Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400013645 | Potato | cytosol | 33.14 | 73.08 |
| PGSC0003DMT400023105 | Potato | cytosol | 61.05 | 18.52 |
| PGSC0003DMT400023111 | Potato | cytosol | 78.49 | 18.29 |
| PGSC0003DMT400022865 | Potato | cytosol | 77.33 | 18.1 |
| PGSC0003DMT400029607 | Potato | cytosol | 75.58 | 17.59 |
| PGSC0003DMT400061802 | Potato | cytosol | 73.26 | 17.14 |
| KRH37131 | Soybean | cytosol, nucleus | 66.28 | 15.32 |
| GSMUA_Achr1P14740_001 | Banana | cytosol | 65.12 | 15.05 |
| KRH12127 | Soybean | cytosol | 65.12 | 15.05 |
| GSMUA_AchrUn_... | Banana | cytosol | 63.37 | 14.99 |
| KRH02236 | Soybean | cytosol, nucleus | 64.53 | 14.92 |
| KRH50876 | Soybean | endoplasmic reticulum | 64.53 | 14.92 |
| EES19028 | Sorghum | cytosol | 63.95 | 14.78 |
| VIT_05s0020g01320.t01 | Wine grape | cytosol | 63.95 | 14.78 |
| Zm00001d010858_P007 | Maize | cytosol | 63.95 | 14.69 |
| GSMUA_Achr7P03700_001 | Banana | cytosol | 63.37 | 14.65 |
| TraesCS1D01G098400.2 | Wheat | cytosol | 62.79 | 14.48 |
| HORVU1Hr1G020390.1 | Barley | cytosol | 62.79 | 14.48 |
| TraesCS1B01G117900.1 | Wheat | cytosol | 62.79 | 14.48 |
| TraesCS1A01G089900.1 | Wheat | cytosol, golgi | 62.79 | 14.48 |
| TraesCS1A01G090000.1 | Wheat | cytosol | 62.21 | 14.38 |
| TraesCS1D01G098500.3 | Wheat | cytosol | 61.63 | 14.25 |
| TraesCS1B01G118000.1 | Wheat | cytosol | 61.63 | 14.25 |
| HORVU1Hr1G020400.1 | Barley | cytosol | 61.63 | 14.23 |
| Zm00001d024855_P007 | Maize | cytosol | 63.95 | 14.19 |
| VIT_07s0104g01590.t01 | Wine grape | cytosol | 61.05 | 14.17 |
| EES00748 | Sorghum | cytosol | 60.47 | 13.98 |
| PGSC0003DMT400003338 | Potato | cytosol | 35.47 | 8.32 |
| PGSC0003DMT400016765 | Potato | cytosol | 34.88 | 8.17 |
| PGSC0003DMT400074970 | Potato | cytosol | 5.23 | 3.01 |
| KRH15695 | Soybean | cytosol | 2.33 | 1.1 |
| CDX91291 | Canola | nucleus | 0.58 | 0.82 |
| PGSC0003DMT400063662 | Potato | cytosol | 1.16 | 0.69 |
| PGSC0003DMT400038140 | Potato | cytosol | 0.58 | 0.44 |
| Solyc06g008080.1.1 | Tomato | cytosol | 0.58 | 0.33 |
| PGSC0003DMT400085888 | Potato | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:1.10.10.2620 | MapMan:35.1 | InterPro:Cullin_CS | InterPro:Cullin_N | InterPro:Cullin_homology_sf |
| InterPro:Cullin_neddylation_domain | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0019538 | GO:GO:0031461 | GO:GO:0031625 | InterPro:IPR036388 | UniProt:M1E1A4 | PFAM:PF00888 |
| PFAM:PF10557 | EnsemblPlantsGene:PGSC0003DMG400047298 | PGSC:PGSC0003DMG400047298 | EnsemblPlants:PGSC0003DMT400097727 | ScanProsite:PS01256 | PANTHER:PTHR11932 |
| PANTHER:PTHR11932:SF97 | SMART:SM00884 | SUPFAM:SSF46785 | SUPFAM:SSF75632 | UniParc:UPI0002963DB4 | InterPro:WH-like_DNA-bd_sf |
| InterPro:WH_DNA-bd_sf | : | : | : | : | : |
Description
Cullin 1B [Source:PGSC_GENE;Acc:PGSC0003DMG400047298]
Coordinates
chr10:-:19122335..19122853
Molecular Weight (calculated)
20085.3 Da
IEP (calculated)
8.772
GRAVY (calculated)
-0.366
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MVNNIYPNNS EIKSQLNLAN DDLIRLLQSL SCAKYKILIK EPSNTTVSSS DYFELNSKFI DRMSWIRVPL PPVDERKNVV ENVGKDRRYA IDACIVRIMK
101: SRKVLPDQQL VAECSEQLSS MFKPNLKAIK KQMEDLITRD YLERDQDNQN LFKYLARTNN LVSYDLLFLV FI
101: SRKVLPDQQL VAECSEQLSS MFKPNLKAIK KQMEDLITRD YLERDQDNQN LFKYLARTNN LVSYDLLFLV FI
001: MATILFKVIM MKELILLEEG WSVMKTGVAK LQRILEDLSE PPFDPGQYIN LYTIIYDMCL QQPPNDYSQE LYNKYRGVVD HYNKETVLPS MRERHGEYML
101: RELVKRWANH KILVRWLSRF CFYLDRFYVA RRGLPTLNDV GFTSFHDLVY QEIQSEAKDV LLALIHKERE GEQIDRTLVK NVIDVYCGNG VGQMVIYEED
201: FESFLLQDTA SYYSRKASRW SQEDSCPDYM LKAEECLKLE KERVTNYLHS TTEPKLVEKV QNELLVVVAK QLIENEHSGC LALLRDDKMG DLSRMYRLYR
301: LIPQGLEPIA DLFKQHVTAE GNALIKQAAD AATNQDASAS QVLVRKEIEL HDKYMVYVDE CFQKHSLFHK LLKEAFEVFC NKTVAGASSA EILATYCDNI
401: LKTRGGSEKL SDEATEITLE KVVNLLVYIS DKDLFAEFYR KKQARRLLFD RSGIMKEVTD ITLARELQTN FVDYLSANMT TKLGIDFTVT VLTTGFWPSY
501: KTTDLNLPTE MVNCVEAFKV FYGTKTNSRR LSWIYSLGTC HILGKFEKKT MELVVSTYQA AVLLLFNNAE RLSYTEISEQ LNLSHEDLVR LLHSLSCLKY
601: KILIKEPMSR TISKTDTFEF NSKFTDKMRK IRVPLPPMDE RKKVVEDVDK DRRYAIDAAL VRIMKSRKVL AHQQLVSECV EHLSKMFKPD IKMIKKRIED
701: LINRDYLERD TENANTFKYV A
101: RELVKRWANH KILVRWLSRF CFYLDRFYVA RRGLPTLNDV GFTSFHDLVY QEIQSEAKDV LLALIHKERE GEQIDRTLVK NVIDVYCGNG VGQMVIYEED
201: FESFLLQDTA SYYSRKASRW SQEDSCPDYM LKAEECLKLE KERVTNYLHS TTEPKLVEKV QNELLVVVAK QLIENEHSGC LALLRDDKMG DLSRMYRLYR
301: LIPQGLEPIA DLFKQHVTAE GNALIKQAAD AATNQDASAS QVLVRKEIEL HDKYMVYVDE CFQKHSLFHK LLKEAFEVFC NKTVAGASSA EILATYCDNI
401: LKTRGGSEKL SDEATEITLE KVVNLLVYIS DKDLFAEFYR KKQARRLLFD RSGIMKEVTD ITLARELQTN FVDYLSANMT TKLGIDFTVT VLTTGFWPSY
501: KTTDLNLPTE MVNCVEAFKV FYGTKTNSRR LSWIYSLGTC HILGKFEKKT MELVVSTYQA AVLLLFNNAE RLSYTEISEQ LNLSHEDLVR LLHSLSCLKY
601: KILIKEPMSR TISKTDTFEF NSKFTDKMRK IRVPLPPMDE RKKVVEDVDK DRRYAIDAAL VRIMKSRKVL AHQQLVSECV EHLSKMFKPD IKMIKKRIED
701: LINRDYLERD TENANTFKYV A
Arabidopsis Description
Putative cullin-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P0CH31]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.