Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09359 | Canola | cytosol | 98.7 | 99.75 |
| CDY03047 | Canola | cytosol | 95.45 | 95.68 |
| CDY45206 | Canola | cytosol | 94.15 | 95.39 |
| AT2G02560.1 | Thale cress | cytosol | 94.47 | 95.32 |
| VIT_12s0035g01840.t01 | Wine grape | cytosol | 81.79 | 82.59 |
| KRH51281 | Soybean | endoplasmic reticulum | 81.38 | 82.25 |
| KRH01878 | Soybean | endoplasmic reticulum | 81.38 | 82.18 |
| Solyc01g103010.2.1 | Tomato | cytosol | 79.02 | 79.87 |
| GSMUA_Achr10P... | Banana | cytosol | 77.64 | 77.58 |
| HORVU5Hr1G011280.4 | Barley | cytosol, endoplasmic reticulum, peroxisome | 39.67 | 76.73 |
| EES06334 | Sorghum | cytosol | 75.85 | 76.54 |
| Os02t0167700-01 | Rice | plasma membrane | 75.53 | 76.27 |
| TraesCS5D01G057500.1 | Wheat | cytosol | 75.2 | 75.88 |
| TraesCS5A01G046900.1 | Wheat | golgi | 75.12 | 75.8 |
| TraesCS5B01G051900.1 | Wheat | cytosol | 75.04 | 75.72 |
| TraesCS2D01G036800.1 | Wheat | cytosol | 74.55 | 75.23 |
| TraesCS2A01G037800.2 | Wheat | cytosol, unclear | 74.47 | 75.14 |
| TraesCS2B01G051000.1 | Wheat | cytosol, golgi | 74.39 | 75.06 |
| HORVU2Hr1G005650.6 | Barley | cytosol | 74.31 | 74.98 |
| KRH75237 | Soybean | cytosol, endoplasmic reticulum, golgi, plastid | 19.51 | 73.85 |
| HORVU0Hr1G010280.1 | Barley | plastid | 6.26 | 72.64 |
| TraesCS5D01G419100.1 | Wheat | nucleus | 57.72 | 66.92 |
| Os02t0169800-01 | Rice | cytosol, plasma membrane | 16.99 | 66.56 |
| HORVU5Hr1G059250.1 | Barley | cytosol | 3.74 | 65.71 |
| Zm00001d049167_P001 | Maize | plastid | 14.55 | 64.62 |
| HORVU1Hr1G041480.1 | Barley | cytosol | 4.63 | 64.04 |
| HORVU7Hr1G036210.1 | Barley | endoplasmic reticulum, plastid | 3.58 | 62.86 |
| TraesCS5A01G409300.1 | Wheat | cytosol | 48.13 | 47.4 |
| HORVU1Hr1G041490.1 | Barley | cytosol | 2.2 | 47.37 |
| Zm00001d050298_P001 | Maize | cytosol | 15.53 | 39.38 |
| Zm00001d027974_P002 | Maize | plastid | 16.34 | 36.09 |
| Zm00001d046662_P001 | Maize | cytosol | 5.04 | 15.78 |
Protein Annotations
| EnsemblPlants:CDY41685 | EnsemblPlantsGene:GSBRNA2T00073373001 | GO:GO:0003674 | GO:GO:0005488 | InterPro:ARM-type_fold | InterPro:TATA-bd_TIP120 |
| PANTHER:PTHR12696 | PANTHER:PTHR12696:SF0 | PFAM:PF08623 | ProteinID:CDY41685 | ProteinID:CDY41685.1 | SEG:seg |
| SUPFAM:SSF48371 | UniParc:UPI0004EDCE82 | UniProt:A0A078HT21 | MapMan:19.2.2.8.1.5 | : | : |
Description
BnaC02g34690DBnaC02g34690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HT21]
Coordinates
chrLK032503:-:158457..166076
Molecular Weight (calculated)
135904.0 Da
IEP (calculated)
5.981
GRAVY (calculated)
0.006
Length
1230 amino acids
Sequence
(BLAST)
(BLAST)
0001: MANLQVSGII EKMTGKDKDF RYMATSDLLN ELNKESFKLD TDLEMRLSSI ILKQLDDVAG DVSGLAVKCL APLVKKVGEE RIVEMTNKLC EKLLHGKDQH
0101: RDTASIALRT VVAQVAPSLA PSILVTLTPQ MIGGISGEGM SSGIKCECLE IMCDVVQKYG SLMADDHDKL LNALLLQLGC NQATVRKKTV TCIASLASSL
0201: SDDLLAKATV QVVKNLSNKN AKSEITRTNI QMIGALSRSV GYRFGTHLGN TVPVLIKYCT SASENDEELR EYSLQALESF LLRCPRDISP YCDEILNLTL
0301: EYISYDPNFT DNMEEDTDDE TLEDEEDDES ANEYTDDEDA SWKVRRAAAK CLAGLIVSRS EMISKVYQEA CPKLIDRFKE REENVKMDVF NTFIDLLRQT
0401: GNVTKGQTDT DESRQILHPF TPSVCMVAKW LLKQEVSKIV KSINRQLREK SVKTKVGAFS VLRELVVVLP DCLADHIGSL VPGIERALND KSSTSNLKIE
0501: ALVFTKLVLA SHAPPVFHPY IKALSSPVLA AVGERYYKVT AEALRVCGEL VRVVRPSTQG MGFDFKPFVH PIYNAIMSRL TNQDQDQEVK ECAITCMGLV
0601: ISTFGDQLGA ELPSCLPVLV DRMGNEITRL TAVKAFAVIA TSPLHIDLSC VLDHLIAELT GFLRKANRVL RQATLITMNT LVTAYGDKID SDAYEVIVVE
0701: LSSLICVSDL HMTALALELC CTLMTGKSCS ENISLAVRNK VLPQALTLVK SPLLQGQALL ALQGFFEALV YHANTSFYTL LDSLLSCAKP SPQSGGVPKQ
0801: ALYSIAQCVA VLCLAAGDKN CSSTVKMLIE ILKDDSGTNS AKQHLALLSL GEIGRRKDLS AHAGIETIVI ESFQSPFEEI KSAASYALGN IAVGNLSNYL
0901: PFILNQIDNQ QKKQYILLHS LKEVIVRQSV DKADFQNSSV EKILALLFNH CESEEEGVRN VVAECLGKMA LIEPEKLVPA LKVRTTSPAA FTRATVVTAV
1001: KYSVVERPEK LDEIIFPETS SFLMLIKDGD RHVRRAAVSA LSTFAHYKPN LIKGLLSELL PLLYDQTVIK KELIRTVDLG PFKHVVDDGL ELRKAAFECV
1101: FTLLDSCLDQ LNPSSFIIPF LKSGLEDHYD LKMICHLILS LLADKCPSAV LAVLDSLVEP LQKTINFKPK QDAVKQEHDR NEDMIRSALR AISSLDRISG
1201: VDYSHKFKSL MAEMKRSESL WGKYQTIRNE
0101: RDTASIALRT VVAQVAPSLA PSILVTLTPQ MIGGISGEGM SSGIKCECLE IMCDVVQKYG SLMADDHDKL LNALLLQLGC NQATVRKKTV TCIASLASSL
0201: SDDLLAKATV QVVKNLSNKN AKSEITRTNI QMIGALSRSV GYRFGTHLGN TVPVLIKYCT SASENDEELR EYSLQALESF LLRCPRDISP YCDEILNLTL
0301: EYISYDPNFT DNMEEDTDDE TLEDEEDDES ANEYTDDEDA SWKVRRAAAK CLAGLIVSRS EMISKVYQEA CPKLIDRFKE REENVKMDVF NTFIDLLRQT
0401: GNVTKGQTDT DESRQILHPF TPSVCMVAKW LLKQEVSKIV KSINRQLREK SVKTKVGAFS VLRELVVVLP DCLADHIGSL VPGIERALND KSSTSNLKIE
0501: ALVFTKLVLA SHAPPVFHPY IKALSSPVLA AVGERYYKVT AEALRVCGEL VRVVRPSTQG MGFDFKPFVH PIYNAIMSRL TNQDQDQEVK ECAITCMGLV
0601: ISTFGDQLGA ELPSCLPVLV DRMGNEITRL TAVKAFAVIA TSPLHIDLSC VLDHLIAELT GFLRKANRVL RQATLITMNT LVTAYGDKID SDAYEVIVVE
0701: LSSLICVSDL HMTALALELC CTLMTGKSCS ENISLAVRNK VLPQALTLVK SPLLQGQALL ALQGFFEALV YHANTSFYTL LDSLLSCAKP SPQSGGVPKQ
0801: ALYSIAQCVA VLCLAAGDKN CSSTVKMLIE ILKDDSGTNS AKQHLALLSL GEIGRRKDLS AHAGIETIVI ESFQSPFEEI KSAASYALGN IAVGNLSNYL
0901: PFILNQIDNQ QKKQYILLHS LKEVIVRQSV DKADFQNSSV EKILALLFNH CESEEEGVRN VVAECLGKMA LIEPEKLVPA LKVRTTSPAA FTRATVVTAV
1001: KYSVVERPEK LDEIIFPETS SFLMLIKDGD RHVRRAAVSA LSTFAHYKPN LIKGLLSELL PLLYDQTVIK KELIRTVDLG PFKHVVDDGL ELRKAAFECV
1101: FTLLDSCLDQ LNPSSFIIPF LKSGLEDHYD LKMICHLILS LLADKCPSAV LAVLDSLVEP LQKTINFKPK QDAVKQEHDR NEDMIRSALR AISSLDRISG
1201: VDYSHKFKSL MAEMKRSESL WGKYQTIRNE
0001: MANLQVSGIL EKMTGKDKDY RYMATSDLLN ELNKDSFKID LDLEVRLSSI ILQQLDDVAG DVSGLAVKCL APLVKKVGEE RIVEMTNKLC DKLLHGKDQH
0101: RDTASIALRT VVAQIAPTLA PSILVTLTPQ MIGGISGQGM SSGIKCECLE IMCDVVQKYG SLMTDDHEKL LNTLLLQLGC NQATVRKKTV TCIASLASSL
0201: SDDLLAKATV EVVKNLSNRN AKSEITRTNI QMIGALCRAV GYRFGTHLGN TVPVLINYCT SASENDEELR EYSLQALESF LLRCPRDISP YCDEILNLTL
0301: EYISYDPNFT DNMEEDTDNE TLEDEEDDES ANEYTDDEDA SWKVRRAAAK CLAGLIVSRS EMLTKVYQEA CPKLIDRFKE REENVKMDVF NTFIDLLRQT
0401: GNVTKGQTDT DESSPKWLLK QEVSKIVKSI NRQLREKSVK TKVGAFSVLR ELVVVLPDCL ADHIGSLVPG IERALNDKSS TSNLKIEALV FTKLVLASHA
0501: PPVFHPYIKA LSSPVLAAVG ERYYKVTAEA LRVCGELVRV VRPSTAGMGF DFKPFVHPIY NAIMSRLTNQ DQDQEVKECA ITCMGLVIST FGDQLRAELP
0601: SCLPVLVDRM GNEITRLTAV KAFSVIATSP LHINLSCVLD HLIAELTGFL RKANRVLRQA TLITMNTLVT AYGDKIGSEA YEVILVELSS LISVSDLHMT
0701: ALALELCCTL MTGKSCSENI SLAVRNKVLP QALTLVKSPL LQGQALLDLQ KFFEALVYHA NTSFYTLLES LLSCAKPSPQ SGGVPKQALY SIAQCVAVLC
0801: LAAGDKNCSS TVKMLMEILK DDSGTNSAKQ HLALLSLGEI GRRKDLSAHA GIETIVIESF QSPFEEIKSA ASYALGNIAV GNLSNYLPFI LDQIDNQQKK
0901: QYILLHSLKE VIVRQSVDKA DFQNSSVEKI LALLFNHCES EEEGVRNVVA ECLGKMALIE PEKLVPALQV RTTSPAAFTR ATVVTAVKYS VVERPEKLDE
1001: IIFPQISSFL MLIKDGDRHV RRAAVSALST FAHYKPNLIK GLLPELLPLL YDQTVIKKEL IRTVDLGPFK HVVDDGLELR KAAFECVFTL VDSCLDQVNP
1101: SSFIVPFLKS GLEDHYDLKM LCHLILSLLA DKCPSAVLAV LDSLVEPLHK TISFKPKQDA VKQEHDRNED MIRSALRAIS SLDRINGVDY SHKFKGLMGD
1201: MKRSVPLWEK FQTIRNE
0101: RDTASIALRT VVAQIAPTLA PSILVTLTPQ MIGGISGQGM SSGIKCECLE IMCDVVQKYG SLMTDDHEKL LNTLLLQLGC NQATVRKKTV TCIASLASSL
0201: SDDLLAKATV EVVKNLSNRN AKSEITRTNI QMIGALCRAV GYRFGTHLGN TVPVLINYCT SASENDEELR EYSLQALESF LLRCPRDISP YCDEILNLTL
0301: EYISYDPNFT DNMEEDTDNE TLEDEEDDES ANEYTDDEDA SWKVRRAAAK CLAGLIVSRS EMLTKVYQEA CPKLIDRFKE REENVKMDVF NTFIDLLRQT
0401: GNVTKGQTDT DESSPKWLLK QEVSKIVKSI NRQLREKSVK TKVGAFSVLR ELVVVLPDCL ADHIGSLVPG IERALNDKSS TSNLKIEALV FTKLVLASHA
0501: PPVFHPYIKA LSSPVLAAVG ERYYKVTAEA LRVCGELVRV VRPSTAGMGF DFKPFVHPIY NAIMSRLTNQ DQDQEVKECA ITCMGLVIST FGDQLRAELP
0601: SCLPVLVDRM GNEITRLTAV KAFSVIATSP LHINLSCVLD HLIAELTGFL RKANRVLRQA TLITMNTLVT AYGDKIGSEA YEVILVELSS LISVSDLHMT
0701: ALALELCCTL MTGKSCSENI SLAVRNKVLP QALTLVKSPL LQGQALLDLQ KFFEALVYHA NTSFYTLLES LLSCAKPSPQ SGGVPKQALY SIAQCVAVLC
0801: LAAGDKNCSS TVKMLMEILK DDSGTNSAKQ HLALLSLGEI GRRKDLSAHA GIETIVIESF QSPFEEIKSA ASYALGNIAV GNLSNYLPFI LDQIDNQQKK
0901: QYILLHSLKE VIVRQSVDKA DFQNSSVEKI LALLFNHCES EEEGVRNVVA ECLGKMALIE PEKLVPALQV RTTSPAAFTR ATVVTAVKYS VVERPEKLDE
1001: IIFPQISSFL MLIKDGDRHV RRAAVSALST FAHYKPNLIK GLLPELLPLL YDQTVIKKEL IRTVDLGPFK HVVDDGLELR KAAFECVFTL VDSCLDQVNP
1101: SSFIVPFLKS GLEDHYDLKM LCHLILSLLA DKCPSAVLAV LDSLVEPLHK TISFKPKQDA VKQEHDRNED MIRSALRAIS SLDRINGVDY SHKFKGLMGD
1201: MKRSVPLWEK FQTIRNE
Arabidopsis Description
CAND1Cullin-associated NEDD8-dissociated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L5Y6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.