Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000842.1-P | Field mustard | cytosol | 84.79 | 84.64 |
| CDX90899 | Canola | cytosol | 84.44 | 84.3 |
| Bra034191.1-P | Field mustard | cytosol | 83.93 | 83.93 |
| CDY53774 | Canola | cytosol | 83.93 | 83.79 |
| CDY21947 | Canola | plastid, vacuole | 83.59 | 78.11 |
| CDY22108 | Canola | endoplasmic reticulum, golgi, plastid, vacuole | 83.93 | 76.84 |
| AT3G62980.1 | Thale cress | cytosol | 68.89 | 67.85 |
| GSMUA_Achr5P26930_001 | Banana | cytosol | 50.94 | 64.22 |
| GSMUA_Achr3P23850_001 | Banana | cytosol | 60.85 | 61.17 |
| KXG21312 | Sorghum | plastid | 59.83 | 59.22 |
| Os05t0150500-00 | Rice | plastid | 59.15 | 58.94 |
| Zm00001d010863_P001 | Maize | plastid | 59.32 | 58.81 |
| TraesCS1B01G119100.1 | Wheat | cytosol, peroxisome, plastid | 58.46 | 58.06 |
| TraesCS1A01G091300.1 | Wheat | cytosol | 58.63 | 57.94 |
| TraesCS1D01G099900.1 | Wheat | cytosol | 58.46 | 57.0 |
| AT3G26810.1 | Thale cress | cytosol | 54.53 | 55.48 |
| AT1G12820.1 | Thale cress | cytosol | 54.19 | 54.94 |
| HORVU1Hr1G021550.4 | Barley | cytosol | 57.61 | 52.49 |
| AT5G49980.1 | Thale cress | nucleus | 48.72 | 46.04 |
| AT4G24390.1 | Thale cress | cytosol, plastid | 46.5 | 43.66 |
| AT2G39940.1 | Thale cress | cytosol | 30.26 | 29.9 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:11.2.2.1.1 | MapMan:19.2.2.8.1.4.6 | Gene3D:3.80.10.10 | EntrezGene:828045 | UniProt:A0A178UXT3 |
| ProteinID:AAD14447.1 | ProteinID:AEE82287.1 | EMBL:AF291816 | ArrayExpress:AT4G03190 | EnsemblPlantsGene:AT4G03190 | RefSeq:AT4G03190 |
| TAIR:AT4G03190 | RefSeq:AT4G03190-TAIR-G | EnsemblPlants:AT4G03190.1 | TAIR:AT4G03190.1 | EMBL:AY045799 | EMBL:AY150427 |
| ProteinID:CAB77804.1 | InterPro:F-box_dom | GO:GO:0000822 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006464 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009605 | GO:GO:0009719 |
| GO:GO:0009733 | GO:GO:0009734 | GO:GO:0009987 | GO:GO:0009991 | GO:GO:0010011 | GO:GO:0010152 |
| GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019005 | GO:GO:0019538 | GO:GO:0045014 | Symbol:GRH1 |
| InterPro:IPR001810 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt_Cys-con_subtyp | RefSeq:NP_567255.1 | ProteinID:OAO97914.1 |
| PO:PO:0000013 | PO:PO:0000014 | PO:PO:0000026 | PO:PO:0000027 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001180 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0009066 |
| PO:PO:0009067 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR43944 | PANTHER:PTHR43944:SF7 | UniProt:Q9ZR12 | SMART:SM00256 | SMART:SM00367 |
| SUPFAM:SSF52047 | UniParc:UPI00000AC5D9 | SEG:seg | : | : | : |
Description
GRH1GRR1-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZR12]
Coordinates
chr4:-:1404887..1407402
Molecular Weight (calculated)
65651.8 Da
IEP (calculated)
7.882
GRAVY (calculated)
-0.065
Length
585 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLRFPPKVL EHILSFIDSN EDRNSVSLVC KSWFETERKT RKRVFVGNCY AVSPAAVTRR FPEMRSLTLK GKPHFADYNL VPDGWGGYAW PWIEAMAAKS
101: SSLEEIRMKR MVVTDECLEK IAASFKDFKV LVLTSCEGFS TDGIAAIAAT CRNLRVLELR ECIVEDLGGD WLSYFPESST SLVSLDFSCL DSEVKISDLE
201: RLVSRSPNLK SLKLNPAVTL DGLVSLLRCA PQLTELGTGS FAAQLKPEAF SKLSEAFSNC KQLQSLSGLW DVLPEYLPAL YSVCPGLTSL NLSYATVRMP
301: DLVELLRRCS KLQKLWVMDL IEDKGLEAVA SYCKELRELR VFPSEPDLDA TNIPLTEQGL VFVSKGCRKL ESVLYFCVQF TNAALFTIAR KRPNLKCFRL
401: CVIEPFAPDY KTNEPLDKGF KAIAEGCRDL RRLSVSGLLS DKAFKYIGKH AKKVRMLSIA FAGDSDLMLH HLLSGCESLK KLEIRDCPFG DTALLEHAAK
501: LETMRSLWMS SCFVSFGACK LLSQKMPRLN VEVIDEHPPE SRPESSPVER IYIYRTVAGP RMDTPEFVWT IHKNPENGVS HLAIK
101: SSLEEIRMKR MVVTDECLEK IAASFKDFKV LVLTSCEGFS TDGIAAIAAT CRNLRVLELR ECIVEDLGGD WLSYFPESST SLVSLDFSCL DSEVKISDLE
201: RLVSRSPNLK SLKLNPAVTL DGLVSLLRCA PQLTELGTGS FAAQLKPEAF SKLSEAFSNC KQLQSLSGLW DVLPEYLPAL YSVCPGLTSL NLSYATVRMP
301: DLVELLRRCS KLQKLWVMDL IEDKGLEAVA SYCKELRELR VFPSEPDLDA TNIPLTEQGL VFVSKGCRKL ESVLYFCVQF TNAALFTIAR KRPNLKCFRL
401: CVIEPFAPDY KTNEPLDKGF KAIAEGCRDL RRLSVSGLLS DKAFKYIGKH AKKVRMLSIA FAGDSDLMLH HLLSGCESLK KLEIRDCPFG DTALLEHAAK
501: LETMRSLWMS SCFVSFGACK LLSQKMPRLN VEVIDEHPPE SRPESSPVER IYIYRTVAGP RMDTPEFVWT IHKNPENGVS HLAIK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.