Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH21073 | Soybean | cytosol | 36.17 | 99.65 |
| KRH21072 | Soybean | plastid | 57.49 | 93.79 |
| KRH58640 | Soybean | cytosol | 88.96 | 90.45 |
| KRH42547 | Soybean | cytosol | 86.93 | 89.08 |
| VIT_10s0003g03710.t01 | Wine grape | cytosol | 90.61 | 89.03 |
| Solyc02g021470.2.1 | Tomato | cytosol, nucleus, plastid | 87.94 | 88.28 |
| CDY33461 | Canola | cytosol | 81.6 | 84.49 |
| Bra025031.1-P | Field mustard | cytosol | 81.22 | 84.21 |
| TraesCS5A01G425300.1 | Wheat | cytosol | 75.63 | 83.83 |
| CDX77644 | Canola | cytosol | 81.47 | 83.7 |
| CDY43957 | Canola | cytosol | 82.36 | 83.63 |
| Bra022023.1-P | Field mustard | plastid | 82.87 | 83.18 |
| CDX87735 | Canola | cytosol | 82.11 | 82.95 |
| CDY03235 | Canola | plastid | 82.61 | 82.41 |
| CDY35152 | Canola | plastid | 82.11 | 82.32 |
| Bra017569.1-P | Field mustard | plastid | 81.98 | 82.19 |
| Solyc02g070460.2.1 | Tomato | plastid | 83.5 | 82.04 |
| AT5G46210.1 | Thale cress | cytosol | 81.73 | 81.31 |
| GSMUA_Achr4P22850_001 | Banana | cytosol | 82.74 | 81.2 |
| TraesCS5B01G427400.1 | Wheat | cytosol | 79.06 | 77.58 |
| EER93338 | Sorghum | plastid | 81.85 | 77.34 |
| Zm00001d034361_P001 | Maize | cytosol, plastid | 80.96 | 76.68 |
| TraesCS5D01G433700.3 | Wheat | cytosol, plastid | 80.08 | 76.02 |
| HORVU5Hr1G103580.2 | Barley | plastid | 80.2 | 75.87 |
| Zm00001d013116_P002 | Maize | plastid | 81.22 | 74.42 |
| GSMUA_Achr7P01270_001 | Banana | cytosol | 82.49 | 74.29 |
| KRH45896 | Soybean | cytosol | 38.2 | 41.12 |
| KRG93520 | Soybean | cytosol | 38.07 | 40.93 |
| KRG99095 | Soybean | cytosol | 37.94 | 40.85 |
| KRH18483 | Soybean | cytosol | 37.56 | 40.38 |
| KRH70713 | Soybean | cytosol | 35.03 | 37.96 |
| KRH37131 | Soybean | cytosol, nucleus | 30.08 | 31.85 |
| KRH50876 | Soybean | endoplasmic reticulum | 30.08 | 31.85 |
| KRH12127 | Soybean | cytosol | 30.08 | 31.85 |
| KRH02236 | Soybean | cytosol, nucleus | 30.08 | 31.85 |
| KRG96405 | Soybean | cytosol | 29.06 | 31.03 |
| KRH68142 | Soybean | cytosol | 29.06 | 30.9 |
| KRH15695 | Soybean | cytosol | 12.56 | 27.12 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:1.10.10.2620 | Gene3D:1.20.1310.10 | EntrezGene:100805491 | MapMan:19.2.2.8.3.1 | MapMan:26.1.1.3.1 |
| EMBL:ACUP02009186 | InterPro:Cullin_CS | InterPro:Cullin_N | InterPro:Cullin_homology | InterPro:Cullin_homology_sf | InterPro:Cullin_neddylation_domain |
| InterPro:Cullin_repeat-like_dom_sf | EnsemblPlantsGene:GLYMA_15G093600 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 |
| GO:GO:0031461 | GO:GO:0031625 | GO:GO:0042787 | GO:GO:0061630 | GO:GO:0080008 | UniProt:I1MF26 |
| InterPro:IPR016158 | InterPro:IPR036388 | EnsemblPlants:KRH11182 | ProteinID:KRH11182 | ProteinID:KRH11182.1 | PFAM:PF00888 |
| PFAM:PF10557 | ScanProsite:PS01256 | PFscan:PS50069 | PANTHER:PTHR11932 | PANTHER:PTHR11932:SF27 | SMART:SM00182 |
| SMART:SM00884 | SUPFAM:SSF46785 | SUPFAM:SSF74788 | SUPFAM:SSF75632 | UniParc:UPI000233B164 | InterPro:WH-like_DNA-bd_sf |
| InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr15:-:7246404..7258440
Molecular Weight (calculated)
90084.1 Da
IEP (calculated)
8.532
GRAVY (calculated)
-0.369
Length
788 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLPTKRSGT AGSSPSPPPP MKKAKSLLLH SSSSSDAVLD PSSMPLDDDL PNARAANLAR KKATPPQPAK KLLIKLHKAK PTLPTNFEED TWAKLKSAIR
101: AIFLKQPNSC DLEKLYQAVN DLCLYKMGGN LYQRIEKECE AHISAALQSL VGQSPDLVVF LSLVERCWQD LCDQMLMIRG IALFLDRTYV KQTANVRSLW
201: DMGLQLFRKH LSLSPEVEHK TVTGLLRMIE SERKGEAVDR TLLNHLLKMF TALGIYAESF EKPFLECTSE FYAAEGVKYM QQSDVPDYLK HVEIRLQEEH
301: ERCLIYLDAS TRKPLIATAE KQLLERHIPA ILDKGFAMLM DGNRIEDLQR MYLLFSRVNA LESLRLAISS YIRRTGQGIV LDEEKDKDMV SSLLEFKASL
401: DTTWEESFSK NEAFCNTIKD SFEHLINLRQ NRPAELIAKF LDEKLRAGNK GTSEEELEGT LDKVLVLFRF IQGKDVFEAF YKKDLAKRLL LGKSASIDAE
501: KSMISKLKTE CGSQFTNKLE GMFKDIELSK EINESFKQSS QARTKLPSGI EMSVHVLTTG YWPTYPPMDV RLPHELNVYQ DIFKEFYLSK YSGRRLMWQN
601: SLGHCVLKAE FPKGKKELAV SLFQTVVLML FNDAEKLSFQ DIKDSTGIEG KELRRTLQSL ACGKVRVLQK LPKGRDVEDD DSFVFNEGFT APLYRIKVNA
701: IQLKETVEEN TSTTERVFQD RQYQVDAAIV RIMKTRKVLS HTLLITELFQ QLKFPIKPAD LKKRIESLID REYLERDKNN PQIYNYLA
101: AIFLKQPNSC DLEKLYQAVN DLCLYKMGGN LYQRIEKECE AHISAALQSL VGQSPDLVVF LSLVERCWQD LCDQMLMIRG IALFLDRTYV KQTANVRSLW
201: DMGLQLFRKH LSLSPEVEHK TVTGLLRMIE SERKGEAVDR TLLNHLLKMF TALGIYAESF EKPFLECTSE FYAAEGVKYM QQSDVPDYLK HVEIRLQEEH
301: ERCLIYLDAS TRKPLIATAE KQLLERHIPA ILDKGFAMLM DGNRIEDLQR MYLLFSRVNA LESLRLAISS YIRRTGQGIV LDEEKDKDMV SSLLEFKASL
401: DTTWEESFSK NEAFCNTIKD SFEHLINLRQ NRPAELIAKF LDEKLRAGNK GTSEEELEGT LDKVLVLFRF IQGKDVFEAF YKKDLAKRLL LGKSASIDAE
501: KSMISKLKTE CGSQFTNKLE GMFKDIELSK EINESFKQSS QARTKLPSGI EMSVHVLTTG YWPTYPPMDV RLPHELNVYQ DIFKEFYLSK YSGRRLMWQN
601: SLGHCVLKAE FPKGKKELAV SLFQTVVLML FNDAEKLSFQ DIKDSTGIEG KELRRTLQSL ACGKVRVLQK LPKGRDVEDD DSFVFNEGFT APLYRIKVNA
701: IQLKETVEEN TSTTERVFQD RQYQVDAAIV RIMKTRKVLS HTLLITELFQ QLKFPIKPAD LKKRIESLID REYLERDKNN PQIYNYLA
001: MSLPTKRSTF SAASASDDSS YSSPPMKKAK NDLHHSPQHP NTADKVVGFH MEEDPTPAAA NLSRKKATLP QPTKKFVIKL NKAKPTLPTN FEENTWEKLQ
101: SAIRAIFLKK KISFDLESLY QAVDNLCLHK LDGKLYDQIE KECEEHISAA LQSLVGQNTD LTVFLSRVEK CWQDFCDQML MIRSIALTLD RKYVIQNPNV
201: RSLWEMGLQL FRKHLSLAPE VEQRTVKGLL SMIEKERLAE AVNRTLLSHL LKMFTALGIY MESFEKPFLE GTSEFYAAEG MKYMQQSDVP EYLKHVEGRL
301: HEENERCILY IDAVTRKPLI TTVERQLLER HILVVLEKGF TTLMDGRRTE DLQRMQTLFS RVNALESLRQ ALSSYVRKTG QKIVMDEEKD KDMVQSLLDF
401: KASLDIIWEE SFYKNESFGN TIKDSFEHLI NLRQNRPAEL IAKFLDEKLR AGNKGTSEEE LESVLEKVLV LFRFIQGKDV FEAFYKKDLA KRLLLGKSAS
501: IDAEKSMISK LKTECGSQFT NKLEGMFKDI ELSKEINESF KQSSQARTKL PSGIEMSVHV LTTGYWPTYP PMDVKLPHEL NVYQDIFKEF YLSKYSGRRL
601: MWQNSLGHCV LKADFSKGKK ELAVSLFQAV VLMLFNDAMK LSFEDIKDST SIEDKELRRT LQSLACGKVR VLQKNPKGRD VEDGDEFEFN DEFAAPLYRI
701: KVNAIQMKET VEENTSTTER VFQDRQYQID AAIVRIMKTR KVLSHTLLIT ELFQQLKFPI KPADLKKRIE SLIDREYLER EKSNPQIYNY LA
101: SAIRAIFLKK KISFDLESLY QAVDNLCLHK LDGKLYDQIE KECEEHISAA LQSLVGQNTD LTVFLSRVEK CWQDFCDQML MIRSIALTLD RKYVIQNPNV
201: RSLWEMGLQL FRKHLSLAPE VEQRTVKGLL SMIEKERLAE AVNRTLLSHL LKMFTALGIY MESFEKPFLE GTSEFYAAEG MKYMQQSDVP EYLKHVEGRL
301: HEENERCILY IDAVTRKPLI TTVERQLLER HILVVLEKGF TTLMDGRRTE DLQRMQTLFS RVNALESLRQ ALSSYVRKTG QKIVMDEEKD KDMVQSLLDF
401: KASLDIIWEE SFYKNESFGN TIKDSFEHLI NLRQNRPAEL IAKFLDEKLR AGNKGTSEEE LESVLEKVLV LFRFIQGKDV FEAFYKKDLA KRLLLGKSAS
501: IDAEKSMISK LKTECGSQFT NKLEGMFKDI ELSKEINESF KQSSQARTKL PSGIEMSVHV LTTGYWPTYP PMDVKLPHEL NVYQDIFKEF YLSKYSGRRL
601: MWQNSLGHCV LKADFSKGKK ELAVSLFQAV VLMLFNDAMK LSFEDIKDST SIEDKELRRT LQSLACGKVR VLQKNPKGRD VEDGDEFEFN DEFAAPLYRI
701: KVNAIQMKET VEENTSTTER VFQDRQYQID AAIVRIMKTR KVLSHTLLIT ELFQQLKFPI KPADLKKRIE SLIDREYLER EKSNPQIYNY LA
Arabidopsis Description
CUL4Cullin-4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGH4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.