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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:secretory
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr2P06520_001
GSMUA_Achr2P12630_001
GSMUA_Achr2P23180_001
GSMUA_Achr3P13610_001
GSMUA_Achr3P16300_001
GSMUA_Achr4P05200_001
GSMUA_Achr4P21020_001
GSMUA_Achr4P21030_001
GSMUA_Achr4P22520_001
GSMUA_Achr4P22530_001
GSMUA_Achr5P03110_001
GSMUA_Achr5P09310_001
GSMUA_Achr6P08850_001
GSMUA_Achr7P13680_001
GSMUA_Achr8P20610_001
GSMUA_Achr8P20620_001
GSMUA_Achr9P10690_001
GSMUA_Achr9P10700_001
GSMUA_Achr9P17620_001
GSMUA_Achr9P24330_001
GSMUA_Achr9P25550_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G62980.1 GSMUA_Achr10P... AT1G04250.1 11713520
AT3G62980.1 GSMUA_Achr4P21020_001 AT1G04250.1 11713520
AT3G62980.1 GSMUA_Achr4P22520_001 AT1G04250.1 11713520
AT3G62980.1 GSMUA_Achr8P20610_001 AT1G04250.1 11713520
AT3G62980.1 GSMUA_Achr9P10700_001 AT1G04250.1 11713520
AT3G62980.1 GSMUA_Achr9P25550_001 AT1G04250.1 11713520
AT3G62980.1 GSMUA_Achr10P... AT3G23050.1 11713520
AT3G62980.1 GSMUA_Achr4P21020_001 AT3G23050.1 11713520
AT3G62980.1 GSMUA_Achr4P22520_001 AT3G23050.1 11713520
AT3G62980.1 GSMUA_Achr8P20610_001 AT3G23050.1 11713520
AT3G62980.1 GSMUA_Achr9P10700_001 AT3G23050.1 11713520
AT3G62980.1 GSMUA_Achr9P25550_001 AT3G23050.1 11713520
AT3G62980.1 GSMUA_Achr11P... AT4G14560.1 15546359
AT3G62980.1 GSMUA_Achr2P12630_001 AT4G14560.1 15546359
AT3G62980.1 GSMUA_Achr4P05200_001 AT4G14560.1 15546359
AT3G62980.1 GSMUA_Achr4P21030_001 AT4G14560.1 15546359
AT3G62980.1 GSMUA_Achr4P22530_001 AT4G14560.1 15546359
AT3G62980.1 GSMUA_Achr5P03110_001 AT4G14560.1 15546359
AT3G62980.1 GSMUA_Achr8P20620_001 AT4G14560.1 15546359
AT3G62980.1 GSMUA_Achr9P10690_001 AT4G14560.1 15546359
AT3G62980.1 GSMUA_Achr9P24330_001 AT4G14560.1 15546359
AT3G62980.1 GSMUA_Achr2P23180_001 AT4G36800.1 12682009
AT3G62980.1 GSMUA_Achr3P13610_001 AT4G36800.1 12682009
AT3G62980.1 GSMUA_Achr6P08850_001 AT4G36800.1 12682009
AT3G62980.1 GSMUA_Achr2P06520_001 AT5G63110.1 12445118
AT3G62980.1 GSMUA_AchrUn_... AT5G63110.1 12445118
AT4G03190.1 GSMUA_Achr10P... AT3G23050.1 15992545
AT4G03190.1 GSMUA_Achr4P21020_001 AT3G23050.1 15992545
AT4G03190.1 GSMUA_Achr4P22520_001 AT3G23050.1 15992545
AT4G03190.1 GSMUA_Achr8P20610_001 AT3G23050.1 15992545
AT4G03190.1 GSMUA_Achr9P10700_001 AT3G23050.1 15992545
AT4G03190.1 GSMUA_Achr9P25550_001 AT3G23050.1 15992545
AT4G03190.1 GSMUA_Achr9P17620_001 AT4G02570.1 15992545
AT4G03190.1 GSMUA_Achr3P16300_001 AT5G25890.1 21734647
AT4G03190.1 GSMUA_Achr5P09310_001 AT5G25890.1 21734647
AT4G03190.1 GSMUA_Achr7P13680_001 AT5G25890.1 21734647
AT4G03190.1 GSMUA_AchrUn_... AT5G25890.1 21734647
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc06g008470.1.1 Tomato extracellular 8.62 70.18
GSMUA_Achr3P23850_001 Banana cytosol 86.21 68.73
Solyc06g008440.1.1 Tomato extracellular 9.27 67.19
PGSC0003DMT400053430 Potato cytosol 38.36 66.17
PGSC0003DMT400093216 Potato mitochondrion 21.77 66.01
Solyc06g008460.1.1 Tomato extracellular 30.39 59.49
Solyc06g008810.2.1 Tomato cytosol 53.66 59.14
Os05t0150500-00 Rice plastid 72.84 57.58
KXG21312 Sorghum plastid 73.06 57.36
Zm00001d010863_P001 Maize plastid 72.84 57.29
PGSC0003DMT400008765 Potato cytosol 13.15 57.01
GSMUA_Achr6P20580_001 Banana cytosol 61.21 56.8
TraesCS1B01G119100.1 Wheat cytosol, peroxisome, plastid 71.12 56.03
TraesCS1A01G091300.1 Wheat cytosol 71.34 55.91
VIT_07s0104g01320.t01 Wine grape cytosol 69.18 55.73
KRH68108 Soybean cytosol 69.83 55.29
KRG96377 Soybean cytosol 69.83 55.2
TraesCS1D01G099900.1 Wheat cytosol 71.34 55.17
PGSC0003DMT400013682 Potato cytosol, mitochondrion 16.59 55.0
GSMUA_Achr10P... Banana cytosol 63.15 54.97
GSMUA_AchrUn_... Banana cytosol 62.93 54.78
PGSC0003DMT400029517 Potato cytosol 68.32 54.56
VIT_12s0035g00130.t01 Wine grape cytosol, extracellular, nucleus 17.24 54.42
KRH71533 Soybean cytosol 68.53 54.36
KRH31921 Soybean cytosol 68.32 54.19
Solyc09g074520.2.1 Tomato cytosol 67.46 53.87
GSMUA_Achr6P08000_001 Banana cytosol 61.64 53.66
CDY53998 Canola cytosol 67.24 53.42
GSMUA_Achr6P16510_001 Banana cytosol 61.21 53.28
VIT_14s0030g01240.t01 Wine grape cytosol 66.38 53.01
PGSC0003DMT400061752 Potato plastid 65.73 52.59
CDY68868 Canola cytosol 60.99 52.41
GSMUA_Achr9P01140_001 Banana cytosol 60.13 52.35
Bra003518.1-P Field mustard cytosol 66.81 52.19
CDY11468 Canola cytosol 66.81 52.1
Bra007720.1-P Field mustard cytosol 66.81 52.1
PGSC0003DMT400056570 Potato cytosol 66.38 51.85
Solyc05g009260.1.1 Tomato extracellular 9.05 51.85
AT3G62980.1 Thale cress cytosol 66.38 51.85
CDX76680 Canola cytosol 66.38 51.76
AT4G03190.1 Thale cress cytosol, plastid 64.22 50.94
HORVU1Hr1G021550.4 Barley cytosol 70.26 50.78
Bra000842.1-P Field mustard cytosol 62.28 49.32
CDY53774 Canola cytosol 62.28 49.32
Bra034191.1-P Field mustard cytosol 62.07 49.23
CDX90899 Canola cytosol 62.07 49.15
Solyc06g008780.1.1 Tomato extracellular 51.51 48.19
CDX67912 Canola endoplasmic reticulum, golgi 66.81 48.06
CDY21947 Canola plastid, vacuole 61.64 45.69
CDY22108 Canola endoplasmic reticulum, golgi, plastid, vacuole 62.07 45.07
Solyc06g007840.2.1 Tomato extracellular, plastid 7.76 43.9
Solyc06g007830.1.1 Tomato endoplasmic reticulum, extracellular 10.78 43.86
Bra014378.1-P Field mustard cytosol 58.41 43.29
CDX89163 Canola cytosol 58.19 43.13
GSMUA_Achr3P06710_001 Banana cytosol 49.57 40.14
GSMUA_Achr5P05520_001 Banana cytosol 48.71 38.5
GSMUA_Achr7P11780_001 Banana cytosol 48.71 38.31
Solyc06g084490.1.1 Tomato plastid 10.34 22.86
GSMUA_Achr5P28930_001 Banana cytosol 27.16 22.5
GSMUA_Achr6P33630_001 Banana cytosol, mitochondrion, nucleus 27.16 21.61
GSMUA_Achr9P03690_001 Banana cytosol 28.02 21.56
GSMUA_Achr8P02350_001 Banana cytosol 4.53 12.21
Protein Annotations
EnsemblPlants:GSMUA_Achr5P26930_001EnsemblPlants:GSMUA_Achr5T26930_001EnsemblPlantsGene:GSMUA_Achr5G26930_001Gene3D:3.80.10.10InterPro:IPR032675InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt_Cys-con_subtypPANTHER:PTHR43944PANTHER:PTHR43944:SF7SMART:SM00367SUPFAM:SSF52047UniParc:UPI000295A81E
UniProt:M0T218MapMan:11.2.2.1.1MapMan:19.2.2.8.1.4.6:::
Description
Transport inhibitor response 1-like protein Os05g0150500 [Source:GMGC_GENE;Acc:GSMUA_Achr5G26930_001]
Coordinates
chr5:+:27572361..27577313
Molecular Weight (calculated)
51415.4 Da
IEP (calculated)
6.181
GRAVY (calculated)
0.127
Length
464 amino acids
Sequence
(BLAST)
001: MVVSDDCLEL IARSFKNFGV LSLVSCDGFS TAGLAAIAAN CRNLRELDLH ENEVEDNCLN WISHFPESFT SLVSLNIACL EGDVNTSVLE CLISRCPNLR
101: TLRLNHAMPL EKLVSLLQRA PQLMDLGTSK FSADHHPELF FKLESTFAGF KHLKSLSGIW EAGPAYLPAI YSVCESLTSL NLCYATIQSP ELFKLVSRCK
201: NLQRLWVMDL IEDNGLIAVA ASCKLLQELR VFPSDPYGVA PPISLTEHGL VAISAGCLML HSVLYFCRQM TNAALLTIAN NRPNLTCFRL CIIEPHTPDY
301: ISQEPLDAGF SAIVESCKDL RRLSLSGLLT DRVFKSIGAS ANRLEMLSVA FAGDSDAGLH YILSGCKNLR KLEIRDCPFG DKALLDNASK LETMRSLWMS
401: SCSVTLGACR QLALKMPRLN VEVIDERRGR PLESWPDDFP VEKLYIYRTV AGPRSDTPPC VWTV
Best Arabidopsis Sequence Match ( AT3G62980.1 )
(BLAST)
001: MQKRIALSFP EEVLEHVFSF IQLDKDRNSV SLVCKSWYEI ERWCRRKVFI GNCYAVSPAT VIRRFPKVRS VELKGKPHFA DFNLVPDGWG GYVYPWIEAM
101: SSSYTWLEEI RLKRMVVTDD CLELIAKSFK NFKVLVLSSC EGFSTDGLAA IAATCRNLKE LDLRESDVDD VSGHWLSHFP DTYTSLVSLN ISCLASEVSF
201: SALERLVTRC PNLKSLKLNR AVPLEKLATL LQRAPQLEEL GTGGYTAEVR PDVYSGLSVA LSGCKELRCL SGFWDAVPAY LPAVYSVCSR LTTLNLSYAT
301: VQSYDLVKLL CQCPKLQRLW VLDYIEDAGL EVLASTCKDL RELRVFPSEP FVMEPNVALT EQGLVSVSMG CPKLESVLYF CRQMTNAALI TIARNRPNMT
401: RFRLCIIEPK APDYLTLEPL DIGFGAIVEH CKDLRRLSLS GLLTDKVFEY IGTYAKKMEM LSVAFAGDSD LGMHHVLSGC DSLRKLEIRD CPFGDKALLA
501: NASKLETMRS LWMSSCSVSF GACKLLGQKM PKLNVEVIDE RGAPDSRPES CPVERVFIYR TVAGPRFDMP GFVWNMDQDS TMRFSRQIIT TNGL
Arabidopsis Description
TIR1TIR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VA54]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.