Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G011280.4 | Barley | cytosol, endoplasmic reticulum, peroxisome | 44.6 | 86.32 |
| Os02t0167700-01 | Rice | plasma membrane | 84.57 | 85.47 |
| VIT_12s0035g01840.t01 | Wine grape | cytosol | 83.92 | 84.81 |
| EES06334 | Sorghum | cytosol | 83.92 | 84.74 |
| TraesCS5D01G057500.1 | Wheat | cytosol | 83.35 | 84.17 |
| TraesCS5A01G046900.1 | Wheat | golgi | 83.1 | 83.92 |
| TraesCS5B01G051900.1 | Wheat | cytosol | 83.02 | 83.84 |
| KRH51281 | Soybean | endoplasmic reticulum | 81.97 | 82.91 |
| TraesCS2D01G036800.1 | Wheat | cytosol | 82.05 | 82.85 |
| TraesCS2A01G037800.2 | Wheat | cytosol, unclear | 81.97 | 82.77 |
| KRH01878 | Soybean | endoplasmic reticulum | 81.88 | 82.76 |
| HORVU2Hr1G005650.6 | Barley | cytosol | 81.8 | 82.61 |
| TraesCS2B01G051000.1 | Wheat | cytosol, golgi | 81.56 | 82.36 |
| Solyc01g103010.2.1 | Tomato | cytosol | 80.99 | 81.92 |
| Zm00001d053813_P002 | Maize | mitochondrion | 83.43 | 80.87 |
| CDY09359 | Canola | cytosol | 77.25 | 78.14 |
| Bra026586.1-P | Field mustard | cytosol | 77.25 | 78.14 |
| AT2G02560.1 | Thale cress | cytosol | 76.93 | 77.69 |
| CDY41685 | Canola | cytosol | 77.58 | 77.64 |
| CDY03047 | Canola | cytosol | 76.77 | 77.02 |
| Bra024815.1-P | Field mustard | cytosol | 76.36 | 76.86 |
| CDY45206 | Canola | cytosol | 75.55 | 76.61 |
| HORVU7Hr1G036210.1 | Barley | endoplasmic reticulum, plastid | 4.31 | 75.71 |
| KRH75237 | Soybean | cytosol, endoplasmic reticulum, golgi, plastid | 19.98 | 75.69 |
| HORVU0Hr1G010280.1 | Barley | plastid | 6.42 | 74.53 |
| HORVU1Hr1G041480.1 | Barley | cytosol | 5.36 | 74.16 |
| Os02t0169800-01 | Rice | cytosol, plasma membrane | 18.77 | 73.57 |
| TraesCS5D01G419100.1 | Wheat | nucleus | 63.04 | 73.14 |
| HORVU1Hr1G041490.1 | Barley | cytosol | 3.33 | 71.93 |
| HORVU5Hr1G059250.1 | Barley | cytosol | 3.9 | 68.57 |
| TraesCS5A01G409300.1 | Wheat | cytosol | 53.29 | 52.52 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P10890_001 | EnsemblPlants:GSMUA_Achr10T10890_001 | EnsemblPlantsGene:GSMUA_Achr10G10890_001 | GO:GO:0003674 | GO:GO:0005488 | InterPro:ARM-type_fold |
| InterPro:TATA-bd_TIP120 | PANTHER:PTHR12696 | PANTHER:PTHR12696:SF0 | PFAM:PF08623 | SEG:seg | SUPFAM:SSF48371 |
| UniParc:UPI000295B3FA | UniProt:M0RH65 | MapMan:19.2.2.8.1.5 | : | : | : |
Description
Cullin-associated NEDD8-dissociated protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr10G10890_001]
Coordinates
chr10:+:20546572..20564514
Molecular Weight (calculated)
136344.0 Da
IEP (calculated)
5.510
GRAVY (calculated)
-0.021
Length
1231 amino acids
Sequence
(BLAST)
(BLAST)
0001: MANISITNIL EKMTGKDKDY RYMATSDLLN ELNKEGFKSD SDLEMKLTSA VLQQLEDAAG DVSGLAVKCL APLVKKISED RILEMANKLC DKLLNGKDQH
0101: RDIASIALKT IVSEVNTTSL AQRILASLGP QLIEGITNPG KSTEIKCECL DILGDMLQRF GNLMTKDAHE ELLSALLSQL GSNQASVRKK SILCIASLAS
0201: SLSDDLLAKA TFEVVQLLKS KNIKPELTRT NIQMIGALSR SVGYRFGPHL GDSVPLLINY CMTASESDEE LREYSLQALE SFLLRCPRDI SPYCDDILIL
0301: TMEYLSYDPN FTDNMEEDTD AEGDDEEEDD ESANEYTDDE DASWKVRRAA AKCLQAIIMS RPEMLIKLYY EACEACPKLI ERFKEREENV KMDVFNTFIE
0401: LLRQTGNVTK GQVDIDESRQ VVIPFPRWLL NQEVPKIVKS VNRQLREKSV KTKVGAFSVL KELVVVLPNC LAEHIGSLVS GIEKALTDKS STSNLKIEAL
0501: VFTRLVMASH SPSVFHPYIK ALSSPVLSAV GERYYKVTAE ALRVCGELVR VLRPNFETST LDFKPYINPI YNAILARLAN QDQDQEVKEC AISCMSLVIS
0601: TFGDNLQRDL PACLPILVDR MGNEITRLTA VKAFAVIANS PLRIDLSCVL EQVVSELTAF LRKANRALRQ ATLGTLNSLV VAYGEQITSS AYEVIIVELS
0701: TLISEADLHM TALALELCCT MMTDRISSQS VGLTVRHKVL PQALILIRSS LLQGQALQAL QRFFASLVHS ANTSFDALLD SLLSSAKPSP QSGGLAKQAL
0801: YSIAQCVAVL CLAAGDQKCA STVEMLKGIL KDDSSMNSAK QHLALLCLGE IGRRKDLSMH VHIENIVIES FQSPFEEIKS AASYALGNIA VGNLSKYLPF
0901: ILDQIDNQQK KQYLLLHSLK EVIARHSIDQ TGQSEFQESN VEKILNLLFN HCESDEEGVR NVVAECLGKI ALIEPKKLVP ALKERTASPT AFTRATVVVA
1001: VKYSIVERPE KIDEILYPEF STFLMLIKDS DRHVRRAAVL ALSTAAHNKP NLIKGLLPEL LPLLYDQTVI KKELIRTVDL GPFKHVVDDG LELRKAAFEC
1101: VDTLLDGCLD QMNPSSFIVP YLISGLGDHY DVKMPCHLIL SKLADKCPSA VLAVLDSLVD PLEKTINHKP KADAVKQEVD RNEDMIRSAL RAIASISRIS
1201: GGDYSLKFKM LMNNIMSTAS LAEKYHFVRS E
0101: RDIASIALKT IVSEVNTTSL AQRILASLGP QLIEGITNPG KSTEIKCECL DILGDMLQRF GNLMTKDAHE ELLSALLSQL GSNQASVRKK SILCIASLAS
0201: SLSDDLLAKA TFEVVQLLKS KNIKPELTRT NIQMIGALSR SVGYRFGPHL GDSVPLLINY CMTASESDEE LREYSLQALE SFLLRCPRDI SPYCDDILIL
0301: TMEYLSYDPN FTDNMEEDTD AEGDDEEEDD ESANEYTDDE DASWKVRRAA AKCLQAIIMS RPEMLIKLYY EACEACPKLI ERFKEREENV KMDVFNTFIE
0401: LLRQTGNVTK GQVDIDESRQ VVIPFPRWLL NQEVPKIVKS VNRQLREKSV KTKVGAFSVL KELVVVLPNC LAEHIGSLVS GIEKALTDKS STSNLKIEAL
0501: VFTRLVMASH SPSVFHPYIK ALSSPVLSAV GERYYKVTAE ALRVCGELVR VLRPNFETST LDFKPYINPI YNAILARLAN QDQDQEVKEC AISCMSLVIS
0601: TFGDNLQRDL PACLPILVDR MGNEITRLTA VKAFAVIANS PLRIDLSCVL EQVVSELTAF LRKANRALRQ ATLGTLNSLV VAYGEQITSS AYEVIIVELS
0701: TLISEADLHM TALALELCCT MMTDRISSQS VGLTVRHKVL PQALILIRSS LLQGQALQAL QRFFASLVHS ANTSFDALLD SLLSSAKPSP QSGGLAKQAL
0801: YSIAQCVAVL CLAAGDQKCA STVEMLKGIL KDDSSMNSAK QHLALLCLGE IGRRKDLSMH VHIENIVIES FQSPFEEIKS AASYALGNIA VGNLSKYLPF
0901: ILDQIDNQQK KQYLLLHSLK EVIARHSIDQ TGQSEFQESN VEKILNLLFN HCESDEEGVR NVVAECLGKI ALIEPKKLVP ALKERTASPT AFTRATVVVA
1001: VKYSIVERPE KIDEILYPEF STFLMLIKDS DRHVRRAAVL ALSTAAHNKP NLIKGLLPEL LPLLYDQTVI KKELIRTVDL GPFKHVVDDG LELRKAAFEC
1101: VDTLLDGCLD QMNPSSFIVP YLISGLGDHY DVKMPCHLIL SKLADKCPSA VLAVLDSLVD PLEKTINHKP KADAVKQEVD RNEDMIRSAL RAIASISRIS
1201: GGDYSLKFKM LMNNIMSTAS LAEKYHFVRS E
0001: MANLQVSGIL EKMTGKDKDY RYMATSDLLN ELNKDSFKID LDLEVRLSSI ILQQLDDVAG DVSGLAVKCL APLVKKVGEE RIVEMTNKLC DKLLHGKDQH
0101: RDTASIALRT VVAQIAPTLA PSILVTLTPQ MIGGISGQGM SSGIKCECLE IMCDVVQKYG SLMTDDHEKL LNTLLLQLGC NQATVRKKTV TCIASLASSL
0201: SDDLLAKATV EVVKNLSNRN AKSEITRTNI QMIGALCRAV GYRFGTHLGN TVPVLINYCT SASENDEELR EYSLQALESF LLRCPRDISP YCDEILNLTL
0301: EYISYDPNFT DNMEEDTDNE TLEDEEDDES ANEYTDDEDA SWKVRRAAAK CLAGLIVSRS EMLTKVYQEA CPKLIDRFKE REENVKMDVF NTFIDLLRQT
0401: GNVTKGQTDT DESSPKWLLK QEVSKIVKSI NRQLREKSVK TKVGAFSVLR ELVVVLPDCL ADHIGSLVPG IERALNDKSS TSNLKIEALV FTKLVLASHA
0501: PPVFHPYIKA LSSPVLAAVG ERYYKVTAEA LRVCGELVRV VRPSTAGMGF DFKPFVHPIY NAIMSRLTNQ DQDQEVKECA ITCMGLVIST FGDQLRAELP
0601: SCLPVLVDRM GNEITRLTAV KAFSVIATSP LHINLSCVLD HLIAELTGFL RKANRVLRQA TLITMNTLVT AYGDKIGSEA YEVILVELSS LISVSDLHMT
0701: ALALELCCTL MTGKSCSENI SLAVRNKVLP QALTLVKSPL LQGQALLDLQ KFFEALVYHA NTSFYTLLES LLSCAKPSPQ SGGVPKQALY SIAQCVAVLC
0801: LAAGDKNCSS TVKMLMEILK DDSGTNSAKQ HLALLSLGEI GRRKDLSAHA GIETIVIESF QSPFEEIKSA ASYALGNIAV GNLSNYLPFI LDQIDNQQKK
0901: QYILLHSLKE VIVRQSVDKA DFQNSSVEKI LALLFNHCES EEEGVRNVVA ECLGKMALIE PEKLVPALQV RTTSPAAFTR ATVVTAVKYS VVERPEKLDE
1001: IIFPQISSFL MLIKDGDRHV RRAAVSALST FAHYKPNLIK GLLPELLPLL YDQTVIKKEL IRTVDLGPFK HVVDDGLELR KAAFECVFTL VDSCLDQVNP
1101: SSFIVPFLKS GLEDHYDLKM LCHLILSLLA DKCPSAVLAV LDSLVEPLHK TISFKPKQDA VKQEHDRNED MIRSALRAIS SLDRINGVDY SHKFKGLMGD
1201: MKRSVPLWEK FQTIRNE
0101: RDTASIALRT VVAQIAPTLA PSILVTLTPQ MIGGISGQGM SSGIKCECLE IMCDVVQKYG SLMTDDHEKL LNTLLLQLGC NQATVRKKTV TCIASLASSL
0201: SDDLLAKATV EVVKNLSNRN AKSEITRTNI QMIGALCRAV GYRFGTHLGN TVPVLINYCT SASENDEELR EYSLQALESF LLRCPRDISP YCDEILNLTL
0301: EYISYDPNFT DNMEEDTDNE TLEDEEDDES ANEYTDDEDA SWKVRRAAAK CLAGLIVSRS EMLTKVYQEA CPKLIDRFKE REENVKMDVF NTFIDLLRQT
0401: GNVTKGQTDT DESSPKWLLK QEVSKIVKSI NRQLREKSVK TKVGAFSVLR ELVVVLPDCL ADHIGSLVPG IERALNDKSS TSNLKIEALV FTKLVLASHA
0501: PPVFHPYIKA LSSPVLAAVG ERYYKVTAEA LRVCGELVRV VRPSTAGMGF DFKPFVHPIY NAIMSRLTNQ DQDQEVKECA ITCMGLVIST FGDQLRAELP
0601: SCLPVLVDRM GNEITRLTAV KAFSVIATSP LHINLSCVLD HLIAELTGFL RKANRVLRQA TLITMNTLVT AYGDKIGSEA YEVILVELSS LISVSDLHMT
0701: ALALELCCTL MTGKSCSENI SLAVRNKVLP QALTLVKSPL LQGQALLDLQ KFFEALVYHA NTSFYTLLES LLSCAKPSPQ SGGVPKQALY SIAQCVAVLC
0801: LAAGDKNCSS TVKMLMEILK DDSGTNSAKQ HLALLSLGEI GRRKDLSAHA GIETIVIESF QSPFEEIKSA ASYALGNIAV GNLSNYLPFI LDQIDNQQKK
0901: QYILLHSLKE VIVRQSVDKA DFQNSSVEKI LALLFNHCES EEEGVRNVVA ECLGKMALIE PEKLVPALQV RTTSPAAFTR ATVVTAVKYS VVERPEKLDE
1001: IIFPQISSFL MLIKDGDRHV RRAAVSALST FAHYKPNLIK GLLPELLPLL YDQTVIKKEL IRTVDLGPFK HVVDDGLELR KAAFECVFTL VDSCLDQVNP
1101: SSFIVPFLKS GLEDHYDLKM LCHLILSLLA DKCPSAVLAV LDSLVEPLHK TISFKPKQDA VKQEHDRNED MIRSALRAIS SLDRINGVDY SHKFKGLMGD
1201: MKRSVPLWEK FQTIRNE
Arabidopsis Description
CAND1Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L5Y6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.