Factsheet for GSMUA_AchrUn_randomP18580_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P03700_001	Banana	cytosol	96.84	94.62
GSMUA_Achr1P14740_001	Banana	cytosol	94.91	92.74
VIT_05s0020g01320.t01	Wine grape	cytosol	93.26	91.13
KRH12127	Soybean	cytosol	90.65	88.58
KRH02236	Soybean	cytosol, nucleus	90.51	88.44
KRH37131	Soybean	cytosol, nucleus	90.37	88.31
KRH50876	Soybean	endoplasmic reticulum	90.1	88.04
Os01t0369000-01	Rice	cytosol	89.0	86.96
EES00748	Sorghum	cytosol	88.86	86.83
TraesCS1B01G118000.1	Wheat	cytosol	88.45	86.42
HORVU1Hr1G020400.1	Barley	cytosol	88.45	86.31
TraesCS1D01G098500.3	Wheat	cytosol	88.31	86.29
TraesCS1A01G090000.1	Wheat	cytosol	88.17	86.16
EES19028	Sorghum	cytosol	85.69	83.74
Os05t0149600-02	Rice	cytosol, plasma membrane	29.71	83.4
KRH15695	Soybean	cytosol	41.54	82.74
PGSC0003DMT400061802	Potato	cytosol	83.49	82.58
Zm00001d010858_P007	Maize	cytosol	84.87	82.38
TraesCS1D01G098400.2	Wheat	cytosol	83.08	80.97
TraesCS1A01G089900.1	Wheat	cytosol, golgi	83.08	80.97
TraesCS1B01G117900.1	Wheat	cytosol	82.94	80.83
HORVU1Hr1G020390.1	Barley	cytosol	82.81	80.7
Zm00001d024855_P007	Maize	cytosol	84.18	78.97
PGSC0003DMT400029607	Potato	cytosol	79.78	78.48
PGSC0003DMT400023105	Potato	cytosol	59.42	76.19
PGSC0003DMT400023111	Potato	cytosol	75.24	74.12
PGSC0003DMT400022865	Potato	cytosol	74.14	73.33
CDX91291	Canola	nucleus	12.24	72.95
GSMUA_Achr1P26690_001	Banana	cytosol	70.7	68.99
PGSC0003DMT400038140	Potato	cytosol	21.05	67.4
GSMUA_Achr9P17620_001	Banana	cytosol	66.71	65.81
PGSC0003DMT400097727	Potato	cytosol	14.99	63.37
Solyc05g018040.1.1	Tomato	cytosol	21.87	63.35
PGSC0003DMT400085888	Potato	cytosol	10.18	53.62
GSMUA_AchrUn_...	Banana	cytosol	30.4	37.14
GSMUA_AchrUn_...	Banana	cytosol	35.49	36.44
GSMUA_Achr8P16990_001	Banana	cytosol	35.49	36.44
GSMUA_Achr7P18000_001	Banana	cytosol	35.35	36.3
GSMUA_Achr2P07360_001	Banana	mitochondrion	18.02	33.85
GSMUA_Achr4P22850_001	Banana	cytosol	32.87	29.76
GSMUA_Achr7P01270_001	Banana	cytosol	32.46	26.97

Protein Annotations

Gene3D:1.10.10.10	Gene3D:1.10.10.2620	Gene3D:1.20.1310.10	MapMan:19.2.2.8.1.2	ncoils:Coil	InterPro:Cullin_CS
InterPro:Cullin_N	InterPro:Cullin_homology	InterPro:Cullin_homology_sf	InterPro:Cullin_neddylation_domain	InterPro:Cullin_repeat-like_dom_sf	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0019538	GO:GO:0031461
GO:GO:0031625	EnsemblPlantsGene:GSMUA_AchrUn_randomG18580_001	EnsemblPlants:GSMUA_AchrUn_randomP18580_001	EnsemblPlants:GSMUA_AchrUn_randomT18580_001	InterPro:IPR016158	InterPro:IPR036388
UniProt:M0UAB7	PFAM:PF00888	PFAM:PF10557	ScanProsite:PS01256	PFscan:PS50069	PANTHER:PTHR11932
PANTHER:PTHR11932:SF97	SMART:SM00182	SMART:SM00884	SUPFAM:SSF46785	SUPFAM:SSF74788	SUPFAM:SSF75632
UniParc:UPI00029599D9	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	:	:	:

Description

Cullin-1 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG18580_001]

Coordinates

chrchrUn_random:+:89021520..89028883

Molecular Weight (calculated)

84800.9 Da

IEP (calculated)

7.212

GRAVY (calculated)

-0.481

Length

727 amino acids

Sequence
(BLAST)

001: MQKGITKLKN ILEGLPESQF SSEDYMMLYT TIYNMCTQKP PHDYSQQLYD KYRESFEEYI TSMVLPSLRE KHDEYMLREL VKRWLNHKVM VRWLSRFFHY
101: LDRYFVARRS LPPLNEVGLT CFRDLVYQEI KGKVKDAVIS LIDQEREGEQ IDRALLKNVL DIFVEIGLGN MECYENDFEA DLLKDTAAYY SRKASNWILE
201: DSCPDYMLKA EECLKREKDR VAHYLHSSSE QKLLEKVQHE LLFAYASQLL EKEHSGCHAL LRDDKVDDLS RMYRLFCRIP RGLDPVSQIF KQHVTSEGTA
301: LVKQAEDAAS NKKAEKRDVV GLQEQVFVRK VIELHDKYLA YVNDCFQNHS LFHKALKEAF EVFCNKGVAG SSSAELLATF CDNILKKGGS EKLSDEAIEE
401: TLEKVVKLLA YISDKDLFAE FYRKKLARRL LFDKSANDDH ERSILTKLKQ QCGGQFTSKM EGMVTDLTLA RENQSNFEDY LNSNPHANPG MDLTVTVLTT
501: GFWPSYKSFD LNLPAEMVKC VEVFREFYQT KTKHRKLTWI YSLGTCNING KFEPKTMELI VTTYQAATLL LFNASDRLSY SEIVTQLNLT DDDVVRLLHS
601: LSCAKYKILN KEPNTKSISP NDVFEFNSKF SDKMRRIKIP LPPVDEKKKV IEDVDQDRRY AIDASIVRIM KSRKVLGYQQ LVMECVEQLG RMFKPDFKAI
701: KKRMEDLITR DYLERDKDNP NLFRYLA

Best Arabidopsis Sequence Match ( AT4G02570.4 )
(BLAST)

001: MERKTIDLEQ GWDYMQTGIT KLKRILEGLN EPAFDSEQYM MLYTTIYNMC TQKPPHDYSQ QLYDKYREAF EEYINSTVLP ALREKHDEFM LRELFKRWSN
101: HKVMVRWLSR FFYYLDRYFI ARRSLPPLNE VGLTCFRDLV YNELHSKVKQ AVIALVDKER EGEQIDRALL KNVLDIYVEI GMGQMERYEE DFESFMLQDT
201: SSYYSRKASS WIQEDSCPDY MLKSEECLKK ERERVAHYLH SSSEPKLVEK VQHELLVVFA SQLLEKEHSG CRALLRDDKV DDLSRMYRLY HKILRGLEPV
301: ANIFKQHVTA EGNALVQQAE DTATNQVANT ASVQEQVLIR KVIELHDKYM VYVTECFQNH TLFHKALKEA FEIFCNKTVA GSSSAELLAT FCDNILKKGG
401: SEKLSDEAIE DTLEKVVKLL AYISDKDLFA EFYRKKLARR LLFDRSANDD HERSILTKLK QQCGGQFTSK MEGMVTDLTL ARENQNSFED YLGSNPAANP
501: GIDLTVTVLT TGFWPSYKSF DINLPSEMIK CVEVFKGFYE TKTKHRKLTW IYSLGTCHIN GKFDQKAIEL IVSTYQAAVL LLFNTTDKLS YTEILAQLNL
601: SHEDLVRLLH SLSCAKYKIL LKEPNTKTVS QNDAFEFNSK FTDRMRRIKI PLPPVDERKK VVEDVDKDRR YAIDAAIVRI MKSRKVLGHQ QLVSECVEQL
701: SRMFKPDIKA IKKRMEDLIT RDYLERDKEN PNMFRYLA

Arabidopsis Description

CUL1AT4G02570 protein [Source:UniProtKB/TrEMBL;Acc:B9DGE3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.