Factsheet for TraesCS1B01G117900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G098400.2	Wheat	cytosol	99.73	99.73
TraesCS1A01G089900.1	Wheat	cytosol, golgi	99.73	99.73
HORVU1Hr1G020390.1	Barley	cytosol	98.66	98.66
EES19028	Sorghum	cytosol	93.03	93.28
Os05t0149600-02	Rice	cytosol, plasma membrane	31.9	91.89
Zm00001d010858_P007	Maize	cytosol	91.96	91.59
TraesCS1B01G118000.1	Wheat	cytosol	89.14	89.38
Zm00001d024855_P007	Maize	cytosol	91.15	87.74
VIT_05s0020g01320.t01	Wine grape	cytosol	83.24	83.47
GSMUA_AchrUn_...	Banana	cytosol	80.83	82.94
GSMUA_Achr7P03700_001	Banana	cytosol	82.44	82.66
GSMUA_Achr1P14740_001	Banana	cytosol	82.17	82.39
KRH50876	Soybean	endoplasmic reticulum	81.9	82.12
KRH12127	Soybean	cytosol	81.64	81.85
KRH02236	Soybean	cytosol, nucleus	81.64	81.85
KRH37131	Soybean	cytosol, nucleus	81.5	81.72
PGSC0003DMT400061802	Potato	cytosol	77.61	78.78
PGSC0003DMT400029607	Potato	cytosol	76.54	77.27
KRH15695	Soybean	cytosol	36.46	74.52
PGSC0003DMT400023105	Potato	cytosol	55.63	73.19
PGSC0003DMT400023111	Potato	cytosol	71.05	71.82
PGSC0003DMT400022865	Potato	cytosol	69.97	71.02
CDX91291	Canola	nucleus	11.26	68.85
TraesCS3B01G044500.1	Wheat	cytosol	66.22	66.58
PGSC0003DMT400038140	Potato	cytosol	19.71	64.76
PGSC0003DMT400097727	Potato	cytosol	14.48	62.79
Solyc05g018040.1.1	Tomato	cytosol	19.17	56.97
PGSC0003DMT400085888	Potato	cytosol	8.98	48.55
TraesCS2B01G550000.1	Wheat	cytosol	34.45	35.11
TraesCS6B01G335200.1	Wheat	cytosol	34.32	34.78
TraesCS3B01G497300.1	Wheat	cytosol	12.6	31.33
TraesCS5B01G427400.1	Wheat	cytosol	31.77	29.51

Protein Annotations

Gene3D:1.10.10.10	Gene3D:1.10.10.2620	Gene3D:1.20.1310.10	MapMan:19.2.2.8.1.2	InterPro:Cullin_CS	InterPro:Cullin_N
InterPro:Cullin_homology	InterPro:Cullin_homology_sf	InterPro:Cullin_neddylation_domain	InterPro:Cullin_repeat-like_dom_sf	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006511	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0019538	GO:GO:0031461	GO:GO:0031625
InterPro:IPR016158	InterPro:IPR036388	PFAM:PF00888	PFAM:PF10557	ScanProsite:PS01256	PFscan:PS50069
PANTHER:PTHR11932	PANTHER:PTHR11932:SF97	SMART:SM00182	SMART:SM00884	SUPFAM:SSF46785	SUPFAM:SSF74788
SUPFAM:SSF75632	EnsemblPlantsGene:TraesCS1B01G117900	EnsemblPlants:TraesCS1B01G117900.1	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg

Description

No Description!

Coordinates

chr1B:-:137632765..137638424

Molecular Weight (calculated)

86794.3 Da

IEP (calculated)

6.886

GRAVY (calculated)

-0.429

Length

746 amino acids

Sequence
(BLAST)

001: MAGHGQDRKT IDLEDGWAFM QRGITKLINI LEGKPEPQFS SEDYMMLYTT IYNMCTQKPP HDYSQQLYDK YREAFEEYIR ATVLPSLKEK HDEFMLRELV
101: QRWSNHKVMV RWLSRFFHYL DRYFITRRSL TALRDVGLIC FRDLIFQEIK GKVKDAVIAL IDQEREGEQI DRALLKNVLD IFVEIGLGNM DCYENDFEDF
201: LLKDTTDYYS VKAQSWIVED SCPDYMIKAE ECLKREKERV GHYLHINSEP KLLEKVQNEL LASYATQLLE KEHSGCFALL RDDKVEDLSR MYRLFSKITR
301: GLEPISNMFK THVTNEGTAL VKQAEDSANN KKPEKKEMVG MQEQVFVWKI IELHDKYVAY VTDCFQGHTL FHKALKEAFE VFCNKGVSGS SSAELLATFC
401: DNILKKGCSE KLSDEAIEDA LEKVVRLLAY ISDKDLFAEF YRKKLARRLL FDKSANDEHE RSILTKLKQQ CGGQFTSKME GMVTDLTVAR DHQTKFEEFV
501: ADHPESNPGV DLAVTVLTTG FWPTYKTFDI NLPFEMVKCV EVSKEFYATR TKHRKLTWIY SLGTCNISAK FDAKTIELIV TTYQAALLLL FNGSTKLSYS
601: EIVTQLNLSD DDVVRLLHSL SCAKYKILSK EPAGRTISPN DSFEFNSKFT DRMRRIKIPL PPVDEKKKVV EDVDKDRRYA IDASIVRIMK SRKVMAHTQL
701: VAECVEQLSR MFKPDFKAIK KRIEDLITRD YLERDKDNAN TYRYLA

Best Arabidopsis Sequence Match ( AT1G02980.2 )
(BLAST)

001: MAKKDSVLEA GWSVMEAGVA KLQKILEEVP DEPPFDPVQR MQLYTTVHNL CTQKPPNDYS QQIYDRYGGV YVDYNKQTVL PAIREKHGEY MLRELVKRWA
101: NQKILVRWLS HFFEYLDRFY TRRGSHPTLS AVGFISFRDL VYQELQSKAK DAVLALIHKE REGEQIDRAL LKNVIDVYCG NGMGELVKYE EDFESFLLED
201: SASYYSRNAS RWNQENSCPD YMIKAEESLR LEKERVTNYL HSTTEPKLVA KVQNELLVVV AKQLIENEHS GCRALLRDDK MDDLARMYRL YHPIPQGLDP
301: VADLFKQHIT VEGSALIKQA TEAATDKAAS TSGLKVQDQV LIRQLIDLHD KFMVYVDECF QKHSLFHKAL KEAFEVFCNK TVAGVSSAEI LATYCDNILK
401: TGGGIEKLEN EDLELTLEKV VKLLVYISDK DLFAEFFRKK QARRLLFDRN GNDYHERSLL TKFKELLGAQ FTSKMEGMLT DMTLAKEHQT NFVEFLSVNK
501: TKKLGMDFTV TVLTTGFWPS YKTTDLNLPI EMVNCVEAFK AYYGTKTNSR RLSWIYSLGT CQLAGKFDKK TIEIVVTTYQ AAVLLLFNNT ERLSYTEILE
601: QLNLGHEDLA RLLHSLSCLK YKILIKEPMS RNISNTDTFE FNSKFTDKMR RIRVPLPPMD ERKKIVEDVD KDRRYAIDAA LVRIMKSRKV LGHQQLVSEC
701: VEHLSKMFKP DIKMIKKRIE DLISRDYLER DTDNPNTFKY LA

Arabidopsis Description

CUL2Cullin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRZ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.