CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400038140	Potato	cytosol	29.86	48.02
KRH02236	Soybean	cytosol, nucleus	90.96	44.62
KRH50876	Soybean	endoplasmic reticulum	90.68	44.49
KRH37131	Soybean	cytosol, nucleus	89.59	43.95
KRH12127	Soybean	cytosol	89.32	43.82
VIT_05s0020g01320.t01	Wine grape	cytosol	85.75	42.07
Solyc01g067100.2.1	Tomato	cytosol	85.48	42.05
GSMUA_AchrUn_...	Banana	cytosol	82.74	41.54
GSMUA_Achr1P14740_001	Banana	cytosol	83.29	40.86
GSMUA_Achr7P03700_001	Banana	cytosol	82.74	40.59
PGSC0003DMT400023105	Potato	cytosol	63.01	40.56
PGSC0003DMT400061802	Potato	cytosol	78.9	39.18
TraesCS1A01G090000.1	Wheat	cytosol	79.18	38.84
TraesCS1B01G118000.1	Wheat	cytosol	79.18	38.84
HORVU1Hr1G020400.1	Barley	cytosol	79.18	38.79
TraesCS1D01G098500.3	Wheat	cytosol	78.9	38.71
Os01t0369000-01	Rice	cytosol	78.08	38.31
EES00748	Sorghum	cytosol	78.08	38.31
PGSC0003DMT400085888	Potato	cytosol	14.25	37.68
PGSC0003DMT400029607	Potato	cytosol	74.79	36.94
EES19028	Sorghum	cytosol	75.07	36.83
TraesCS1B01G117900.1	Wheat	cytosol	74.52	36.46
TraesCS1D01G098400.2	Wheat	cytosol	74.52	36.46
TraesCS1A01G089900.1	Wheat	cytosol, golgi	74.52	36.46
Solyc01g067210.2.1	Tomato	cytosol	56.44	36.2
HORVU1Hr1G020390.1	Barley	cytosol	73.7	36.06
Zm00001d010858_P007	Maize	cytosol	73.97	36.05
KRG96405	Soybean	cytosol	72.6	35.91
KRH68142	Soybean	cytosol	72.6	35.76
PGSC0003DMT400023111	Potato	cytosol	71.51	35.37
CDX91291	Canola	nucleus	11.78	35.25
PGSC0003DMT400022865	Potato	cytosol	70.68	35.1
Zm00001d024855_P007	Maize	cytosol	72.6	34.19
Solyc01g067140.1.1	Tomato	cytosol	27.4	24.75
KRH45896	Soybean	cytosol	30.96	15.44
KRH18483	Soybean	cytosol	30.96	15.42
KRG93520	Soybean	cytosol	30.96	15.42
KRG99095	Soybean	cytosol	30.68	15.3
KRH70713	Soybean	cytosol	29.86	14.99
KRH21072	Soybean	plastid	17.26	13.04
KRH42547	Soybean	cytosol	27.12	12.87
KRH58640	Soybean	cytosol	27.12	12.77
KRH11182	Soybean	cytosol, plastid	27.12	12.56
KRH21073	Soybean	cytosol	5.48	6.99
Os05t0149600-02	Rice	cytosol, plasma membrane	3.29	4.63
PGSC0003DMT400097727	Potato	cytosol	1.1	2.33

Protein Annotations

Gene3D:1.20.1310.10	MapMan:35.1	UniProt:A0A0R0GND9	EMBL:ACUP02008630	InterPro:Cullin_N	InterPro:Cullin_homology
InterPro:Cullin_homology_sf	InterPro:Cullin_repeat-like_dom_sf	EnsemblPlantsGene:GLYMA_14G104800	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0019538
GO:GO:0031625	InterPro:IPR016158	EnsemblPlants:KRH15695	ProteinID:KRH15695	ProteinID:KRH15695.1	PFAM:PF00888
PFscan:PS50069	PANTHER:PTHR11932	PANTHER:PTHR11932:SF124	SMART:SM00182	SUPFAM:SSF74788	SUPFAM:SSF75632
UniParc:UPI0006EDE0C9	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr14:-:10748114..10751676

Molecular Weight (calculated)

42463.0 Da

IEP (calculated)

7.232

GRAVY (calculated)

-0.426

Length

365 amino acids

Sequence
(BLAST)

001: VLPSLRVKHN EFMLRELVKR WANHKIMVWR LSRFFHYLDR LYCLEVYKEL NGKVRDAVIS LDSLLKNVLD IFVEIGMGQM DHYENDFEAA MLKDTSSYYS
101: RKASNWILED SCPDYMLKEC LKWEKDRVAH YLHSSREPKL LEKVQHELLS VYTNQLLKKE HSGYHALLRD DKHAEDAASN KKVEKKDIVG LQEHVFFQKV
201: IELFDKYVTY VNDYFHNHTL FHKVLGFEVF CNKGVAGSSS AELLASFCDN ILKKGGSEKL SDEAIEETLE KVVKLLAYIS GKDLFAKFYR KKLARRLLFD
301: KSANDDHERS ILTKLKQQCG GQFTSKMEGM VTDLTLAKEN QTSFEEYLSN NPNVDPSMDL TVTAL

Best Arabidopsis Sequence Match ( AT1G02980.2 )
(BLAST)

001: MAKKDSVLEA GWSVMEAGVA KLQKILEEVP DEPPFDPVQR MQLYTTVHNL CTQKPPNDYS QQIYDRYGGV YVDYNKQTVL PAIREKHGEY MLRELVKRWA
101: NQKILVRWLS HFFEYLDRFY TRRGSHPTLS AVGFISFRDL VYQELQSKAK DAVLALIHKE REGEQIDRAL LKNVIDVYCG NGMGELVKYE EDFESFLLED
201: SASYYSRNAS RWNQENSCPD YMIKAEESLR LEKERVTNYL HSTTEPKLVA KVQNELLVVV AKQLIENEHS GCRALLRDDK MDDLARMYRL YHPIPQGLDP
301: VADLFKQHIT VEGSALIKQA TEAATDKAAS TSGLKVQDQV LIRQLIDLHD KFMVYVDECF QKHSLFHKAL KEAFEVFCNK TVAGVSSAEI LATYCDNILK
401: TGGGIEKLEN EDLELTLEKV VKLLVYISDK DLFAEFFRKK QARRLLFDRN GNDYHERSLL TKFKELLGAQ FTSKMEGMLT DMTLAKEHQT NFVEFLSVNK
501: TKKLGMDFTV TVLTTGFWPS YKTTDLNLPI EMVNCVEAFK AYYGTKTNSR RLSWIYSLGT CQLAGKFDKK TIEIVVTTYQ AAVLLLFNNT ERLSYTEILE
601: QLNLGHEDLA RLLHSLSCLK YKILIKEPMS RNISNTDTFE FNSKFTDKMR RIRVPLPPMD ERKKIVEDVD KDRRYAIDAA LVRIMKSRKV LGHQQLVSEC
701: VEHLSKMFKP DIKMIKKRIE DLISRDYLER DTDNPNTFKY LA

Arabidopsis Description

CUL2Cullin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRZ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.