Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G630100.1 | Wheat | nucleus | 78.71 | 98.49 |
| TraesCS2A01G566600.1 | Wheat | nucleus | 98.37 | 98.37 |
| HORVU2Hr1G126010.3 | Barley | cytosol | 92.06 | 94.7 |
| Os04t0691200-00 | Rice | cytosol | 26.81 | 80.57 |
| EES13157 | Sorghum | cytosol | 72.24 | 71.71 |
| Zm00001d026691_P004 | Maize | cytosol | 71.4 | 70.91 |
| Zm00001d002933_P014 | Maize | cytosol | 68.72 | 68.72 |
| GSMUA_Achr3P22370_001 | Banana | cytosol | 50.95 | 58.3 |
| GSMUA_Achr7P23160_001 | Banana | plasma membrane, plastid, vacuole | 50.58 | 56.19 |
| Solyc08g074370.2.1 | Tomato | nucleus | 51.52 | 52.1 |
| VIT_04s0008g03060.t01 | Wine grape | cytosol, nucleus, plasma membrane | 53.63 | 51.86 |
| KRH52554 | Soybean | nucleus | 52.16 | 51.59 |
| KRH61892 | Soybean | cytosol | 52.26 | 51.21 |
| CDY36454 | Canola | nucleus | 45.64 | 47.2 |
| CDX72295 | Canola | cytosol, nucleus, plastid | 43.27 | 46.95 |
| CDY13413 | Canola | nucleus | 43.06 | 46.85 |
| CDY23283 | Canola | nucleus | 45.43 | 46.8 |
| AT4G31160.1 | Thale cress | cytosol, nucleus, plasma membrane | 45.64 | 46.1 |
| Bra024021.1-P | Field mustard | nucleus | 42.9 | 45.33 |
| Bra010248.1-P | Field mustard | nucleus | 45.32 | 45.25 |
| KRH16085 | Soybean | cytosol | 16.72 | 44.41 |
| VIT_15s0021g02350.t01 | Wine grape | nucleus | 6.15 | 34.01 |
| CDY03208 | Canola | nucleus | 3.0 | 29.38 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:35.1 | InterPro:ARM-type_fold | ncoils:Coil | GO:GO:0000003 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009793 | GO:GO:0009908 |
| GO:GO:0010154 | GO:GO:0048366 | GO:GO:0048367 | GO:GO:0048827 | InterPro:IPR001680 | InterPro:IPR006594 |
| InterPro:IPR015943 | InterPro:LisH | PFscan:PS50896 | SMART:SM00320 | SMART:SM00667 | SUPFAM:SSF48371 |
| SUPFAM:SSF50978 | EnsemblPlantsGene:TraesCS2D01G576800 | EnsemblPlants:TraesCS2D01G576800.1 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2D:+:640206988..640216068
Molecular Weight (calculated)
206538.0 Da
IEP (calculated)
4.662
GRAVY (calculated)
-0.344
Length
1902 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEPEQPAADP AAAEPEDEEE EEEEEETEAP DAEQEAAEDE EDALLDRAQA LISRVVEQES NPNPRLIHTL ATMCEVQEAR HLQECASDPS FNNTNTRGSH
0101: TIGKLASLIR ENDDFYDLVF SKFLSDTSYP LPVRCASARL LLSIQDAFSP QFSHPFEDAT LENIKSWIKE DGEASDECDW KHLGSGKKPT DTEMMRTYAI
0201: GLLSMALYGG GRLVEDVLNM GVSAKLMRFL RIRVFGDATS PEKDANLPLD TKHPRGRDEN RGKVRLLQDS SILDGTRAGD GISTDPTLEK QFDRDVGMRQ
0301: AHGEQGMDDT GYLLRDDVDS TMDPFDAKSV DGEKYPAGES LRDELLKRKF SRTGSRLRGK IKPGEGLPES ERTPLSPTGL RMGSRTSKEK NAAKVEDPKK
0401: AIDLNNSSAA PESDILSISK EEYEDRFRDC IIGLKDITDI VLKAVRAAEA EARSANAPEE AVKAAGDAAA ELVKSAALEA WKSENSGDAV VLAAEKAAAT
0501: VVDAAMSTSV SRSSDQVNEE HVVEEAVKIS EDQDLEDFVI IDQEQLLLLR EKYSILCLQY LGEYVEALGP VLHEKGVDVC LALLQRGIKD QEGCGHVSLL
0601: HEILRLICAL AAHRKFAALF VDRGGIQKIL SVPKITQTYT ALSACLFTFG SLQSTMERVC ALSPDTLNNV VELALQLLEC PQDAARKNAA IFFAAAFVFK
0701: AVLDSFDAQD GMQKLLNILQ VAASVRSGGN SGALGSSNAN QGNDRSPAEI LTQSEKQVAY HSCVALRQYF RAHLLQLVDS IRPSKSIRSI ARNTSSARAG
0801: YKPFDIGNEA MDAIFRQVQR DRKLGPALVR ARWPVMDKFL ASNGHIILLE LCQSLPADRY LHDLAQYAFG VLHIITLMPH SRKLMVHATL TNNRIGMAVI
0901: LDIANSVVGY VDPEVICPAL NVLVNLVCPP PSISNKPSSA VNQQPAGSYS ESRDRNAEKS TSERNVAANQ SESRERYGDG TPVVSSGVVG DKRISLGVGA
1001: GGPGLAAQLE QAYRQAREVV RANNGIKILL QLLGTRMVTH PLAIDPIRAL ACRVLLGLAR DDAIAHILTK LQVGKKLSEL IRDTSTQSSG GDNARWLNEL
1101: TQVAIELIAV LTNSGKETTL ATDAAAPALK RIERAGIAAA TPVSYHSREL MQLIHEHLVG SGLAATAAML QKEADLAPLP STAAVLPVHQ PAALEPSSVQ
1201: VQQQWPSGRV QGFLSDKTMI AADQAGQRSD SVVPSSKKKA LVFSSSFSKR NQPFVSFSGN RASNSLKSPV PAGNVDGMTC SASAANTGDV ETSHKTPMPL
1301: PLKRKLADME FSSASAAKRP AIMDQASQSP VFQTPAPTRR GLSVAVDSPT AAFHPGRTNF NNISTENFED SQCTPGVVTG TPHLGVNDQQ PGTSERMTLD
1401: SLVVQYLKHQ HRQCPAPITT LPPVSLLHPH VCPEPSRSIS APANVTARMG SREINREFSG IKVPRRDRQF IYSRFKPCRV CRDEASLLTC MTFIGGASRV
1501: AAGNHSGELR IFDSNLANLI ETHTCHQNLV TMVDSTSIGG TELILSSSID EVKLFDAFSL HTGPLHTFEN CKAARFNHAG TLFAGLSTDA NHRVVLLYDV
1601: QTHNVDMQLP DNSSLPGSGR GVQPIIHFSP SDDMLLWNGV LWDRRSPTPI HQFDQFTDYC GGGFHPAGNE VILNSEVWDL RKFKLLRSVP SLDQTVIKFN
1701: GSGDVIYAIL RRNLEDVTSS IQTRRVRHPL FPAFRTIDAV TYADIATVQI DRGVLDLATE PNDSLLGVVA MDDPDEMFSS ARIFEVGRKR PTDDDSDPED
1801: GGDTEDEDDD DDDSDVDVLL GTDLGLGDTD SEDDPSNSSG DDGGDDEDEE DMDSGDENDD DDEEGDFDVG GGLLEMMGGG DGDESGDMIE SFSSGEDEGW
1901: LM
0101: TIGKLASLIR ENDDFYDLVF SKFLSDTSYP LPVRCASARL LLSIQDAFSP QFSHPFEDAT LENIKSWIKE DGEASDECDW KHLGSGKKPT DTEMMRTYAI
0201: GLLSMALYGG GRLVEDVLNM GVSAKLMRFL RIRVFGDATS PEKDANLPLD TKHPRGRDEN RGKVRLLQDS SILDGTRAGD GISTDPTLEK QFDRDVGMRQ
0301: AHGEQGMDDT GYLLRDDVDS TMDPFDAKSV DGEKYPAGES LRDELLKRKF SRTGSRLRGK IKPGEGLPES ERTPLSPTGL RMGSRTSKEK NAAKVEDPKK
0401: AIDLNNSSAA PESDILSISK EEYEDRFRDC IIGLKDITDI VLKAVRAAEA EARSANAPEE AVKAAGDAAA ELVKSAALEA WKSENSGDAV VLAAEKAAAT
0501: VVDAAMSTSV SRSSDQVNEE HVVEEAVKIS EDQDLEDFVI IDQEQLLLLR EKYSILCLQY LGEYVEALGP VLHEKGVDVC LALLQRGIKD QEGCGHVSLL
0601: HEILRLICAL AAHRKFAALF VDRGGIQKIL SVPKITQTYT ALSACLFTFG SLQSTMERVC ALSPDTLNNV VELALQLLEC PQDAARKNAA IFFAAAFVFK
0701: AVLDSFDAQD GMQKLLNILQ VAASVRSGGN SGALGSSNAN QGNDRSPAEI LTQSEKQVAY HSCVALRQYF RAHLLQLVDS IRPSKSIRSI ARNTSSARAG
0801: YKPFDIGNEA MDAIFRQVQR DRKLGPALVR ARWPVMDKFL ASNGHIILLE LCQSLPADRY LHDLAQYAFG VLHIITLMPH SRKLMVHATL TNNRIGMAVI
0901: LDIANSVVGY VDPEVICPAL NVLVNLVCPP PSISNKPSSA VNQQPAGSYS ESRDRNAEKS TSERNVAANQ SESRERYGDG TPVVSSGVVG DKRISLGVGA
1001: GGPGLAAQLE QAYRQAREVV RANNGIKILL QLLGTRMVTH PLAIDPIRAL ACRVLLGLAR DDAIAHILTK LQVGKKLSEL IRDTSTQSSG GDNARWLNEL
1101: TQVAIELIAV LTNSGKETTL ATDAAAPALK RIERAGIAAA TPVSYHSREL MQLIHEHLVG SGLAATAAML QKEADLAPLP STAAVLPVHQ PAALEPSSVQ
1201: VQQQWPSGRV QGFLSDKTMI AADQAGQRSD SVVPSSKKKA LVFSSSFSKR NQPFVSFSGN RASNSLKSPV PAGNVDGMTC SASAANTGDV ETSHKTPMPL
1301: PLKRKLADME FSSASAAKRP AIMDQASQSP VFQTPAPTRR GLSVAVDSPT AAFHPGRTNF NNISTENFED SQCTPGVVTG TPHLGVNDQQ PGTSERMTLD
1401: SLVVQYLKHQ HRQCPAPITT LPPVSLLHPH VCPEPSRSIS APANVTARMG SREINREFSG IKVPRRDRQF IYSRFKPCRV CRDEASLLTC MTFIGGASRV
1501: AAGNHSGELR IFDSNLANLI ETHTCHQNLV TMVDSTSIGG TELILSSSID EVKLFDAFSL HTGPLHTFEN CKAARFNHAG TLFAGLSTDA NHRVVLLYDV
1601: QTHNVDMQLP DNSSLPGSGR GVQPIIHFSP SDDMLLWNGV LWDRRSPTPI HQFDQFTDYC GGGFHPAGNE VILNSEVWDL RKFKLLRSVP SLDQTVIKFN
1701: GSGDVIYAIL RRNLEDVTSS IQTRRVRHPL FPAFRTIDAV TYADIATVQI DRGVLDLATE PNDSLLGVVA MDDPDEMFSS ARIFEVGRKR PTDDDSDPED
1801: GGDTEDEDDD DDDSDVDVLL GTDLGLGDTD SEDDPSNSSG DDGGDDEDEE DMDSGDENDD DDEEGDFDVG GGLLEMMGGG DGDESGDMIE SFSSGEDEGW
1901: LM
0001: MDGQEHAEVP NSMVEDDQSV VAAEAIAELA NSTGEPNPEE GEEQSVEDEL IAKAQKLMED ITSVANNPNP NILHALSQLL ESQESLFLEE NGHFSNARGS
0101: HNSGKLCILI RENDEFFELI SSTFLSENSY STAVKAASAR LLMNCSLTWM YPHVFDDAVT ENFKNWVMEE AVKFPGEDSA KKEASDFEML KTYSTGLLAL
0201: SLASRGQIVE DVLTSGLSAK LMHYLRVRVL KEPSTSRIHT TETKHVSLKT KEEGRSRVRK IVDTVEGDHV LETDSGREMG QTDVQPDGEF EIDGRDVFNV
0301: SGVVDCKIKP GDDNSVRDDP SRHRLNRSKS RGRGRVHEGA PDTEVLLASP RLGRLLVRDR DLSKISDGRN AEDVTVCLGK MKSGIMEIER EDNDECFQGC
0401: IIGTKNITDL VKRAVGAAET EARAAHAPDD AAKAAGDAAA ELVKTAALEE FKSSGSEEAA VSAATRAAIT VIDAAEVSRN PTCVTSDQTT DVSEVSLPDI
0501: ESLAQLQEKY CIQCLEILGE YVEVLGPVLH EKGVDVCIVL LERTSQLDDR STVSPLLPDV MKLICALAAH RKFAAMFVER RGILKLLAVP RVSETFYGLS
0601: SCLYTIGSLQ GIMERVCALP LVVIHQVVKL AIELLDCSQD QARKNSALFF AAAFVFRAIL DAFDAQDSLQ KLLAILKDAA SVRTGANTDR SAPEVMTSSE
0701: KQMAFHTCFA LRQYFRAHLL LLVDSIRPSR ISRGGVPSSM KPNIRAAYKP LDISNEAVDA IFLQLQKDRR LGPTFVKAQW PAVNNFLASS GHVTMLELCQ
0801: TPPVDRYLHD LLQYAFGVLH IVTSIPDGRK AIAHATLSNN RAGIAVILDA ANISNSIVDP EIIQPALNVL INLVCPPPSL SNKPPLAQNH QPVPGQATTR
0901: PSTDVAVGTQ STGNAPQTPV APASSGLVGD RRIFLGAGTG SAGLAAKLEQ VYRQAREAVR GNDGIKILLK LLQPRIYVNP PATPDCLRAL ACRVLLGLAR
1001: DDTIAQILTK LEVGKSLSEL IRDSGGQSSG TDQGRWQAEL AQVALELIGI VTNSGHATTL TASDAATPTL RRIERAAIAA ATPITYDSKE LLLLIHEHLQ
1101: ASGLGDTASA LLKEAQLTPL PSSASPSSIA YSTTQEMSTP LAQEQWPSGR ANSGFFTSKP KVCAHDEDPN SRSNAALSAK KKHLASSTLE MPTPVAQQQW
1201: PSGRANCGFC PSIPKINARD EDPSSRGNAA PSAKKKQLTF SPSFSSQSRK QSFSHDALPQ STQRINCCSN SDPALADTSE TAAELVLKND LDADAQFKTP
1301: ISFPRKRKLS ELRDSSVPGK RIDLGERRNS TFADGSGLQT PASALDANQS GSSRLGQMTP ASQLRLPSDP QPSNPERLSL DSLVVQYLKH QHRQCLAPIT
1401: TLPPVSLLHP HVCPEPKRLL EAPLNMTGRL GTRELQSFYS GVHGNRRDRQ FVFSRFKSWR SFRDETALFT CIALLGGTNH IAVGSHAGEI KIFEASSGSM
1501: LESVSGHQAP VTLVQPYVSR DTQLLLSSSS SDVQLWDASS ITGGPRHSFD GCKAAKFSNS GLQFAALSCE ASRKDVLLYD VQTCSPCQKL TDTVTSSRSN
1601: PYSLVHFSPC DTLILWNGVL WDRRIPEKVR RFDQFTDYGG GGFHPSRNEV IINSEIWDMR TFKLLRSVPS LDQTAITFNS RGDVIYAMLR RNIEDVMSAV
1701: HTRRVKHPLF AAFRTLDAIN YSDIATIPVD RCLLDFATEP TDSFLGLITM EDQEDMFSSA RMYEIGRRRP TDDDSDPDDD DETEDEDEDD EEEDDLDRIL
1801: GLAGDNSDSG DDDLSSEDNE DSVSDFDEEA DILIDGDFME ELIEGENEDD GNGEDEDDDD DGEMQDFMSS GEEDDYRDNI RSS
0101: HNSGKLCILI RENDEFFELI SSTFLSENSY STAVKAASAR LLMNCSLTWM YPHVFDDAVT ENFKNWVMEE AVKFPGEDSA KKEASDFEML KTYSTGLLAL
0201: SLASRGQIVE DVLTSGLSAK LMHYLRVRVL KEPSTSRIHT TETKHVSLKT KEEGRSRVRK IVDTVEGDHV LETDSGREMG QTDVQPDGEF EIDGRDVFNV
0301: SGVVDCKIKP GDDNSVRDDP SRHRLNRSKS RGRGRVHEGA PDTEVLLASP RLGRLLVRDR DLSKISDGRN AEDVTVCLGK MKSGIMEIER EDNDECFQGC
0401: IIGTKNITDL VKRAVGAAET EARAAHAPDD AAKAAGDAAA ELVKTAALEE FKSSGSEEAA VSAATRAAIT VIDAAEVSRN PTCVTSDQTT DVSEVSLPDI
0501: ESLAQLQEKY CIQCLEILGE YVEVLGPVLH EKGVDVCIVL LERTSQLDDR STVSPLLPDV MKLICALAAH RKFAAMFVER RGILKLLAVP RVSETFYGLS
0601: SCLYTIGSLQ GIMERVCALP LVVIHQVVKL AIELLDCSQD QARKNSALFF AAAFVFRAIL DAFDAQDSLQ KLLAILKDAA SVRTGANTDR SAPEVMTSSE
0701: KQMAFHTCFA LRQYFRAHLL LLVDSIRPSR ISRGGVPSSM KPNIRAAYKP LDISNEAVDA IFLQLQKDRR LGPTFVKAQW PAVNNFLASS GHVTMLELCQ
0801: TPPVDRYLHD LLQYAFGVLH IVTSIPDGRK AIAHATLSNN RAGIAVILDA ANISNSIVDP EIIQPALNVL INLVCPPPSL SNKPPLAQNH QPVPGQATTR
0901: PSTDVAVGTQ STGNAPQTPV APASSGLVGD RRIFLGAGTG SAGLAAKLEQ VYRQAREAVR GNDGIKILLK LLQPRIYVNP PATPDCLRAL ACRVLLGLAR
1001: DDTIAQILTK LEVGKSLSEL IRDSGGQSSG TDQGRWQAEL AQVALELIGI VTNSGHATTL TASDAATPTL RRIERAAIAA ATPITYDSKE LLLLIHEHLQ
1101: ASGLGDTASA LLKEAQLTPL PSSASPSSIA YSTTQEMSTP LAQEQWPSGR ANSGFFTSKP KVCAHDEDPN SRSNAALSAK KKHLASSTLE MPTPVAQQQW
1201: PSGRANCGFC PSIPKINARD EDPSSRGNAA PSAKKKQLTF SPSFSSQSRK QSFSHDALPQ STQRINCCSN SDPALADTSE TAAELVLKND LDADAQFKTP
1301: ISFPRKRKLS ELRDSSVPGK RIDLGERRNS TFADGSGLQT PASALDANQS GSSRLGQMTP ASQLRLPSDP QPSNPERLSL DSLVVQYLKH QHRQCLAPIT
1401: TLPPVSLLHP HVCPEPKRLL EAPLNMTGRL GTRELQSFYS GVHGNRRDRQ FVFSRFKSWR SFRDETALFT CIALLGGTNH IAVGSHAGEI KIFEASSGSM
1501: LESVSGHQAP VTLVQPYVSR DTQLLLSSSS SDVQLWDASS ITGGPRHSFD GCKAAKFSNS GLQFAALSCE ASRKDVLLYD VQTCSPCQKL TDTVTSSRSN
1601: PYSLVHFSPC DTLILWNGVL WDRRIPEKVR RFDQFTDYGG GGFHPSRNEV IINSEIWDMR TFKLLRSVPS LDQTAITFNS RGDVIYAMLR RNIEDVMSAV
1701: HTRRVKHPLF AAFRTLDAIN YSDIATIPVD RCLLDFATEP TDSFLGLITM EDQEDMFSSA RMYEIGRRRP TDDDSDPDDD DETEDEDEDD EEEDDLDRIL
1801: GLAGDNSDSG DDDLSSEDNE DSVSDFDEEA DILIDGDFME ELIEGENEDD GNGEDEDDDD DGEMQDFMSS GEEDDYRDNI RSS
Arabidopsis Description
DCAF1DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M086]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.