ACRVLLGLAR
1001: DDTIAQILTK LEVGKSLSEL IRDSGGQSSG TDQGRWQAEL AQVALELIGI VTNSGHATTL TASDAATPTL RRIERAAIAA ATPITYDSKE LLLLIHEHLQ
1101: ASGLGDTASA LLKEAQLTPL PSSASPSSIA YSTTQEMSTP LAQEQWPSGR ANSGFFTSKP KVCAHDEDPN SRSNAALSAK KKHLASSTLE MPTPVAQQQW
1201: PSGRANCGFC PSIPKINARD EDPSSRGNAA PSAKKKQLTF SPSFSSQSRK QSFSHDALPQ STQRINCCSN SDPALADTSE TAAELVLKND LDADAQFKTP
1301: ISFPRKRKLS ELRDSSVPGK RIDLGERRNS TFADGSGLQT PASALDANQS GSSRLGQMTP ASQLRLPSDP QPSNPERLSL DSLVVQYLKH QHRQCLAPIT
1401: TLPPVSLLHP HVCPEPKRLL EAPLNMTGRL GTRELQSFYS GVHGNRRDRQ FVFSRFKSWR SFRDETALFT CIALLGGTNH IAVGSHAGEI KIFEASSGSM
1501: LESVSGHQAP VTLVQPYVSR DTQLLLSSSS SDVQLWDASS ITGGPRHSFD GCKAAKFSNS GLQFAALSCE ASRKDVLLYD VQTCSPCQKL TDTVTSSRSN
1601: PYSLVHFSPC DTLILWNGVL WDRRIPEKVR RFDQFTDYGG GGFHPSRNEV IINSEIWDMR TFKLLRSVPS LDQTAITFNS RGDVIYAMLR RNIEDVMSAV
1701: HTRRVKHPLF AAFRTLDAIN YSDIATIPVD RCLLDFATEP TDSFLGLITM EDQEDMFSSA RMYEIGRRRP TDDDSDPDDD DETEDEDEDD EEEDDLDRIL
1801: GLAGDNSDSG DDDLSSEDNE DSVSDFDEEA DILIDGDFME ELIEGENEDD GNGEDEDDDD DGEMQDFMSS GEEDDYRDNI RSS
0101: HNSGKLCILI RENDEFFELI SSTFLSENSY STAVKAASAR LLMNCSLTWM YPHVFDDAVT ENFKNWVMEE AVKFPGEDSA KKEASDFEML KTYSTGLLAL
0201: SLASRGQIVE DVLTSGLSAK LMHYLRVRVL KEPSTSRIHT TETKHVSLKT KEEGRSRVRK IVDTVEGDHV LETDSGREMG QTDVQPDGEF EIDGRDVFNV
0301: SGVVDCKIKP GDDNSVRDDP SRHRLNRSKS RGRGRVHEGA PDTEVLLASP RLGRLLVRDR DLSKISDGRN AEDVTVCLGK MKSGIMEIER EDNDECFQGC
0401: IIGTKNITDL VKRAVGAAET EARAAHAPDD AAKAAGDAAA ELVKTAALEE FKSSGSEEAA VSAATRAAIT VIDAAEVSRN PTCVTSDQTT DVSEVSLPDI
0501: ESLAQLQEKY CIQCLEILGE YVEVLGPVLH EKGVDVCIVL LERTSQLDDR STVSPLLPDV MKLICALAAH RKFAAMFVER RGILKLLAVP RVSETFYGLS
0601: SCLYTIGSLQ GIMERVCALP LVVIHQVVKL AIELLDCSQD QARKNSALFF AAAFVFRAIL DAFDAQDSLQ KLLAILKDAA SVRTGANTDR SAPEVMTSSE
0701: KQMAFHTCFA LRQYFRAHLL LLVDSIRPSR ISRGGVPSSM KPNIRAAYKP LDISNEAVDA IFLQLQKDRR LGPTFVKAQW PAVNNFLASS GHVTMLELCQ
0801: TPPVDRYLHD LLQYAFGVLH IVTSIPDGRK AIAHATLSNN RAGIAVILDA ANISNSIVDP EIIQPALNVL INLVCPPPSL SNKPPLAQNH QPVPGQATTR
0901: PSTDVAVGTQ STGNAPQTPV APASSGLVGD RRIFLGAGTG SAGLAAKLEQ VYRQAREAVR GNDGIKILLK LLQPRIYVNP PATPDCLRAL ACRVLLGLAR
1001: DDTIAQILTK LEVGKSLSEL IRDSGGQSSG TDQGRWQAEL AQVALELIGI VTNSGHATTL TASDAATPTL RRIERAAIAA ATPITYDSKE LLLLIHEHLQ
1101: ASGLGDTASA LLKEAQLTPL PSSASPSSIA YSTTQEMSTP LAQEQWPSGR ANSGFFTSKP KVCAHDEDPN SRSNAALSAK KKHLASSTLE MPTPVAQQQW
1201: PSGRANCGFC PSIPKINARD EDPSSRGNAA PSAKKKQLTF SPSFSSQSRK QSFSHDALPQ STQRINCCSN SDPALADTSE TAAELVLKND LDADAQFKTP
1301: ISFPRKRKLS ELRDSSVPGK RIDLGERRNS TFADGSGLQT PASALDANQS GSSRLGQMTP ASQLRLPSDP QPSNPERLSL DSLVVQYLKH QHRQCLAPIT
1401: TLPPVSLLHP HVCPEPKRLL EAPLNMTGRL GTRELQSFYS GVHGNRRDRQ FVFSRFKSWR SFRDETALFT CIALLGGTNH IAVGSHAGEI KIFEASSGSM
1501: LESVSGHQAP VTLVQPYVSR DTQLLLSSSS SDVQLWDASS ITGGPRHSFD GCKAAKFSNS GLQFAALSCE ASRKDVLLYD VQTCSPCQKL TDTVTSSRSN
1601: PYSLVHFSPC DTLILWNGVL WDRRIPEKVR RFDQFTDYGG GGFHPSRNEV IINSEIWDMR TFKLLRSVPS LDQTAITFNS RGDVIYAMLR RNIEDVMSAV
1701: HTRRVKHPLF AAFRTLDAIN YSDIATIPVD RCLLDFATEP TDSFLGLITM EDQEDMFSSA RMYEIGRRRP TDDDSDPDDD DETEDEDEDD EEEDDLDRIL
1801: GLAGDNSDSG DDDLSSEDNE DSVSDFDEEA DILIDGDFME ELIEGENEDD GNGEDEDDDD DGEMQDFMSS GEEDDYRDNI RSS
Arabidopsis Description
DCAF1DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M086]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.