CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0369000-01	Rice	cytosol	96.1	96.1
TraesCS1B01G118000.1	Wheat	cytosol	95.56	95.56
HORVU1Hr1G020400.1	Barley	cytosol	95.56	95.44
TraesCS1D01G098500.3	Wheat	cytosol	95.43	95.43
TraesCS1A01G090000.1	Wheat	cytosol	95.3	95.3
EES19028	Sorghum	cytosol	91.67	91.67
GSMUA_AchrUn_...	Banana	cytosol	86.83	88.86
GSMUA_Achr7P03700_001	Banana	cytosol	88.44	88.44
VIT_05s0020g01320.t01	Wine grape	cytosol	87.63	87.63
GSMUA_Achr1P14740_001	Banana	cytosol	86.96	86.96
KRH02236	Soybean	cytosol, nucleus	85.75	85.75
KRH12127	Soybean	cytosol	85.35	85.35
KRH50876	Soybean	endoplasmic reticulum	85.35	85.35
KRH37131	Soybean	cytosol, nucleus	85.22	85.22
PGSC0003DMT400061802	Potato	cytosol	79.7	80.68
PGSC0003DMT400029607	Potato	cytosol	77.96	78.48
KRH15695	Soybean	cytosol	38.31	78.08
PGSC0003DMT400023105	Potato	cytosol	56.59	74.25
CDX91291	Canola	nucleus	11.96	72.95
PGSC0003DMT400023111	Potato	cytosol	72.04	72.63
PGSC0003DMT400022865	Potato	cytosol	71.64	72.52
PGSC0003DMT400038140	Potato	cytosol	20.43	66.96
KXG32508	Sorghum	cytosol	65.86	65.77
PGSC0003DMT400097727	Potato	cytosol	13.98	60.47
Solyc05g018040.1.1	Tomato	cytosol	20.16	59.76
PGSC0003DMT400085888	Potato	cytosol	10.08	54.35
KXG35165	Sorghum	cytosol	14.65	45.04
EES14624	Sorghum	cytosol	34.68	34.96
EES05529	Sorghum	cytosol	34.27	34.65
EES04173	Sorghum	cytosol	12.5	32.52
EER93338	Sorghum	plastid	31.59	28.18

Protein Annotations

Gene3D:1.10.10.10	Gene3D:1.10.10.2620	Gene3D:1.20.1310.10	MapMan:19.2.2.8.1.2	EntrezGene:8086363	UniProt:C5XKK4
InterPro:Cullin_CS	InterPro:Cullin_N	InterPro:Cullin_homology	InterPro:Cullin_homology_sf	InterPro:Cullin_neddylation_domain	InterPro:Cullin_repeat-like_dom_sf
EnsemblPlants:EES00748	ProteinID:EES00748	ProteinID:EES00748.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	GO:GO:0031461	GO:GO:0031625	GO:GO:0042787	GO:GO:0061630	InterPro:IPR016158
InterPro:IPR036388	PFAM:PF00888	PFAM:PF10557	ScanProsite:PS01256	PFscan:PS50069	PANTHER:PTHR11932
PANTHER:PTHR11932:SF97	SMART:SM00182	SMART:SM00884	EnsemblPlantsGene:SORBI_3003G164200	SUPFAM:SSF46785	SUPFAM:SSF74788
SUPFAM:SSF75632	unigene:Sbi.12326	UniParc:UPI0001A845BE	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	RefSeq:XP_002455628.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:20782968..20805566

Molecular Weight (calculated)

86979.7 Da

IEP (calculated)

7.280

GRAVY (calculated)

-0.487

Length

744 amino acids

Sequence
(BLAST)

001: MATHERKTID LEQGWEFMQK GITKLKNILE GKPEPQFSSE DYMMLYTTIY NMCTQKPPHD YSQQLYEKYR ESFEEYITSM VLPSLREKHD EFMLRELVKR
101: WSNHKVMVRW LSRFFHYLDR YFISRRSLPP LREVGLSCFR DLVYQEIKGK VKSAVISLID REREGEQIDR ALLKNVLDIF VEIGLGTMEC YENDFEDFLL
201: KDTADYYSIK AQSWILEDSC PDYMLKAEEC LKREKERVSH YLHSSSEQKL LEKVQHELLT QYASQLLEKE HSGCHALLRD DKVEDLSRMY RLFSRITRGL
301: EPVSQIFKQH VTNEGTALVK QAEDAASNKK PEKKDMVGLQ EQIFVRKIIE LHDKYVAYVT ECFQGHTLFH KALKEAFEVF CNKGVSGSSS AELLATFCDN
401: ILKKGGSEKL SDEAIEDTLE KVVRLLAYIS DKDLFAEFYR KKLARRLLFD KSANDEHERS ILTKLKQQCG GQFTSKMEGM VTDLTVARDH QTKFEEFISS
501: HPELNPGIDL AVTVLTTGFW PSYKSFDINL PSEMVKCVEV FKEFYQTRTK HRKLTLIYSL GTCNISAKFE AKTIELIVTT YQAALLLLFN GADRLSYSEI
601: VTQLNLSDDD VVRLLHSLSC AKYDILNKEP NNRSIAPNDV FEYNSKFTNK MRRIKIPLPP VDEKKKVVED VDKDRRYAID ASIVRIMKSR KVLGHQQLVM
701: ECVEQLGRMF KPDFKAIKKR IEDLITRDYL ERDKDNPNVY RYLA

Best Arabidopsis Sequence Match ( AT4G02570.4 )
(BLAST)

001: MERKTIDLEQ GWDYMQTGIT KLKRILEGLN EPAFDSEQYM MLYTTIYNMC TQKPPHDYSQ QLYDKYREAF EEYINSTVLP ALREKHDEFM LRELFKRWSN
101: HKVMVRWLSR FFYYLDRYFI ARRSLPPLNE VGLTCFRDLV YNELHSKVKQ AVIALVDKER EGEQIDRALL KNVLDIYVEI GMGQMERYEE DFESFMLQDT
201: SSYYSRKASS WIQEDSCPDY MLKSEECLKK ERERVAHYLH SSSEPKLVEK VQHELLVVFA SQLLEKEHSG CRALLRDDKV DDLSRMYRLY HKILRGLEPV
301: ANIFKQHVTA EGNALVQQAE DTATNQVANT ASVQEQVLIR KVIELHDKYM VYVTECFQNH TLFHKALKEA FEIFCNKTVA GSSSAELLAT FCDNILKKGG
401: SEKLSDEAIE DTLEKVVKLL AYISDKDLFA EFYRKKLARR LLFDRSANDD HERSILTKLK QQCGGQFTSK MEGMVTDLTL ARENQNSFED YLGSNPAANP
501: GIDLTVTVLT TGFWPSYKSF DINLPSEMIK CVEVFKGFYE TKTKHRKLTW IYSLGTCHIN GKFDQKAIEL IVSTYQAAVL LLFNTTDKLS YTEILAQLNL
601: SHEDLVRLLH SLSCAKYKIL LKEPNTKTVS QNDAFEFNSK FTDRMRRIKI PLPPVDERKK VVEDVDKDRR YAIDAAIVRI MKSRKVLGHQ QLVSECVEQL
701: SRMFKPDIKA IKKRMEDLIT RDYLERDKEN PNMFRYLA

Arabidopsis Description

CUL1AT4G02570 protein [Source:UniProtKB/TrEMBL;Acc:B9DGE3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.