Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | cytosol | 65.81 | 66.71 |
| GSMUA_Achr7P03700_001 | Banana | cytosol | 66.49 | 65.86 |
| GSMUA_Achr1P14740_001 | Banana | cytosol | 66.35 | 65.73 |
| AT4G02570.1 | Thale cress | cytosol | 63.37 | 63.28 |
| Bra000874.1-P | Field mustard | cytosol | 62.96 | 62.87 |
| CDX90932 | Canola | cytosol | 62.96 | 62.87 |
| CDY18013 | Canola | cytosol | 62.96 | 62.87 |
| CDY22060 | Canola | cytosol | 62.82 | 62.74 |
| CDY21896 | Canola | cytosol | 62.69 | 62.6 |
| KRG96405 | Soybean | cytosol | 60.65 | 60.57 |
| KRH68142 | Soybean | cytosol | 60.65 | 60.32 |
| GSMUA_Achr1P26690_001 | Banana | cytosol | 56.31 | 55.7 |
| Solyc01g067170.1.1 | Tomato | mitochondrion, plastid | 9.91 | 54.48 |
| Bra036257.1-P | Field mustard | cytosol, nucleus, peroxisome | 62.55 | 46.75 |
| AT1G59790.1 | Thale cress | cytosol | 23.47 | 46.26 |
| Solyc01g067200.1.1 | Tomato | cytosol | 11.67 | 44.79 |
| GSMUA_AchrUn_... | Banana | cytosol | 26.73 | 33.11 |
| PGSC0003DMT400063662 | Potato | cytosol | 12.89 | 32.76 |
| Solyc01g099290.2.1 | Tomato | cytosol | 11.8 | 32.71 |
| GSMUA_Achr2P07360_001 | Banana | mitochondrion | 16.96 | 32.3 |
| GSMUA_AchrUn_... | Banana | cytosol | 30.94 | 32.2 |
| GSMUA_Achr8P16990_001 | Banana | cytosol | 30.66 | 31.92 |
| GSMUA_Achr7P18000_001 | Banana | cytosol | 30.66 | 31.92 |
| EES04173 | Sorghum | cytosol | 11.4 | 29.37 |
| GSMUA_Achr4P22850_001 | Banana | cytosol | 30.8 | 28.27 |
| Os05t0193900-00 | Rice | cytosol | 15.33 | 28.04 |
| Zm00001d042193_P001 | Maize | cytosol | 10.99 | 27.74 |
| HORVU3Hr1G098530.4 | Barley | cytosol | 10.85 | 26.58 |
| GSMUA_Achr7P01270_001 | Banana | cytosol | 31.48 | 26.51 |
| Os01t0935300-02 | Rice | cytosol | 10.58 | 26.0 |
| TraesCS3B01G497300.1 | Wheat | cytosol | 10.58 | 26.0 |
| TraesCS3D01G450200.1 | Wheat | cytosol | 10.45 | 25.67 |
| TraesCS3A01G457400.1 | Wheat | cytosol | 10.31 | 25.33 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:1.10.10.2620 | Gene3D:1.20.1310.10 | MapMan:19.2.2.8.1.2 | InterPro:Cullin_CS | InterPro:Cullin_N |
| InterPro:Cullin_homology | InterPro:Cullin_homology_sf | InterPro:Cullin_neddylation_domain | InterPro:Cullin_repeat-like_dom_sf | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006511 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0031461 | GO:GO:0031625 |
| EnsemblPlantsGene:GSMUA_Achr9G17620_001 | EnsemblPlants:GSMUA_Achr9P17620_001 | EnsemblPlants:GSMUA_Achr9T17620_001 | InterPro:IPR016158 | InterPro:IPR036388 | UniProt:M0U169 |
| PFAM:PF00888 | PFAM:PF10557 | ScanProsite:PS01256 | PFscan:PS50069 | PANTHER:PTHR11932 | PANTHER:PTHR11932:SF97 |
| SMART:SM00182 | SMART:SM00884 | SUPFAM:SSF46785 | SUPFAM:SSF74788 | SUPFAM:SSF75632 | UniParc:UPI0002948E83 |
| InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | : | : | : | : |
Description
Cullin-1 [Source:GMGC_GENE;Acc:GSMUA_Achr9G17620_001]
Coordinates
chr9:+:12222537..12228711
Molecular Weight (calculated)
86195.9 Da
IEP (calculated)
7.399
GRAVY (calculated)
-0.392
Length
737 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKIVDLEEG LELVQKGITK LTNILEGRAE PSFITDECMM LYTTIFNIAS RNHPQDHSQL LYDKYRELLE EYLTSEALPA LSEKHDEVML LELVHRWKNY
101: KVMVRWLTHF FFYINRYYIP RRSLTPLAEV GLNCFRQLVY QVLKDKVRDA VISLINRERD GEQVDKTLLK NVLNIFVEIG SGKTHYYETD FEAHMLRETS
201: TYYSQKASIW IVEDSCPDYM FKAEECLKRE KDRALHYLHE ISEPKLLQVF EDELLSPYTN QLLENETSGC HVLIRDNKVD DLSRMCRLFY KIASGMNLIS
301: EIIKQQVTAE LTVLMKQAED AASNKKQQTN PFHLLFQVLV RSVIELNAKY LAFSNDCFQN NSPLRKPLKE VFEVFCNKGF SGNSCVELLA TFCDHTLKKG
401: ATKNSSEAVE DTIEKTVKLL AYVNDKDLFA EIHRKKLARR LLFNRSAHDD YERSMLKKLE QQFGWQVTWK MEGMVTDMTL AREIQSSFEE YLKSNRQENP
501: GTDLSVTVLT TRFWPGYKSH DFNLPSELIK CVQAFKIFYE TTYRRKLTWL YSLGSCNINA KFGERTIELI VTTHQAAVLM LFNSADRLGY SEIKSQLAMT
601: DDEVTRLLHS LSCARYKILN KEPNSQSISR TDYFEFNSEF TEAMKRIKIP PPPVDERNKV IQDVDKGREY AIDAAIVRIM KNRKVIVYQQ LVVECMEHLN
701: HVFKPDIKAI KKRIEALITR EYLERDQKNP SIFRYLA
101: KVMVRWLTHF FFYINRYYIP RRSLTPLAEV GLNCFRQLVY QVLKDKVRDA VISLINRERD GEQVDKTLLK NVLNIFVEIG SGKTHYYETD FEAHMLRETS
201: TYYSQKASIW IVEDSCPDYM FKAEECLKRE KDRALHYLHE ISEPKLLQVF EDELLSPYTN QLLENETSGC HVLIRDNKVD DLSRMCRLFY KIASGMNLIS
301: EIIKQQVTAE LTVLMKQAED AASNKKQQTN PFHLLFQVLV RSVIELNAKY LAFSNDCFQN NSPLRKPLKE VFEVFCNKGF SGNSCVELLA TFCDHTLKKG
401: ATKNSSEAVE DTIEKTVKLL AYVNDKDLFA EIHRKKLARR LLFNRSAHDD YERSMLKKLE QQFGWQVTWK MEGMVTDMTL AREIQSSFEE YLKSNRQENP
501: GTDLSVTVLT TRFWPGYKSH DFNLPSELIK CVQAFKIFYE TTYRRKLTWL YSLGSCNINA KFGERTIELI VTTHQAAVLM LFNSADRLGY SEIKSQLAMT
601: DDEVTRLLHS LSCARYKILN KEPNSQSISR TDYFEFNSEF TEAMKRIKIP PPPVDERNKV IQDVDKGREY AIDAAIVRIM KNRKVIVYQQ LVVECMEHLN
701: HVFKPDIKAI KKRIEALITR EYLERDQKNP SIFRYLA
001: MERKTIDLEQ GWDYMQTGIT KLKRILEGLN EPAFDSEQYM MLYTTIYNMC TQKPPHDYSQ QLYDKYREAF EEYINSTVLP ALREKHDEFM LRELFKRWSN
101: HKVMVRWLSR FFYYLDRYFI ARRSLPPLNE VGLTCFRDLV YNELHSKVKQ AVIALVDKER EGEQIDRALL KNVLDIYVEI GMGQMERYEE DFESFMLQDT
201: SSYYSRKASS WIQEDSCPDY MLKSEECLKK ERERVAHYLH SSSEPKLVEK VQHELLVVFA SQLLEKEHSG CRALLRDDKV DDLSRMYRLY HKILRGLEPV
301: ANIFKQHVTA EGNALVQQAE DTATNQVANT ASVQEQVLIR KVIELHDKYM VYVTECFQNH TLFHKALKEA FEIFCNKTVA GSSSAELLAT FCDNILKKGG
401: SEKLSDEAIE DTLEKVVKLL AYISDKDLFA EFYRKKLARR LLFDRSANDD HERSILTKLK QQCGGQFTSK MEGMVTDLTL ARENQNSFED YLGSNPAANP
501: GIDLTVTVLT TGFWPSYKSF DINLPSEMIK CVEVFKGFYE TKTKHRKLTW IYSLGTCHIN GKFDQKAIEL IVSTYQAAVL LLFNTTDKLS YTEILAQLNL
601: SHEDLVRLLH SLSCAKYKIL LKEPNTKTVS QNDAFEFNSK FTDRMRRIKI PLPPVDERKK VVEDVDKDRR YAIDAAIVRI MKSRKVLGHQ QLVSECVEQL
701: SRMFKPDIKA IKKRMEDLIT RDYLERDKEN PNMFRYLA
101: HKVMVRWLSR FFYYLDRYFI ARRSLPPLNE VGLTCFRDLV YNELHSKVKQ AVIALVDKER EGEQIDRALL KNVLDIYVEI GMGQMERYEE DFESFMLQDT
201: SSYYSRKASS WIQEDSCPDY MLKSEECLKK ERERVAHYLH SSSEPKLVEK VQHELLVVFA SQLLEKEHSG CRALLRDDKV DDLSRMYRLY HKILRGLEPV
301: ANIFKQHVTA EGNALVQQAE DTATNQVANT ASVQEQVLIR KVIELHDKYM VYVTECFQNH TLFHKALKEA FEIFCNKTVA GSSSAELLAT FCDNILKKGG
401: SEKLSDEAIE DTLEKVVKLL AYISDKDLFA EFYRKKLARR LLFDRSANDD HERSILTKLK QQCGGQFTSK MEGMVTDLTL ARENQNSFED YLGSNPAANP
501: GIDLTVTVLT TGFWPSYKSF DINLPSEMIK CVEVFKGFYE TKTKHRKLTW IYSLGTCHIN GKFDQKAIEL IVSTYQAAVL LLFNTTDKLS YTEILAQLNL
601: SHEDLVRLLH SLSCAKYKIL LKEPNTKTVS QNDAFEFNSK FTDRMRRIKI PLPPVDERKK VVEDVDKDRR YAIDAAIVRI MKSRKVLGHQ QLVSECVEQL
701: SRMFKPDIKA IKKRMEDLIT RDYLERDKEN PNMFRYLA
Arabidopsis Description
CUL1AT4G02570 protein [Source:UniProtKB/TrEMBL;Acc:B9DGE3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.