Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024021.1-P | Field mustard | nucleus | 95.14 | 92.39 |
| CDX72295 | Canola | cytosol, nucleus, plastid | 92.28 | 92.01 |
| CDY03208 | Canola | nucleus | 9.61 | 86.6 |
| CDY23283 | Canola | nucleus | 83.3 | 78.87 |
| CDY36454 | Canola | nucleus | 82.95 | 78.85 |
| AT4G31160.1 | Thale cress | cytosol, nucleus, plasma membrane | 80.66 | 74.88 |
| KRH52554 | Soybean | nucleus | 60.01 | 54.55 |
| KRH61892 | Soybean | cytosol | 59.32 | 53.43 |
| VIT_04s0008g03060.t01 | Wine grape | cytosol, nucleus, plasma membrane | 60.01 | 53.33 |
| Solyc08g074370.2.1 | Tomato | nucleus | 56.52 | 52.53 |
| GSMUA_Achr3P22370_001 | Banana | cytosol | 48.11 | 50.6 |
| KRH16085 | Soybean | cytosol | 20.42 | 49.86 |
| GSMUA_Achr7P23160_001 | Banana | plasma membrane, plastid, vacuole | 47.65 | 48.66 |
| Os04t0691200-00 | Rice | cytosol | 17.16 | 47.39 |
| TraesCS2B01G630100.1 | Wheat | nucleus | 40.85 | 46.97 |
| EES13157 | Sorghum | cytosol | 48.23 | 44.0 |
| HORVU2Hr1G126010.3 | Barley | cytosol | 46.4 | 43.86 |
| Zm00001d026691_P004 | Maize | cytosol | 47.65 | 43.5 |
| Zm00001d002933_P014 | Maize | cytosol | 47.2 | 43.38 |
| TraesCS2A01G566600.1 | Wheat | nucleus | 46.97 | 43.17 |
| TraesCS2D01G576800.1 | Wheat | cytosol | 46.85 | 43.06 |
| VIT_15s0021g02350.t01 | Wine grape | nucleus | 6.69 | 34.01 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:35.1 | UniProt:A0A078FM55 | EnsemblPlants:CDY13413 | ProteinID:CDY13413 | ProteinID:CDY13413.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00077691001 | InterPro:IPR001680 |
| InterPro:IPR006594 | InterPro:IPR015943 | InterPro:IPR017986 | InterPro:LisH | PFAM:PF08513 | PFscan:PS50294 |
| PFscan:PS50896 | PANTHER:PTHR13129 | SMART:SM00320 | SMART:SM00667 | SUPFAM:SSF50978 | UniPathway:UPA00143 |
| UniParc:UPI0004EEC9A8 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg |
Description
BnaA03g51310DBnaA03g51310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FM55]
Coordinates
chrLK032035:+:152760..159791
Molecular Weight (calculated)
189735.0 Da
IEP (calculated)
6.040
GRAVY (calculated)
-0.208
Length
1748 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDDAEVRNPT AVTAETENSI GGPDHEEGQQ EEDDEVTAIA AEVASEQKEE DELIEKAQKL MDSITAGANN PNPTILHALS HILESKESLF IKVSEFYSND
0101: RSNHISGNLC NLIRENDEFF ELISSNFLTE DTYSTAVKAA SVRLLVNCSL TSMYPYVFDD AVMDKFKNWV LDESVKFPGE HSGSKEASDA EMLKTYSTGL
0201: LAISLTSRGQ LVEDVLASGL SAKLMHYLRV RVIGDSSTSR REALHATEAK HVSLKGKEEG RGRVRRVVDT VEGDHVLDAD SGREMGQSEG EFEIDGNVSA
0301: VVDCKLKPGD DNTGRDDPSR QRMNRSKSRG RGKVNEGATD TDVLLTSPRS SRLGVRDRDL PKNSDVRNAE DVTLCLGKMK SGIVGIERDE NDECFQGCWI
0401: GTKNITDLVK RAIGAAETEA RAAHAPDDAA KAAGDAAAEL VKTAALEACF YFEFKSSGSE EAAVSAAVRA ATTVIDAAEV SRNPTCVISD QTAELNSVET
0501: DAIADVGEVS LPDIKSLAQL QEKYCIQCLE ILGEYVEVLG PVLHEKGVDV CITLLERTSQ LEDSFALSPL LPDVMKLICA LAAHRKFAAM FVDRGGLQKL
0601: LAVPRVTETF YGLSSCLYTI GSLQGIMERV CALPSDLIHQ LVKLAIELLD CSQDQARKNA ALFFAAAFVF RAILDAFDAH NSLQKLLAIL KDAASVRTGA
0701: NSDRSAPEVM TSSEKQMAFH TCFALRQYFR AHLLLLVDSI RPSRSGRGGV RNVSNVRAAY KPLDISNEAV DAVFHQLHKD RKLGPTFVRT QWPAVNNFLA
0801: SSGHVTMLEL CQTPPVDRYL HDLLQHAFGV LHIVTSIPDG RKAIVSATLS NNRAGIAVVL DAANISNSIV DPEIIQPALN VLINLVCPPP SLSNKPPLAQ
0901: NHQPVSGQAT ARPSTDAAAD TQSTGNAPPT PVAPASSGLV GDRRIFLGAG TGSAGLAAKL EQVYRLAREA VRGNDGIKIL LKLLQPRIYV NPPAAPDCLR
1001: ALACRVLLGL ARDDTIAQIL TKLEVGKSLS ELIRDAGGQS SGTDQVRWQA ELAQVALELI GILTNSGHAN TLTASDATTP TLRRIERAAI AAATPITYDS
1101: KELLLLIHEH LQASGLGETA SALLKETQLS PLPSLAPPSS VAFSATQEMS APVVQEQWPS GRANGGFFTS KPKVCAHDED PNSRCNAAIS AKKKHLASST
1201: HETSSTPDAH PQSTQRIDSS SHSDPACADT SDTAAKLVLK SDIDADSQFK TPTFPRKRKL SELKDTDVSV SGKRINLGEL GPPSPACRTT ASFRRSSTIA
1301: DASGFQTPAS ALDVNQSGSS RLGLMTPASQ LRLPSDPQPS NTERLTLDSL VVQYLKHQHR QCLAPITTVP PVSLLHPHVC PEPKRLLEAP LNITGRLGTR
1401: EVQSFYSGVH GSRRDRQFVF SRFKSWRSYR DENALFTCIS LLGGTNHLAV GSHAGEIKIF DASSCSLLES FSGHQAPVTL VQPYVSGDTQ LLLSSSSSDV
1501: QLWDASYITN GSKHSLDGCK AAKFSNSGRY FAALSCEGST KDVLLYNVET CTLSHKYTDT STSSRSSPYS LVHFSPCDTL ILWNGHLWDR RVPDEVSRFD
1601: QFTDYGGGGF HPSRNEVIIN SEVWDLRKMR LLRSVPSLDQ TAITFNSRGD VIYAMLRRNI EDVMSAVHTR RSKHPLFAAF RTLDAVNYSD IATIPVDRCL
1701: LDFATEPTDS FLGLITMEDQ DDMLSSARFV FFFLLPKVLL TSNFVFFF
0101: RSNHISGNLC NLIRENDEFF ELISSNFLTE DTYSTAVKAA SVRLLVNCSL TSMYPYVFDD AVMDKFKNWV LDESVKFPGE HSGSKEASDA EMLKTYSTGL
0201: LAISLTSRGQ LVEDVLASGL SAKLMHYLRV RVIGDSSTSR REALHATEAK HVSLKGKEEG RGRVRRVVDT VEGDHVLDAD SGREMGQSEG EFEIDGNVSA
0301: VVDCKLKPGD DNTGRDDPSR QRMNRSKSRG RGKVNEGATD TDVLLTSPRS SRLGVRDRDL PKNSDVRNAE DVTLCLGKMK SGIVGIERDE NDECFQGCWI
0401: GTKNITDLVK RAIGAAETEA RAAHAPDDAA KAAGDAAAEL VKTAALEACF YFEFKSSGSE EAAVSAAVRA ATTVIDAAEV SRNPTCVISD QTAELNSVET
0501: DAIADVGEVS LPDIKSLAQL QEKYCIQCLE ILGEYVEVLG PVLHEKGVDV CITLLERTSQ LEDSFALSPL LPDVMKLICA LAAHRKFAAM FVDRGGLQKL
0601: LAVPRVTETF YGLSSCLYTI GSLQGIMERV CALPSDLIHQ LVKLAIELLD CSQDQARKNA ALFFAAAFVF RAILDAFDAH NSLQKLLAIL KDAASVRTGA
0701: NSDRSAPEVM TSSEKQMAFH TCFALRQYFR AHLLLLVDSI RPSRSGRGGV RNVSNVRAAY KPLDISNEAV DAVFHQLHKD RKLGPTFVRT QWPAVNNFLA
0801: SSGHVTMLEL CQTPPVDRYL HDLLQHAFGV LHIVTSIPDG RKAIVSATLS NNRAGIAVVL DAANISNSIV DPEIIQPALN VLINLVCPPP SLSNKPPLAQ
0901: NHQPVSGQAT ARPSTDAAAD TQSTGNAPPT PVAPASSGLV GDRRIFLGAG TGSAGLAAKL EQVYRLAREA VRGNDGIKIL LKLLQPRIYV NPPAAPDCLR
1001: ALACRVLLGL ARDDTIAQIL TKLEVGKSLS ELIRDAGGQS SGTDQVRWQA ELAQVALELI GILTNSGHAN TLTASDATTP TLRRIERAAI AAATPITYDS
1101: KELLLLIHEH LQASGLGETA SALLKETQLS PLPSLAPPSS VAFSATQEMS APVVQEQWPS GRANGGFFTS KPKVCAHDED PNSRCNAAIS AKKKHLASST
1201: HETSSTPDAH PQSTQRIDSS SHSDPACADT SDTAAKLVLK SDIDADSQFK TPTFPRKRKL SELKDTDVSV SGKRINLGEL GPPSPACRTT ASFRRSSTIA
1301: DASGFQTPAS ALDVNQSGSS RLGLMTPASQ LRLPSDPQPS NTERLTLDSL VVQYLKHQHR QCLAPITTVP PVSLLHPHVC PEPKRLLEAP LNITGRLGTR
1401: EVQSFYSGVH GSRRDRQFVF SRFKSWRSYR DENALFTCIS LLGGTNHLAV GSHAGEIKIF DASSCSLLES FSGHQAPVTL VQPYVSGDTQ LLLSSSSSDV
1501: QLWDASYITN GSKHSLDGCK AAKFSNSGRY FAALSCEGST KDVLLYNVET CTLSHKYTDT STSSRSSPYS LVHFSPCDTL ILWNGHLWDR RVPDEVSRFD
1601: QFTDYGGGGF HPSRNEVIIN SEVWDLRKMR LLRSVPSLDQ TAITFNSRGD VIYAMLRRNI EDVMSAVHTR RSKHPLFAAF RTLDAVNYSD IATIPVDRCL
1701: LDFATEPTDS FLGLITMEDQ DDMLSSARFV FFFLLPKVLL TSNFVFFF
0001: MDGQEHAEVP NSMVEDDQSV VAAEAIAELA NSTGEPNPEE GEEQSVEDEL IAKAQKLMED ITSVANNPNP NILHALSQLL ESQESLFLEE NGHFSNARGS
0101: HNSGKLCILI RENDEFFELI SSTFLSENSY STAVKAASAR LLMNCSLTWM YPHVFDDAVT ENFKNWVMEE AVKFPGEDSA KKEASDFEML KTYSTGLLAL
0201: SLASRGQIVE DVLTSGLSAK LMHYLRVRVL KEPSTSRIHT TETKHVSLKT KEEGRSRVRK IVDTVEGDHV LETDSGREMG QTDVQPDGEF EIDGRDVFNV
0301: SGVVDCKIKP GDDNSVRDDP SRHRLNRSKS RGRGRVHEGA PDTEVLLASP RLGRLLVRDR DLSKISDGRN AEDVTVCLGK MKSGIMEIER EDNDECFQGC
0401: IIGTKNITDL VKRAVGAAET EARAAHAPDD AAKAAGDAAA ELVKTAALEE FKSSGSEEAA VSAATRAAIT VIDAAEVSRN PTCVTSDQTT DVSEVSLPDI
0501: ESLAQLQEKY CIQCLEILGE YVEVLGPVLH EKGVDVCIVL LERTSQLDDR STVSPLLPDV MKLICALAAH RKFAAMFVER RGILKLLAVP RVSETFYGLS
0601: SCLYTIGSLQ GIMERVCALP LVVIHQVVKL AIELLDCSQD QARKNSALFF AAAFVFRAIL DAFDAQDSLQ KLLAILKDAA SVRTGANTDR SAPEVMTSSE
0701: KQMAFHTCFA LRQYFRAHLL LLVDSIRPSR ISRGGVPSSM KPNIRAAYKP LDISNEAVDA IFLQLQKDRR LGPTFVKAQW PAVNNFLASS GHVTMLELCQ
0801: TPPVDRYLHD LLQYAFGVLH IVTSIPDGRK AIAHATLSNN RAGIAVILDA ANISNSIVDP EIIQPALNVL INLVCPPPSL SNKPPLAQNH QPVPGQATTR
0901: PSTDVAVGTQ STGNAPQTPV APASSGLVGD RRIFLGAGTG SAGLAAKLEQ VYRQAREAVR GNDGIKILLK LLQPRIYVNP PATPDCLRAL ACRVLLGLAR
1001: DDTIAQILTK LEVGKSLSEL IRDSGGQSSG TDQGRWQAEL AQVALELIGI VTNSGHATTL TASDAATPTL RRIERAAIAA ATPITYDSKE LLLLIHEHLQ
1101: ASGLGDTASA LLKEAQLTPL PSSASPSSIA YSTTQEMSTP LAQEQWPSGR ANSGFFTSKP KVCAHDEDPN SRSNAALSAK KKHLASSTLE MPTPVAQQQW
1201: PSGRANCGFC PSIPKINARD EDPSSRGNAA PSAKKKQLTF SPSFSSQSRK QSFSHDALPQ STQRINCCSN SDPALADTSE TAAELVLKND LDADAQFKTP
1301: ISFPRKRKLS ELRDSSVPGK RIDLGERRNS TFADGSGLQT PASALDANQS GSSRLGQMTP ASQLRLPSDP QPSNPERLSL DSLVVQYLKH QHRQCLAPIT
1401: TLPPVSLLHP HVCPEPKRLL EAPLNMTGRL GTRELQSFYS GVHGNRRDRQ FVFSRFKSWR SFRDETALFT CIALLGGTNH IAVGSHAGEI KIFEASSGSM
1501: LESVSGHQAP VTLVQPYVSR DTQLLLSSSS SDVQLWDASS ITGGPRHSFD GCKAAKFSNS GLQFAALSCE ASRKDVLLYD VQTCSPCQKL TDTVTSSRSN
1601: PYSLVHFSPC DTLILWNGVL WDRRIPEKVR RFDQFTDYGG GGFHPSRNEV IINSEIWDMR TFKLLRSVPS LDQTAITFNS RGDVIYAMLR RNIEDVMSAV
1701: HTRRVKHPLF AAFRTLDAIN YSDIATIPVD RCLLDFATEP TDSFLGLITM EDQEDMFSSA RMYEIGRRRP TDDDSDPDDD DETEDEDEDD EEEDDLDRIL
1801: GLAGDNSDSG DDDLSSEDNE DSVSDFDEEA DILIDGDFME ELIEGENEDD GNGEDEDDDD DGEMQDFMSS GEEDDYRDNI RSS
0101: HNSGKLCILI RENDEFFELI SSTFLSENSY STAVKAASAR LLMNCSLTWM YPHVFDDAVT ENFKNWVMEE AVKFPGEDSA KKEASDFEML KTYSTGLLAL
0201: SLASRGQIVE DVLTSGLSAK LMHYLRVRVL KEPSTSRIHT TETKHVSLKT KEEGRSRVRK IVDTVEGDHV LETDSGREMG QTDVQPDGEF EIDGRDVFNV
0301: SGVVDCKIKP GDDNSVRDDP SRHRLNRSKS RGRGRVHEGA PDTEVLLASP RLGRLLVRDR DLSKISDGRN AEDVTVCLGK MKSGIMEIER EDNDECFQGC
0401: IIGTKNITDL VKRAVGAAET EARAAHAPDD AAKAAGDAAA ELVKTAALEE FKSSGSEEAA VSAATRAAIT VIDAAEVSRN PTCVTSDQTT DVSEVSLPDI
0501: ESLAQLQEKY CIQCLEILGE YVEVLGPVLH EKGVDVCIVL LERTSQLDDR STVSPLLPDV MKLICALAAH RKFAAMFVER RGILKLLAVP RVSETFYGLS
0601: SCLYTIGSLQ GIMERVCALP LVVIHQVVKL AIELLDCSQD QARKNSALFF AAAFVFRAIL DAFDAQDSLQ KLLAILKDAA SVRTGANTDR SAPEVMTSSE
0701: KQMAFHTCFA LRQYFRAHLL LLVDSIRPSR ISRGGVPSSM KPNIRAAYKP LDISNEAVDA IFLQLQKDRR LGPTFVKAQW PAVNNFLASS GHVTMLELCQ
0801: TPPVDRYLHD LLQYAFGVLH IVTSIPDGRK AIAHATLSNN RAGIAVILDA ANISNSIVDP EIIQPALNVL INLVCPPPSL SNKPPLAQNH QPVPGQATTR
0901: PSTDVAVGTQ STGNAPQTPV APASSGLVGD RRIFLGAGTG SAGLAAKLEQ VYRQAREAVR GNDGIKILLK LLQPRIYVNP PATPDCLRAL ACRVLLGLAR
1001: DDTIAQILTK LEVGKSLSEL IRDSGGQSSG TDQGRWQAEL AQVALELIGI VTNSGHATTL TASDAATPTL RRIERAAIAA ATPITYDSKE LLLLIHEHLQ
1101: ASGLGDTASA LLKEAQLTPL PSSASPSSIA YSTTQEMSTP LAQEQWPSGR ANSGFFTSKP KVCAHDEDPN SRSNAALSAK KKHLASSTLE MPTPVAQQQW
1201: PSGRANCGFC PSIPKINARD EDPSSRGNAA PSAKKKQLTF SPSFSSQSRK QSFSHDALPQ STQRINCCSN SDPALADTSE TAAELVLKND LDADAQFKTP
1301: ISFPRKRKLS ELRDSSVPGK RIDLGERRNS TFADGSGLQT PASALDANQS GSSRLGQMTP ASQLRLPSDP QPSNPERLSL DSLVVQYLKH QHRQCLAPIT
1401: TLPPVSLLHP HVCPEPKRLL EAPLNMTGRL GTRELQSFYS GVHGNRRDRQ FVFSRFKSWR SFRDETALFT CIALLGGTNH IAVGSHAGEI KIFEASSGSM
1501: LESVSGHQAP VTLVQPYVSR DTQLLLSSSS SDVQLWDASS ITGGPRHSFD GCKAAKFSNS GLQFAALSCE ASRKDVLLYD VQTCSPCQKL TDTVTSSRSN
1601: PYSLVHFSPC DTLILWNGVL WDRRIPEKVR RFDQFTDYGG GGFHPSRNEV IINSEIWDMR TFKLLRSVPS LDQTAITFNS RGDVIYAMLR RNIEDVMSAV
1701: HTRRVKHPLF AAFRTLDAIN YSDIATIPVD RCLLDFATEP TDSFLGLITM EDQEDMFSSA RMYEIGRRRP TDDDSDPDDD DETEDEDEDD EEEDDLDRIL
1801: GLAGDNSDSG DDDLSSEDNE DSVSDFDEEA DILIDGDFME ELIEGENEDD GNGEDEDDDD DGEMQDFMSS GEEDDYRDNI RSS
Arabidopsis Description
DCAF1DDB1- and CUL4-associated factor homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M086]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.