Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d049167_P001 | Maize | plastid | 16.88 | 33.94 |
| Zm00001d050298_P001 | Maize | cytosol | 24.78 | 28.45 |
| Zm00001d053813_P002 | Maize | mitochondrion | 40.22 | 17.64 |
| VIT_12s0035g01840.t01 | Wine grape | cytosol | 36.8 | 16.83 |
| Bra024815.1-P | Field mustard | cytosol | 36.8 | 16.76 |
| AT2G02560.1 | Thale cress | cytosol | 36.62 | 16.73 |
| CDY45206 | Canola | cytosol | 36.27 | 16.64 |
| KRH51281 | Soybean | endoplasmic reticulum | 36.27 | 16.6 |
| KRH01878 | Soybean | endoplasmic reticulum | 36.27 | 16.58 |
| CDY03047 | Canola | cytosol | 36.45 | 16.54 |
| Bra026586.1-P | Field mustard | cytosol | 35.91 | 16.43 |
| CDY09359 | Canola | cytosol | 35.91 | 16.43 |
| CDY41685 | Canola | cytosol | 36.09 | 16.34 |
| Solyc01g103010.2.1 | Tomato | cytosol | 35.37 | 16.19 |
| KRH75237 | Soybean | cytosol, endoplasmic reticulum, golgi, plastid | 1.8 | 3.08 |
| Zm00001d046662_P001 | Maize | cytosol | 1.97 | 2.8 |
Protein Annotations
| EnsemblPlants:Zm00001d027974_P002 | EnsemblPlants:Zm00001d027974_T002 | EnsemblPlantsGene:Zm00001d027974 | Gene3D:1.25.10.10 | Gene3D:3.30.200.20 | GO:GO:0003674 |
| GO:GO:0005488 | InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:Aquarius_N | InterPro:IPR011989 | InterPro:Kinase-like_dom_sf |
| PANTHER:PTHR27001 | PANTHER:PTHR27001:SF103 | PFAM:PF16399 | ProteinID:ONL94416.1 | SUPFAM:SSF48371 | SUPFAM:SSF56112 |
| UniParc:UPI0008449A2D | UniProt:A0A1D6JR34 | MapMan:35.1 | : | : | : |
Description
Cullin-associated NEDD8-dissociated protein 1
Coordinates
chr1:-:18915217..18919323
Molecular Weight (calculated)
62179.4 Da
IEP (calculated)
7.081
GRAVY (calculated)
-0.270
Length
557 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSKTSGSIT TSLSTMGKLS SVGSNFMASA GSRSTSGGFD EGAKYFDGQI LKAPNLHTFT FIELKTATKN FRPDSVLGEG GFGRVYKGWV DEKTMAPTRN
101: GTDMVVAVKK LNSESMQGFE EWQMQYMIVD GVSSSWYIKF DTFTPAAERG LPVTRVISRM TLQQILARAV GYDAILNGSH VVNFTDDGSK VTAILEDDRI
201: FELPYWRTVE YLKVRKTLFG HSDATYSGYT CYTGIADFVP PDIDTVGESA NEYTDDEDAS WKVRRASSKC LSAIIVSRPE MLVKMFLEAC PKLIERFRER
301: EENVKMDIFN TFIELLRQTG NVTKGQGDID ESRKILHLDC MFCLSVSCPH ASFCFAFQPS LVAEARGPKV VKSINRQLRE KSIKTKVGTF SVLKELVVVL
401: PDCLADHFGS LVPGIEKALN DKSSTSNLKI EALVLTRLVM ASHSPSVFHP YIKWMNMPDL LEVIDFKDTF LDANHVQQSF PDYQVTFINS DGTKNLHPSP
501: PFKIRLSKKM RESSHALPGN MNSNLTVKSR NNMDDGEPQK EKLIVETYIP ADPGPYP
101: GTDMVVAVKK LNSESMQGFE EWQMQYMIVD GVSSSWYIKF DTFTPAAERG LPVTRVISRM TLQQILARAV GYDAILNGSH VVNFTDDGSK VTAILEDDRI
201: FELPYWRTVE YLKVRKTLFG HSDATYSGYT CYTGIADFVP PDIDTVGESA NEYTDDEDAS WKVRRASSKC LSAIIVSRPE MLVKMFLEAC PKLIERFRER
301: EENVKMDIFN TFIELLRQTG NVTKGQGDID ESRKILHLDC MFCLSVSCPH ASFCFAFQPS LVAEARGPKV VKSINRQLRE KSIKTKVGTF SVLKELVVVL
401: PDCLADHFGS LVPGIEKALN DKSSTSNLKI EALVLTRLVM ASHSPSVFHP YIKWMNMPDL LEVIDFKDTF LDANHVQQSF PDYQVTFINS DGTKNLHPSP
501: PFKIRLSKKM RESSHALPGN MNSNLTVKSR NNMDDGEPQK EKLIVETYIP ADPGPYP
001: MGSTPFCYSI NPSPSKLDFT RTHVFSPVSK QFYLDLSSFS GKPGGVSGFR SRRALLGVKA ATALVEKEEK REAVTEKKKK SRVLVAGGGI GGLVFALAAK
101: KKGFDVLVFE KDLSAIRGEG KYRGPIQIQS NALAALEAID IEVAEQVMEA GCITGDRING LVDGISGTWY VKFDTFTPAA SRGLPVTRVI SRMTLQQILA
201: RAVGEDVIRN ESNVVDFEDS GDKVTVVLEN GQRYEGDLLV GADGIWSKVR NNLFGRSEAT YSGYTCYTGI ADFIPADIES VGYRVFLGHK QYFVSSDVGG
301: GKMQWYAFHE EPAGGADAPN GMKKRLFEIF DGWCDNVLDL LHATEEEAIL RRDIYDRSPG FTWGKGRVTL LGDSIHAMQP NMGQGGCMAI EDSFQLALEL
401: DEAWKQSVET TTPVDVVSSL KRYEESRRLR VAIIHAMARM AAIMASTYKA YLGVGLGPLS FLTKFRVPHP GRVGGRFFVD IAMPSMLDWV LGGNSEKLQG
501: RPPSCRLTDK ADDRLREWFE DDDALERTIK GEWYLIPHGD DCCVSETLCL TKDEDQPCIV GSEPDQDFPG MRIVIPSSQV SKMHARVIYK DGAFFLMDLR
601: SEHGTYVTDN EGRRYRATPN FPARFRSSDI IEFGSDKKAA FRVKVIRKTP KSTRKNESNN DKLLQTA
101: KKGFDVLVFE KDLSAIRGEG KYRGPIQIQS NALAALEAID IEVAEQVMEA GCITGDRING LVDGISGTWY VKFDTFTPAA SRGLPVTRVI SRMTLQQILA
201: RAVGEDVIRN ESNVVDFEDS GDKVTVVLEN GQRYEGDLLV GADGIWSKVR NNLFGRSEAT YSGYTCYTGI ADFIPADIES VGYRVFLGHK QYFVSSDVGG
301: GKMQWYAFHE EPAGGADAPN GMKKRLFEIF DGWCDNVLDL LHATEEEAIL RRDIYDRSPG FTWGKGRVTL LGDSIHAMQP NMGQGGCMAI EDSFQLALEL
401: DEAWKQSVET TTPVDVVSSL KRYEESRRLR VAIIHAMARM AAIMASTYKA YLGVGLGPLS FLTKFRVPHP GRVGGRFFVD IAMPSMLDWV LGGNSEKLQG
501: RPPSCRLTDK ADDRLREWFE DDDALERTIK GEWYLIPHGD DCCVSETLCL TKDEDQPCIV GSEPDQDFPG MRIVIPSSQV SKMHARVIYK DGAFFLMDLR
601: SEHGTYVTDN EGRRYRATPN FPARFRSSDI IEFGSDKKAA FRVKVIRKTP KSTRKNESNN DKLLQTA
Arabidopsis Description
ZEPZeaxanthin epoxidase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FGC7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.