Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY23283 | Canola | nucleus | 96.74 | 96.37 |
| CDY13413 | Canola | nucleus | 78.85 | 82.95 |
| CDX72295 | Canola | cytosol, nucleus, plastid | 78.25 | 82.09 |
| AT4G31160.1 | Thale cress | cytosol, nucleus, plasma membrane | 79.72 | 77.85 |
| KRH52554 | Soybean | nucleus | 59.92 | 57.31 |
| KRH61892 | Soybean | cytosol | 59.65 | 56.52 |
| VIT_04s0008g03060.t01 | Wine grape | cytosol, nucleus, plasma membrane | 59.54 | 55.67 |
| Solyc08g074370.2.1 | Tomato | nucleus | 55.52 | 54.28 |
| GSMUA_Achr3P22370_001 | Banana | cytosol | 46.93 | 51.93 |
| GSMUA_Achr7P23160_001 | Banana | plasma membrane, plastid, vacuole | 47.53 | 51.05 |
| CDY03208 | Canola | nucleus | 5.27 | 50.0 |
| TraesCS2B01G630100.1 | Wheat | nucleus | 41.0 | 49.61 |
| KRH16085 | Soybean | cytosol | 19.3 | 49.58 |
| Os04t0691200-00 | Rice | cytosol | 16.04 | 46.6 |
| HORVU2Hr1G126010.3 | Barley | cytosol | 46.55 | 46.3 |
| EES13157 | Sorghum | cytosol | 47.85 | 45.93 |
| TraesCS2A01G566600.1 | Wheat | nucleus | 47.31 | 45.74 |
| TraesCS2D01G576800.1 | Wheat | cytosol | 47.2 | 45.64 |
| Zm00001d002933_P014 | Maize | cytosol | 47.04 | 45.48 |
| Zm00001d026691_P004 | Maize | cytosol | 47.25 | 45.38 |
| VIT_15s0021g02350.t01 | Wine grape | nucleus | 6.53 | 34.88 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:35.1 | UniProt:A0A078HGB4 | EnsemblPlants:CDY36454 | ProteinID:CDY36454 | ProteinID:CDY36454.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016567 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00062102001 | InterPro:IPR001680 | InterPro:IPR006594 |
| InterPro:IPR015943 | InterPro:IPR017986 | InterPro:LisH | PFAM:PF08513 | PFscan:PS50294 | PFscan:PS50896 |
| PANTHER:PTHR13129 | SMART:SM00320 | SMART:SM00667 | SUPFAM:SSF50978 | UniPathway:UPA00143 | UniParc:UPI0004EEBFDD |
| InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : |
Description
BnaC03g67740DBnaC03g67740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HGB4]
Coordinates
chrLK032376:-:167499..174298
Molecular Weight (calculated)
199633.0 Da
IEP (calculated)
4.748
GRAVY (calculated)
-0.358
Length
1839 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDGQGNEPEV PNPTAESEQL ALAVEAETET ENSTGGGGGD NPKEDGLIEK AQKLMEHITA GANNPNPTVL HALSHLLESQ ESLFIKENGF YSNGRGSHIS
0101: GKLCKLIKEN DEFFELISST FLSENTYSTA VKAASARLLM NWLLTWTHPY VFDDAVTENF KKWVLEEAVK FPGEHSGSSE ASDSEMLKTY STGLLAHSLT
0201: SRGQLVEDVL TSGLSAKLMH YLRVRVIGEA STSRRDALHA TEAKHVSLKT KEDGRSRVRR VVDTVEGDHV LEGESGRETD VLSEGELEID GRDRCNVPAV
0301: FDGKMKPGED NTGRDDPSRN RLNRSKSRAR GKVNEGATNT DSLLASPTSG RLGVRDRDQS KNLDVRNAED GTIWLGKMKS GIMEIEREKN DECFQDCVIG
0401: TKNITDIVKR AVGAAETEAR AAHAPDEAVK AAGDAAAELV KTAALEACFY FDFPNEPLVQ EFKSSGSEEA AVAAARRAAT TVIDAAEVSR NPTCVTSDQT
0501: AGTSKVSLPD IESLAQLQEK YCIQCLEILG EYVEVLGPVL HEKGVDVCIT LLERTSQLGD SFTLSPLLPD VMKLICALAA HRKFAAMFVD RGGLQKLLAV
0601: PRVTETFYGL SSCLYTIGSL QGIMERVCAL PSDLIHQVVK LAIELLDCSQ DQARKNSALF FAAAFVFRAI LDAFDAHNSL QKLLAILKDA ASVRTGANSD
0701: RSPPEVMTSS EKQMAFHTCF ALRQYFRAHL LLLVESIRPS RSGRGGVPKV PNIRAAHKPL DISNEAVDAV FLQLQKDRKL GPTFVRTQWP AVNNFLASSG
0801: HVTMLELCQT PPVDRYLHDL LQYAFGVLHI VTSIPDGRKA IVTATLSNNR AGIAVILDAT NISNSIVDPE IIQPALNVLI NLVCPPPSLS NKPLLVQNHQ
0901: PVPDQATARP STDVPADNAP PTPVAPASSG LVGDRRIFLG AGTGSAGLAA KLEQVYRQAR EAVRGNDGIK ILLKLLQPRI YVNPPATPDC LRALACRVLL
1001: GLARDDTIAQ ILTKLEVGRS LSELIRDSGG QSSGTDQVRW QAELTQVALE LIGIVTNSGH ANTLTASDAA TPTLRRIERA AIAAATPITY DSKELLLLIH
1101: EHLQASGLGE TASALLKEAQ LNPLPSLAPP SSIAYSATQE ISAPVAQVQW PSGRASGGFF NSKPEVCAHD EDPNSRCNAA LSAKKKQLAS STPETSTPDT
1201: QAQSMQRINS NSNSDPACAD TTEAAAEIVL KNDLDADAQF KTPTFPRKRK LSELRETEMS TSSKRINLGE LGPRTPACPT TASLRRNSTI AEASGFQTPA
1301: SALDVNQSGS SRLGQMTPAS QLRLPSDPQP SERLSLDSLV VQYLKHQHRQ CRAPITTLPP VSLLHPHVCP EPKRLLEAPL NITDRLGTRE LQSYYSGVHG
1401: NRRDRQFVFS RFKSWRSYRD ETALFTSISL LGGTNHLAVG SHAGEIKIFD ASSGNMLESV SGHQAPVTLV QSHVSGDTQL LLSSSYSDVQ LWDASNITVG
1501: SKHSFDGCKA AKFSNSGSLI AALSSEGPTK DVLLYNVETG SLSEKFTDPD TSSRTSPYSL VHFNPCDSLI LWNGHLWDRR IPNSCKRFDQ FTDYGGGGFH
1601: PSRNEVIINS EVWDLRNMNT RLIRSVPSLD QTAITFNSRG DVIYAMLRRN IEDVMSAVNT RRAKHPLFAA FRTLDAVNYS DIGTIPVDRC LLDFATEPTD
1701: SFLGLITMED QDDMFSSARM YEIGRRRPTD DDSDPDDDGE TEDEDEDDED DEDDLDRILG LAGDDSDSGD DDMSSDDNED NSASDFDDDD GGMFFDGGIM
1801: EIVSDGDDED DIGDSDGEDS ADDGDSISSG EEDFLNSIH
0101: GKLCKLIKEN DEFFELISST FLSENTYSTA VKAASARLLM NWLLTWTHPY VFDDAVTENF KKWVLEEAVK FPGEHSGSSE ASDSEMLKTY STGLLAHSLT
0201: SRGQLVEDVL TSGLSAKLMH YLRVRVIGEA STSRRDALHA TEAKHVSLKT KEDGRSRVRR VVDTVEGDHV LEGESGRETD VLSEGELEID GRDRCNVPAV
0301: FDGKMKPGED NTGRDDPSRN RLNRSKSRAR GKVNEGATNT DSLLASPTSG RLGVRDRDQS KNLDVRNAED GTIWLGKMKS GIMEIEREKN DECFQDCVIG
0401: TKNITDIVKR AVGAAETEAR AAHAPDEAVK AAGDAAAELV KTAALEACFY FDFPNEPLVQ EFKSSGSEEA AVAAARRAAT TVIDAAEVSR NPTCVTSDQT
0501: AGTSKVSLPD IESLAQLQEK YCIQCLEILG EYVEVLGPVL HEKGVDVCIT LLERTSQLGD SFTLSPLLPD VMKLICALAA HRKFAAMFVD RGGLQKLLAV
0601: PRVTETFYGL SSCLYTIGSL QGIMERVCAL PSDLIHQVVK LAIELLDCSQ DQARKNSALF FAAAFVFRAI LDAFDAHNSL QKLLAILKDA ASVRTGANSD
0701: RSPPEVMTSS EKQMAFHTCF ALRQYFRAHL LLLVESIRPS RSGRGGVPKV PNIRAAHKPL DISNEAVDAV FLQLQKDRKL GPTFVRTQWP AVNNFLASSG
0801: HVTMLELCQT PPVDRYLHDL LQYAFGVLHI VTSIPDGRKA IVTATLSNNR AGIAVILDAT NISNSIVDPE IIQPALNVLI NLVCPPPSLS NKPLLVQNHQ
0901: PVPDQATARP STDVPADNAP PTPVAPASSG LVGDRRIFLG AGTGSAGLAA KLEQVYRQAR EAVRGNDGIK ILLKLLQPRI YVNPPATPDC LRALACRVLL
1001: GLARDDTIAQ ILTKLEVGRS LSELIRDSGG QSSGTDQVRW QAELTQVALE LIGIVTNSGH ANTLTASDAA TPTLRRIERA AIAAATPITY DSKELLLLIH
1101: EHLQASGLGE TASALLKEAQ LNPLPSLAPP SSIAYSATQE ISAPVAQVQW PSGRASGGFF NSKPEVCAHD EDPNSRCNAA LSAKKKQLAS STPETSTPDT
1201: QAQSMQRINS NSNSDPACAD TTEAAAEIVL KNDLDADAQF KTPTFPRKRK LSELRETEMS TSSKRINLGE LGPRTPACPT TASLRRNSTI AEASGFQTPA
1301: SALDVNQSGS SRLGQMTPAS QLRLPSDPQP SERLSLDSLV VQYLKHQHRQ CRAPITTLPP VSLLHPHVCP EPKRLLEAPL NITDRLGTRE LQSYYSGVHG
1401: NRRDRQFVFS RFKSWRSYRD ETALFTSISL LGGTNHLAVG SHAGEIKIFD ASSGNMLESV SGHQAPVTLV QSHVSGDTQL LLSSSYSDVQ LWDASNITVG
1501: SKHSFDGCKA AKFSNSGSLI AALSSEGPTK DVLLYNVETG SLSEKFTDPD TSSRTSPYSL VHFNPCDSLI LWNGHLWDRR IPNSCKRFDQ FTDYGGGGFH
1601: PSRNEVIINS EVWDLRNMNT RLIRSVPSLD QTAITFNSRG DVIYAMLRRN IEDVMSAVNT RRAKHPLFAA FRTLDAVNYS DIGTIPVDRC LLDFATEPTD
1701: SFLGLITMED QDDMFSSARM YEIGRRRPTD DDSDPDDDGE TEDEDEDDED DEDDLDRILG LAGDDSDSGD DDMSSDDNED NSASDFDDDD GGMFFDGGIM
1801: EIVSDGDDED DIGDSDGEDS ADDGDSISSG EEDFLNSIH
0001: MDGQEHAEVP NSMVEDDQSV VAAEAIAELA NSTGEPNPEE GEEQSVEDEL IAKAQKLMED ITSVANNPNP NILHALSQLL ESQESLFLEE NGHFSNARGS
0101: HNSGKLCILI RENDEFFELI SSTFLSENSY STAVKAASAR LLMNCSLTWM YPHVFDDAVT ENFKNWVMEE AVKFPGEDSA KKEASDFEML KTYSTGLLAL
0201: SLASRGQIVE DVLTSGLSAK LMHYLRVRVL KEPSTSRIHT TETKHVSLKT KEEGRSRVRK IVDTVEGDHV LETDSGREMG QTDVQPDGEF EIDGRDVFNV
0301: SGVVDCKIKP GDDNSVRDDP SRHRLNRSKS RGRGRVHEGA PDTEVLLASP RLGRLLVRDR DLSKISDGRN AEDVTVCLGK MKSGIMEIER EDNDECFQGC
0401: IIGTKNITDL VKRAVGAAET EARAAHAPDD AAKAAGDAAA ELVKTAALEE FKSSGSEEAA VSAATRAAIT VIDAAEVSRN PTCVTSDQTT DVSEVSLPDI
0501: ESLAQLQEKY CIQCLEILGE YVEVLGPVLH EKGVDVCIVL LERTSQLDDR STVSPLLPDV MKLICALAAH RKFAAMFVER RGILKLLAVP RVSETFYGLS
0601: SCLYTIGSLQ GIMERVCALP LVVIHQVVKL AIELLDCSQD QARKNSALFF AAAFVFRAIL DAFDAQDSLQ KLLAILKDAA SVRTGANTDR SAPEVMTSSE
0701: KQMAFHTCFA LRQYFRAHLL LLVDSIRPSR ISRGGVPSSM KPNIRAAYKP LDISNEAVDA IFLQLQKDRR LGPTFVKAQW PAVNNFLASS GHVTMLELCQ
0801: TPPVDRYLHD LLQYAFGVLH IVTSIPDGRK AIAHATLSNN RAGIAVILDA ANISNSIVDP EIIQPALNVL INLVCPPPSL SNKPPLAQNH QPVPGQATTR
0901: PSTDVAVGTQ STGNAPQTPV APASSGLVGD RRIFLGAGTG SAGLAAKLEQ VYRQAREAVR GNDGIKILLK LLQPRIYVNP PATPDCLRAL ACRVLLGLAR
1001: DDTIAQILTK LEVGKSLSEL IRDSGGQSSG TDQGRWQAEL AQVALELIGI VTNSGHATTL TASDAATPTL RRIERAAIAA ATPITYDSKE LLLLIHEHLQ
1101: ASGLGDTASA LLKEAQLTPL PSSASPSSIA YSTTQEMSTP LAQEQWPSGR ANSGFFTSKP KVCAHDEDPN SRSNAALSAK KKHLASSTLE MPTPVAQQQW
1201: PSGRANCGFC PSIPKINARD EDPSSRGNAA PSAKKKQLTF SPSFSSQSRK QSFSHDALPQ STQRINCCSN SDPALADTSE TAAELVLKND LDADAQFKTP
1301: ISFPRKRKLS ELRDSSVPGK RIDLGERRNS TFADGSGLQT PASALDANQS GSSRLGQMTP ASQLRLPSDP QPSNPERLSL DSLVVQYLKH QHRQCLAPIT
1401: TLPPVSLLHP HVCPEPKRLL EAPLNMTGRL GTRELQSFYS GVHGNRRDRQ FVFSRFKSWR SFRDETALFT CIALLGGTNH IAVGSHAGEI KIFEASSGSM
1501: LESVSGHQAP VTLVQPYVSR DTQLLLSSSS SDVQLWDASS ITGGPRHSFD GCKAAKFSNS GLQFAALSCE ASRKDVLLYD VQTCSPCQKL TDTVTSSRSN
1601: PYSLVHFSPC DTLILWNGVL WDRRIPEKVR RFDQFTDYGG GGFHPSRNEV IINSEIWDMR TFKLLRSVPS LDQTAITFNS RGDVIYAMLR RNIEDVMSAV
1701: HTRRVKHPLF AAFRTLDAIN YSDIATIPVD RCLLDFATEP TDSFLGLITM EDQEDMFSSA RMYEIGRRRP TDDDSDPDDD DETEDEDEDD EEEDDLDRIL
1801: GLAGDNSDSG DDDLSSEDNE DSVSDFDEEA DILIDGDFME ELIEGENEDD GNGEDEDDDD DGEMQDFMSS GEEDDYRDNI RSS
0101: HNSGKLCILI RENDEFFELI SSTFLSENSY STAVKAASAR LLMNCSLTWM YPHVFDDAVT ENFKNWVMEE AVKFPGEDSA KKEASDFEML KTYSTGLLAL
0201: SLASRGQIVE DVLTSGLSAK LMHYLRVRVL KEPSTSRIHT TETKHVSLKT KEEGRSRVRK IVDTVEGDHV LETDSGREMG QTDVQPDGEF EIDGRDVFNV
0301: SGVVDCKIKP GDDNSVRDDP SRHRLNRSKS RGRGRVHEGA PDTEVLLASP RLGRLLVRDR DLSKISDGRN AEDVTVCLGK MKSGIMEIER EDNDECFQGC
0401: IIGTKNITDL VKRAVGAAET EARAAHAPDD AAKAAGDAAA ELVKTAALEE FKSSGSEEAA VSAATRAAIT VIDAAEVSRN PTCVTSDQTT DVSEVSLPDI
0501: ESLAQLQEKY CIQCLEILGE YVEVLGPVLH EKGVDVCIVL LERTSQLDDR STVSPLLPDV MKLICALAAH RKFAAMFVER RGILKLLAVP RVSETFYGLS
0601: SCLYTIGSLQ GIMERVCALP LVVIHQVVKL AIELLDCSQD QARKNSALFF AAAFVFRAIL DAFDAQDSLQ KLLAILKDAA SVRTGANTDR SAPEVMTSSE
0701: KQMAFHTCFA LRQYFRAHLL LLVDSIRPSR ISRGGVPSSM KPNIRAAYKP LDISNEAVDA IFLQLQKDRR LGPTFVKAQW PAVNNFLASS GHVTMLELCQ
0801: TPPVDRYLHD LLQYAFGVLH IVTSIPDGRK AIAHATLSNN RAGIAVILDA ANISNSIVDP EIIQPALNVL INLVCPPPSL SNKPPLAQNH QPVPGQATTR
0901: PSTDVAVGTQ STGNAPQTPV APASSGLVGD RRIFLGAGTG SAGLAAKLEQ VYRQAREAVR GNDGIKILLK LLQPRIYVNP PATPDCLRAL ACRVLLGLAR
1001: DDTIAQILTK LEVGKSLSEL IRDSGGQSSG TDQGRWQAEL AQVALELIGI VTNSGHATTL TASDAATPTL RRIERAAIAA ATPITYDSKE LLLLIHEHLQ
1101: ASGLGDTASA LLKEAQLTPL PSSASPSSIA YSTTQEMSTP LAQEQWPSGR ANSGFFTSKP KVCAHDEDPN SRSNAALSAK KKHLASSTLE MPTPVAQQQW
1201: PSGRANCGFC PSIPKINARD EDPSSRGNAA PSAKKKQLTF SPSFSSQSRK QSFSHDALPQ STQRINCCSN SDPALADTSE TAAELVLKND LDADAQFKTP
1301: ISFPRKRKLS ELRDSSVPGK RIDLGERRNS TFADGSGLQT PASALDANQS GSSRLGQMTP ASQLRLPSDP QPSNPERLSL DSLVVQYLKH QHRQCLAPIT
1401: TLPPVSLLHP HVCPEPKRLL EAPLNMTGRL GTRELQSFYS GVHGNRRDRQ FVFSRFKSWR SFRDETALFT CIALLGGTNH IAVGSHAGEI KIFEASSGSM
1501: LESVSGHQAP VTLVQPYVSR DTQLLLSSSS SDVQLWDASS ITGGPRHSFD GCKAAKFSNS GLQFAALSCE ASRKDVLLYD VQTCSPCQKL TDTVTSSRSN
1601: PYSLVHFSPC DTLILWNGVL WDRRIPEKVR RFDQFTDYGG GGFHPSRNEV IINSEIWDMR TFKLLRSVPS LDQTAITFNS RGDVIYAMLR RNIEDVMSAV
1701: HTRRVKHPLF AAFRTLDAIN YSDIATIPVD RCLLDFATEP TDSFLGLITM EDQEDMFSSA RMYEIGRRRP TDDDSDPDDD DETEDEDEDD EEEDDLDRIL
1801: GLAGDNSDSG DDDLSSEDNE DSVSDFDEEA DILIDGDFME ELIEGENEDD GNGEDEDDDD DGEMQDFMSS GEEDDYRDNI RSS
Arabidopsis Description
DCAF1DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M086]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.