Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra017569.1-P | |
| Bra022023.1-P | |
| Bra025031.1-P | |
| Bra029577.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G31160.1 | Bra029577.1-P | AT4G05420.1 | 18552200 |
| AT4G31160.1 | Bra017569.1-P | AT5G46210.1 | 18552200 |
| AT4G31160.1 | Bra022023.1-P | AT5G46210.1 | 18552200 |
| AT4G31160.1 | Bra025031.1-P | AT5G46210.1 | 18552200 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13413 | Canola | nucleus | 92.39 | 95.14 |
| Bra010248.1-P | Field mustard | nucleus | 83.17 | 78.58 |
| AT4G31160.1 | Thale cress | cytosol, nucleus, plasma membrane | 80.33 | 76.79 |
| CDY03208 | Canola | nucleus | 6.94 | 64.43 |
| KRH52554 | Soybean | nucleus | 58.44 | 54.71 |
| VIT_04s0008g03060.t01 | Wine grape | cytosol, nucleus, plasma membrane | 58.5 | 53.53 |
| KRH61892 | Soybean | cytosol | 57.56 | 53.37 |
| Solyc08g074370.2.1 | Tomato | nucleus | 54.67 | 52.31 |
| GSMUA_Achr3P22370_001 | Banana | cytosol | 46.17 | 50.0 |
| KRH16085 | Soybean | cytosol | 19.78 | 49.72 |
| GSMUA_Achr7P23160_001 | Banana | plasma membrane, plastid, vacuole | 46.17 | 48.54 |
| Os04t0691200-00 | Rice | cytosol | 16.78 | 47.71 |
| TraesCS2B01G630100.1 | Wheat | nucleus | 39.44 | 46.71 |
| EES13157 | Sorghum | cytosol | 46.67 | 43.84 |
| HORVU2Hr1G126010.3 | Barley | cytosol | 44.78 | 43.59 |
| Zm00001d026691_P004 | Maize | cytosol | 46.06 | 43.29 |
| Zm00001d002933_P014 | Maize | cytosol | 45.67 | 43.22 |
| TraesCS2A01G566600.1 | Wheat | nucleus | 45.44 | 43.01 |
| TraesCS2D01G576800.1 | Wheat | cytosol | 45.33 | 42.9 |
| VIT_15s0021g02350.t01 | Wine grape | nucleus | 7.06 | 36.92 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:35.1 | EnsemblPlantsGene:Bra024021 | EnsemblPlants:Bra024021.1 | EnsemblPlants:Bra024021.1-P | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016567 | GO:GO:0019538 | InterPro:IPR001680 | InterPro:IPR006594 | InterPro:IPR015943 |
| InterPro:IPR017986 | InterPro:LisH | UniProt:M4E5G7 | PFAM:PF08513 | PFscan:PS50294 | PFscan:PS50896 |
| SMART:SM00320 | SMART:SM00667 | SUPFAM:SSF50978 | UniParc:UPI0002540F06 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat |
| InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : | : | : |
Description
AT4G31160 (E=0.0) DCAF1 | DCAF1 (DDB1-CUL4 ASSOCIATED FACTOR 1); nucleotide binding
Coordinates
chrA03:+:28178697..28185675
Molecular Weight (calculated)
195172.0 Da
IEP (calculated)
6.109
GRAVY (calculated)
-0.245
Length
1800 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDEQGDDAEV RNPTAVTAET ENSIGGPDHE EGQQEEDDEV TAIAAEVAAE QKEEDELIEK AQKLMDSITA GANNPNPTIL HALSHLLESK ESLFVKVSEF
0101: YSNDRSNHIS GNLCNLIREN DEFFELISSN FLTEDTYSTA VKAASVRLLV NCSLTSMYPY VFDDAVMDKF KNWVLDESVK FPGEHSGSKE ASDAEMLKTY
0201: STGLLAISLT SRGQLVEDVL ASGLSAKLMH YLRVRVIGDS STSRRDALHA TEAKHVSLKG KEEGRGRVRR VVDTVEGDHV LDADSGREMG QSEGEFEIDG
0301: NVSAVVDCKL KPGDDNTGRD DPSRQRMNRS KSRGRGKVNE GATDTDVLLT SPRSIRLGVR DRDLPKNSDV RNAEDVTLCL GKMKSGIVGI ERDENDECFQ
0401: GCWVGTKNIT DLVKRAIGAA ETEARAAHAP DDAAKAAGDA AAELEFKSSG SEEAAVSAAV RAATTVIDAA EVSRNPTCVI SDQTAELNSV ETDAIADVGE
0501: VSLPDIKSLA QLQEKYCIQC LEILGEYVEV LGPVLHEKGV DVCITLLERT SQLEDSFALS PLLPDVMKLI CALAAHRKFA AMFVDRGGLQ KLLAVPRVTE
0601: TFYGLSSCLY TIGSLQGIME RVCALPSDLI HQLVKLAIEL LDCSQDQARK NAALFFAAAF VFRAILDAFD AHNSLQKLLA ILKDAASVRT GANSDRSAPE
0701: VMTSSEKQMA FHTCFALRQY FRAHLLLLVD SIRPSRSGRG GVRNVSNVRA AYKPLDISNE AVDAVFHQLH KDRKLGPTFV RTQWPAVNNF LASSGHVTML
0801: ELCQTPPVDR YLHDLLQHAF GVLHIVTSIP DGRKAIVSAT LSNNRAGIAV VLDAANISNS IVDPEIIQPA LNVLINLVCP PPSLSNKPPL AQNHQPVSGQ
0901: ATARPSTDAA ADTQSTGNAP PTPVAPASSG LVGDRRIFLG AGTGSAGLAA KLEQVYRLAR EAVRGNDGIK ILLKLLQPRI YVNPPAAPDC LRALACRVLL
1001: GLARDDTIAQ ILTKLEVGKS LSELIRDAGG QSSGTDQVRW QAELAQVALE LIGILTNSGH ANTLTASDAT TPTLRRIERA AIAAATPITY DSKELLLLIH
1101: EHLQASGLGE TASALLKETQ LSPLPSLAPP SSVAFSATQE MSAPVVQEQW PSGRANGGFF TSKPKVCAHD EDPNSRCNAA ISAKKKHLAS STHETSSTPV
1201: AQQQWPSGRA SGGFFPSKLK VNTHEEDPSL IGNAAPSAKK KQLTFSPSFS LQPRNQTFPQ DAHPQSTQRI DSSSHSDPAC ADTSDTAAKL VLKSDIDADS
1301: QFKTPTFPRK RKLSELKDTD VSVSGKRINL GELGPPSPAC RTTASFRRSS TIADASGFQT PASALDVNQS GSSRLGLMTP ASQLRLPSDP QPSNTERLTL
1401: DSLVVQYLKH QHRQCLAPIT TVPPVSLLHP HVCPEPKRLL EAPLNITGRL GTREVQSFYS GVHGSRRDRQ FVFSRFKSWR SYRDENALFT CISLLGGTNH
1501: LAVGSHAGEI KIFDASSCSL LESFSGHQAP VTLVQPYVSG DTQLLLSSSS SDVQLWDASY ITNGSKHSLD GCKAAKFSNS GRYFAALSCE GSKDVLLYNV
1601: ETCTISHKYT DTSTSSRSSP YSLVHFSPCD TLILWNGHLW DRRVPDEVSR FDQFTDYGGG GFHPSRNEVI INSEVWDLRK MRLLRSVPSL DQTAITFNSR
1701: GDVIYAMLRR NIEDVMSAVH TRRSKHPLFA AFRTLDAVNY SDIATIPVDR CLLDFATEPT DSFLGLITME DQDDMLSSAS VSRMDLLPKV LLTSNFVFFF
0101: YSNDRSNHIS GNLCNLIREN DEFFELISSN FLTEDTYSTA VKAASVRLLV NCSLTSMYPY VFDDAVMDKF KNWVLDESVK FPGEHSGSKE ASDAEMLKTY
0201: STGLLAISLT SRGQLVEDVL ASGLSAKLMH YLRVRVIGDS STSRRDALHA TEAKHVSLKG KEEGRGRVRR VVDTVEGDHV LDADSGREMG QSEGEFEIDG
0301: NVSAVVDCKL KPGDDNTGRD DPSRQRMNRS KSRGRGKVNE GATDTDVLLT SPRSIRLGVR DRDLPKNSDV RNAEDVTLCL GKMKSGIVGI ERDENDECFQ
0401: GCWVGTKNIT DLVKRAIGAA ETEARAAHAP DDAAKAAGDA AAELEFKSSG SEEAAVSAAV RAATTVIDAA EVSRNPTCVI SDQTAELNSV ETDAIADVGE
0501: VSLPDIKSLA QLQEKYCIQC LEILGEYVEV LGPVLHEKGV DVCITLLERT SQLEDSFALS PLLPDVMKLI CALAAHRKFA AMFVDRGGLQ KLLAVPRVTE
0601: TFYGLSSCLY TIGSLQGIME RVCALPSDLI HQLVKLAIEL LDCSQDQARK NAALFFAAAF VFRAILDAFD AHNSLQKLLA ILKDAASVRT GANSDRSAPE
0701: VMTSSEKQMA FHTCFALRQY FRAHLLLLVD SIRPSRSGRG GVRNVSNVRA AYKPLDISNE AVDAVFHQLH KDRKLGPTFV RTQWPAVNNF LASSGHVTML
0801: ELCQTPPVDR YLHDLLQHAF GVLHIVTSIP DGRKAIVSAT LSNNRAGIAV VLDAANISNS IVDPEIIQPA LNVLINLVCP PPSLSNKPPL AQNHQPVSGQ
0901: ATARPSTDAA ADTQSTGNAP PTPVAPASSG LVGDRRIFLG AGTGSAGLAA KLEQVYRLAR EAVRGNDGIK ILLKLLQPRI YVNPPAAPDC LRALACRVLL
1001: GLARDDTIAQ ILTKLEVGKS LSELIRDAGG QSSGTDQVRW QAELAQVALE LIGILTNSGH ANTLTASDAT TPTLRRIERA AIAAATPITY DSKELLLLIH
1101: EHLQASGLGE TASALLKETQ LSPLPSLAPP SSVAFSATQE MSAPVVQEQW PSGRANGGFF TSKPKVCAHD EDPNSRCNAA ISAKKKHLAS STHETSSTPV
1201: AQQQWPSGRA SGGFFPSKLK VNTHEEDPSL IGNAAPSAKK KQLTFSPSFS LQPRNQTFPQ DAHPQSTQRI DSSSHSDPAC ADTSDTAAKL VLKSDIDADS
1301: QFKTPTFPRK RKLSELKDTD VSVSGKRINL GELGPPSPAC RTTASFRRSS TIADASGFQT PASALDVNQS GSSRLGLMTP ASQLRLPSDP QPSNTERLTL
1401: DSLVVQYLKH QHRQCLAPIT TVPPVSLLHP HVCPEPKRLL EAPLNITGRL GTREVQSFYS GVHGSRRDRQ FVFSRFKSWR SYRDENALFT CISLLGGTNH
1501: LAVGSHAGEI KIFDASSCSL LESFSGHQAP VTLVQPYVSG DTQLLLSSSS SDVQLWDASY ITNGSKHSLD GCKAAKFSNS GRYFAALSCE GSKDVLLYNV
1601: ETCTISHKYT DTSTSSRSSP YSLVHFSPCD TLILWNGHLW DRRVPDEVSR FDQFTDYGGG GFHPSRNEVI INSEVWDLRK MRLLRSVPSL DQTAITFNSR
1701: GDVIYAMLRR NIEDVMSAVH TRRSKHPLFA AFRTLDAVNY SDIATIPVDR CLLDFATEPT DSFLGLITME DQDDMLSSAS VSRMDLLPKV LLTSNFVFFF
0001: MDGQEHAEVP NSMVEDDQSV VAAEAIAELA NSTGEPNPEE GEEQSVEDEL IAKAQKLMED ITSVANNPNP NILHALSQLL ESQESLFLEE NGHFSNARGS
0101: HNSGKLCILI RENDEFFELI SSTFLSENSY STAVKAASAR LLMNCSLTWM YPHVFDDAVT ENFKNWVMEE AVKFPGEDSA KKEASDFEML KTYSTGLLAL
0201: SLASRGQIVE DVLTSGLSAK LMHYLRVRVL KEPSTSRIHT TETKHVSLKT KEEGRSRVRK IVDTVEGDHV LETDSGREMG QTDVQPDGEF EIDGRDVFNV
0301: SGVVDCKIKP GDDNSVRDDP SRHRLNRSKS RGRGRVHEGA PDTEVLLASP RLGRLLVRDR DLSKISDGRN AEDVTVCLGK MKSGIMEIER EDNDECFQGC
0401: IIGTKNITDL VKRAVGAAET EARAAHAPDD AAKAAGDAAA ELVKTAALEE FKSSGSEEAA VSAATRAAIT VIDAAEVSRN PTCVTSDQTT DVSEVSLPDI
0501: ESLAQLQEKY CIQCLEILGE YVEVLGPVLH EKGVDVCIVL LERTSQLDDR STVSPLLPDV MKLICALAAH RKFAAMFVER RGILKLLAVP RVSETFYGLS
0601: SCLYTIGSLQ GIMERVCALP LVVIHQVVKL AIELLDCSQD QARKNSALFF AAAFVFRAIL DAFDAQDSLQ KLLAILKDAA SVRTGANTDR SAPEVMTSSE
0701: KQMAFHTCFA LRQYFRAHLL LLVDSIRPSR ISRGGVPSSM KPNIRAAYKP LDISNEAVDA IFLQLQKDRR LGPTFVKAQW PAVNNFLASS GHVTMLELCQ
0801: TPPVDRYLHD LLQYAFGVLH IVTSIPDGRK AIAHATLSNN RAGIAVILDA ANISNSIVDP EIIQPALNVL INLVCPPPSL SNKPPLAQNH QPVPGQATTR
0901: PSTDVAVGTQ STGNAPQTPV APASSGLVGD RRIFLGAGTG SAGLAAKLEQ VYRQAREAVR GNDGIKILLK LLQPRIYVNP PATPDCLRAL ACRVLLGLAR
1001: DDTIAQILTK LEVGKSLSEL IRDSGGQSSG TDQGRWQAEL AQVALELIGI VTNSGHATTL TASDAATPTL RRIERAAIAA ATPITYDSKE LLLLIHEHLQ
1101: ASGLGDTASA LLKEAQLTPL PSSASPSSIA YSTTQEMSTP LAQEQWPSGR ANSGFFTSKP KVCAHDEDPN SRSNAALSAK KKHLASSTLE MPTPVAQQQW
1201: PSGRANCGFC PSIPKINARD EDPSSRGNAA PSAKKKQLTF SPSFSSQSRK QSFSHDALPQ STQRINCCSN SDPALADTSE TAAELVLKND LDADAQFKTP
1301: ISFPRKRKLS ELRDSSVPGK RIDLGERRNS TFADGSGLQT PASALDANQS GSSRLGQMTP ASQLRLPSDP QPSNPERLSL DSLVVQYLKH QHRQCLAPIT
1401: TLPPVSLLHP HVCPEPKRLL EAPLNMTGRL GTRELQSFYS GVHGNRRDRQ FVFSRFKSWR SFRDETALFT CIALLGGTNH IAVGSHAGEI KIFEASSGSM
1501: LESVSGHQAP VTLVQPYVSR DTQLLLSSSS SDVQLWDASS ITGGPRHSFD GCKAAKFSNS GLQFAALSCE ASRKDVLLYD VQTCSPCQKL TDTVTSSRSN
1601: PYSLVHFSPC DTLILWNGVL WDRRIPEKVR RFDQFTDYGG GGFHPSRNEV IINSEIWDMR TFKLLRSVPS LDQTAITFNS RGDVIYAMLR RNIEDVMSAV
1701: HTRRVKHPLF AAFRTLDAIN YSDIATIPVD RCLLDFATEP TDSFLGLITM EDQEDMFSSA RMYEIGRRRP TDDDSDPDDD DETEDEDEDD EEEDDLDRIL
1801: GLAGDNSDSG DDDLSSEDNE DSVSDFDEEA DILIDGDFME ELIEGENEDD GNGEDEDDDD DGEMQDFMSS GEEDDYRDNI RSS
0101: HNSGKLCILI RENDEFFELI SSTFLSENSY STAVKAASAR LLMNCSLTWM YPHVFDDAVT ENFKNWVMEE AVKFPGEDSA KKEASDFEML KTYSTGLLAL
0201: SLASRGQIVE DVLTSGLSAK LMHYLRVRVL KEPSTSRIHT TETKHVSLKT KEEGRSRVRK IVDTVEGDHV LETDSGREMG QTDVQPDGEF EIDGRDVFNV
0301: SGVVDCKIKP GDDNSVRDDP SRHRLNRSKS RGRGRVHEGA PDTEVLLASP RLGRLLVRDR DLSKISDGRN AEDVTVCLGK MKSGIMEIER EDNDECFQGC
0401: IIGTKNITDL VKRAVGAAET EARAAHAPDD AAKAAGDAAA ELVKTAALEE FKSSGSEEAA VSAATRAAIT VIDAAEVSRN PTCVTSDQTT DVSEVSLPDI
0501: ESLAQLQEKY CIQCLEILGE YVEVLGPVLH EKGVDVCIVL LERTSQLDDR STVSPLLPDV MKLICALAAH RKFAAMFVER RGILKLLAVP RVSETFYGLS
0601: SCLYTIGSLQ GIMERVCALP LVVIHQVVKL AIELLDCSQD QARKNSALFF AAAFVFRAIL DAFDAQDSLQ KLLAILKDAA SVRTGANTDR SAPEVMTSSE
0701: KQMAFHTCFA LRQYFRAHLL LLVDSIRPSR ISRGGVPSSM KPNIRAAYKP LDISNEAVDA IFLQLQKDRR LGPTFVKAQW PAVNNFLASS GHVTMLELCQ
0801: TPPVDRYLHD LLQYAFGVLH IVTSIPDGRK AIAHATLSNN RAGIAVILDA ANISNSIVDP EIIQPALNVL INLVCPPPSL SNKPPLAQNH QPVPGQATTR
0901: PSTDVAVGTQ STGNAPQTPV APASSGLVGD RRIFLGAGTG SAGLAAKLEQ VYRQAREAVR GNDGIKILLK LLQPRIYVNP PATPDCLRAL ACRVLLGLAR
1001: DDTIAQILTK LEVGKSLSEL IRDSGGQSSG TDQGRWQAEL AQVALELIGI VTNSGHATTL TASDAATPTL RRIERAAIAA ATPITYDSKE LLLLIHEHLQ
1101: ASGLGDTASA LLKEAQLTPL PSSASPSSIA YSTTQEMSTP LAQEQWPSGR ANSGFFTSKP KVCAHDEDPN SRSNAALSAK KKHLASSTLE MPTPVAQQQW
1201: PSGRANCGFC PSIPKINARD EDPSSRGNAA PSAKKKQLTF SPSFSSQSRK QSFSHDALPQ STQRINCCSN SDPALADTSE TAAELVLKND LDADAQFKTP
1301: ISFPRKRKLS ELRDSSVPGK RIDLGERRNS TFADGSGLQT PASALDANQS GSSRLGQMTP ASQLRLPSDP QPSNPERLSL DSLVVQYLKH QHRQCLAPIT
1401: TLPPVSLLHP HVCPEPKRLL EAPLNMTGRL GTRELQSFYS GVHGNRRDRQ FVFSRFKSWR SFRDETALFT CIALLGGTNH IAVGSHAGEI KIFEASSGSM
1501: LESVSGHQAP VTLVQPYVSR DTQLLLSSSS SDVQLWDASS ITGGPRHSFD GCKAAKFSNS GLQFAALSCE ASRKDVLLYD VQTCSPCQKL TDTVTSSRSN
1601: PYSLVHFSPC DTLILWNGVL WDRRIPEKVR RFDQFTDYGG GGFHPSRNEV IINSEIWDMR TFKLLRSVPS LDQTAITFNS RGDVIYAMLR RNIEDVMSAV
1701: HTRRVKHPLF AAFRTLDAIN YSDIATIPVD RCLLDFATEP TDSFLGLITM EDQEDMFSSA RMYEIGRRRP TDDDSDPDDD DETEDEDEDD EEEDDLDRIL
1801: GLAGDNSDSG DDDLSSEDNE DSVSDFDEEA DILIDGDFME ELIEGENEDD GNGEDEDDDD DGEMQDFMSS GEEDDYRDNI RSS
Arabidopsis Description
DCAF1DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M086]
SUBAcon: [cytosol,nucleus,plasma membrane]
SUBAcon: [cytosol,nucleus,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.