Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG96405 | Soybean | cytosol | 96.49 | 96.88 |
| CDY22060 | Canola | cytosol | 80.03 | 80.35 |
| AT4G02570.1 | Thale cress | cytosol | 79.89 | 80.22 |
| CDY21896 | Canola | cytosol | 79.76 | 80.08 |
| Bra000874.1-P | Field mustard | cytosol | 79.62 | 79.95 |
| CDX90932 | Canola | cytosol | 79.62 | 79.95 |
| CDY18013 | Canola | cytosol | 79.62 | 79.95 |
| KRH50876 | Soybean | endoplasmic reticulum | 79.62 | 79.3 |
| KRH02236 | Soybean | cytosol, nucleus | 79.35 | 79.03 |
| KRH12127 | Soybean | cytosol | 79.35 | 79.03 |
| KRH37131 | Soybean | cytosol, nucleus | 79.08 | 78.76 |
| KRH15695 | Soybean | cytosol | 35.76 | 72.6 |
| Solyc01g067170.1.1 | Tomato | mitochondrion, plastid | 11.34 | 62.69 |
| GSMUA_Achr9P17620_001 | Banana | cytosol | 60.32 | 60.65 |
| Bra036257.1-P | Field mustard | cytosol, nucleus, peroxisome | 79.76 | 59.94 |
| AT1G59790.1 | Thale cress | cytosol | 28.74 | 56.95 |
| Solyc01g067200.1.1 | Tomato | cytosol | 14.17 | 54.69 |
| KRH21073 | Soybean | cytosol | 15.38 | 39.86 |
| PGSC0003DMT400063662 | Potato | cytosol | 14.04 | 35.86 |
| KRH45896 | Soybean | cytosol | 34.95 | 35.38 |
| KRG99095 | Soybean | cytosol | 34.82 | 35.25 |
| KRG93520 | Soybean | cytosol | 34.14 | 34.52 |
| KRH18483 | Soybean | cytosol | 34.01 | 34.38 |
| KRH70713 | Soybean | cytosol | 32.12 | 32.74 |
| Os05t0193900-00 | Rice | cytosol | 17.41 | 32.01 |
| EES04173 | Sorghum | cytosol | 11.88 | 30.77 |
| KRH42547 | Soybean | cytosol | 30.9 | 29.78 |
| KRH58640 | Soybean | cytosol | 30.9 | 29.55 |
| Zm00001d042193_P001 | Maize | cytosol | 11.61 | 29.45 |
| KRH11182 | Soybean | cytosol, plastid | 30.9 | 29.06 |
| TraesCS3B01G497300.1 | Wheat | cytosol | 11.74 | 29.0 |
| HORVU3Hr1G098530.4 | Barley | cytosol | 11.61 | 28.57 |
| TraesCS3A01G457400.1 | Wheat | cytosol | 11.34 | 28.0 |
| TraesCS3D01G450200.1 | Wheat | cytosol | 11.34 | 28.0 |
| Os01t0935300-02 | Rice | cytosol | 11.2 | 27.67 |
| KRH21072 | Soybean | plastid | 13.9 | 21.33 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:1.10.10.2620 | Gene3D:1.20.1310.10 | EntrezGene:100778287 | MapMan:19.2.2.8.1.2 | EMBL:ACUP02002102 |
| InterPro:Cullin_CS | InterPro:Cullin_N | InterPro:Cullin_homology | InterPro:Cullin_homology_sf | InterPro:Cullin_neddylation_domain | InterPro:Cullin_repeat-like_dom_sf |
| EnsemblPlantsGene:GLYMA_03G211400 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0031461 |
| GO:GO:0031625 | GO:GO:0042787 | GO:GO:0061630 | InterPro:IPR016158 | InterPro:IPR036388 | UniProt:K7KG94 |
| EnsemblPlants:KRH68142 | ProteinID:KRH68142 | ProteinID:KRH68142.1 | PFAM:PF00888 | PFAM:PF10557 | ScanProsite:PS01256 |
| PFscan:PS50069 | PANTHER:PTHR11932 | PANTHER:PTHR11932:SF97 | SMART:SM00182 | SMART:SM00884 | SUPFAM:SSF46785 |
| SUPFAM:SSF74788 | SUPFAM:SSF75632 | UniParc:UPI0002958D73 | InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg |
Description
hypothetical protein
Coordinates
chr3:-:41756980..41761732
Molecular Weight (calculated)
86609.5 Da
IEP (calculated)
7.273
GRAVY (calculated)
-0.436
Length
741 amino acids
Sequence
(BLAST)
(BLAST)
001: MCAMERKIID FDQGWDYMQK GITKLKKILE GAPETPFSSE EYMMLYTTIY NMCTQKPPND FSQQLYDKYK DAFDEYIKIT VLPSLREKHD EFMLRELVQR
101: WLNHKVMVRW LSRFFHYLDR YFISRRSLPG LGAVGLTCFR ESVYMEVRVN ARKAVIALID KEREGEQIDR SLLKNVLDIF VEIGMGEMGQ YEQDFEVHML
201: EDTADYYKSK AANWIEIDSC PDYMLKAEDC LRRERDRVSH YLHCSTEQKL VEKVQLELLV THANQLLEKE NSGCHALLRD DKVEDLSRMY RLYHKIPKGL
301: DPVANVFKQH ITVEGTSLVQ QAEEATSNQT TNGSGFQEQV LVRKFLELHD KYMVYVNDCF MNHTLFHKAL KEAFEIFCNK TVAGSSSAEL LSTFCDNILK
401: KGGSEKLSDE AIEDTLEKVV KLLAYISDKD LFAEFYRKKL ARRLLFDRSA NDDHEKCILT KLKQQCGGQF TSKMEGMVVD LTLARDNQLK FEEYLRDNSH
501: VNPGIDLTVT VLTTGFWPSY KSFDLNLPSE MIRCLEVFKG FYETRTKHRK LTWIYSLGTC HVTGKFETKN IELIVPTYPA AALLLFNNAD RLSYSEIMTQ
601: LNLGHEDVAR LLHSLSSAKY KILIKEPNNK VISQSDIFEF NYKFTDKMRR IKIPLPPADE RKKVIEDVDK DRRYAIDAAI VRIMKSRKIL GHQQLVLECV
701: EQLGRMFKPD IKAIKKRIED LITRDYLERD KDNPNTFRYL A
101: WLNHKVMVRW LSRFFHYLDR YFISRRSLPG LGAVGLTCFR ESVYMEVRVN ARKAVIALID KEREGEQIDR SLLKNVLDIF VEIGMGEMGQ YEQDFEVHML
201: EDTADYYKSK AANWIEIDSC PDYMLKAEDC LRRERDRVSH YLHCSTEQKL VEKVQLELLV THANQLLEKE NSGCHALLRD DKVEDLSRMY RLYHKIPKGL
301: DPVANVFKQH ITVEGTSLVQ QAEEATSNQT TNGSGFQEQV LVRKFLELHD KYMVYVNDCF MNHTLFHKAL KEAFEIFCNK TVAGSSSAEL LSTFCDNILK
401: KGGSEKLSDE AIEDTLEKVV KLLAYISDKD LFAEFYRKKL ARRLLFDRSA NDDHEKCILT KLKQQCGGQF TSKMEGMVVD LTLARDNQLK FEEYLRDNSH
501: VNPGIDLTVT VLTTGFWPSY KSFDLNLPSE MIRCLEVFKG FYETRTKHRK LTWIYSLGTC HVTGKFETKN IELIVPTYPA AALLLFNNAD RLSYSEIMTQ
601: LNLGHEDVAR LLHSLSSAKY KILIKEPNNK VISQSDIFEF NYKFTDKMRR IKIPLPPADE RKKVIEDVDK DRRYAIDAAI VRIMKSRKIL GHQQLVLECV
701: EQLGRMFKPD IKAIKKRIED LITRDYLERD KDNPNTFRYL A
001: MAKKDSVLEA GWSVMEAGVA KLQKILEEVP DEPPFDPVQR MQLYTTVHNL CTQKPPNDYS QQIYDRYGGV YVDYNKQTVL PAIREKHGEY MLRELVKRWA
101: NQKILVRWLS HFFEYLDRFY TRRGSHPTLS AVGFISFRDL VYQELQSKAK DAVLALIHKE REGEQIDRAL LKNVIDVYCG NGMGELVKYE EDFESFLLED
201: SASYYSRNAS RWNQENSCPD YMIKAEESLR LEKERVTNYL HSTTEPKLVA KVQNELLVVV AKQLIENEHS GCRALLRDDK MDDLARMYRL YHPIPQGLDP
301: VADLFKQHIT VEGSALIKQA TEAATDKAAS TSGLKVQDQV LIRQLIDLHD KFMVYVDECF QKHSLFHKAL KEAFEVFCNK TVAGVSSAEI LATYCDNILK
401: TGGGIEKLEN EDLELTLEKV VKLLVYISDK DLFAEFFRKK QARRLLFDRN GNDYHERSLL TKFKELLGAQ FTSKMEGMLT DMTLAKEHQT NFVEFLSVNK
501: TKKLGMDFTV TVLTTGFWPS YKTTDLNLPI EMVNCVEAFK AYYGTKTNSR RLSWIYSLGT CQLAGKFDKK TIEIVVTTYQ AAVLLLFNNT ERLSYTEILE
601: QLNLGHEDLA RLLHSLSCLK YKILIKEPMS RNISNTDTFE FNSKFTDKMR RIRVPLPPMD ERKKIVEDVD KDRRYAIDAA LVRIMKSRKV LGHQQLVSEC
701: VEHLSKMFKP DIKMIKKRIE DLISRDYLER DTDNPNTFKY LA
101: NQKILVRWLS HFFEYLDRFY TRRGSHPTLS AVGFISFRDL VYQELQSKAK DAVLALIHKE REGEQIDRAL LKNVIDVYCG NGMGELVKYE EDFESFLLED
201: SASYYSRNAS RWNQENSCPD YMIKAEESLR LEKERVTNYL HSTTEPKLVA KVQNELLVVV AKQLIENEHS GCRALLRDDK MDDLARMYRL YHPIPQGLDP
301: VADLFKQHIT VEGSALIKQA TEAATDKAAS TSGLKVQDQV LIRQLIDLHD KFMVYVDECF QKHSLFHKAL KEAFEVFCNK TVAGVSSAEI LATYCDNILK
401: TGGGIEKLEN EDLELTLEKV VKLLVYISDK DLFAEFFRKK QARRLLFDRN GNDYHERSLL TKFKELLGAQ FTSKMEGMLT DMTLAKEHQT NFVEFLSVNK
501: TKKLGMDFTV TVLTTGFWPS YKTTDLNLPI EMVNCVEAFK AYYGTKTNSR RLSWIYSLGT CQLAGKFDKK TIEIVVTTYQ AAVLLLFNNT ERLSYTEILE
601: QLNLGHEDLA RLLHSLSCLK YKILIKEPMS RNISNTDTFE FNSKFTDKMR RIRVPLPPMD ERKKIVEDVD KDRRYAIDAA LVRIMKSRKV LGHQQLVSEC
701: VEHLSKMFKP DIKMIKKRIE DLISRDYLER DTDNPNTFKY LA
Arabidopsis Description
CUL2Cullin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRZ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.