Factsheet for AT1G59790.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G59800.1	Thale cress	cytosol	42.51	62.35
AT1G43140.1	Thale cress	cytosol	63.1	32.73
AT4G02570.1	Thale cress	cytosol	63.1	31.98
Solyc01g099290.2.1	Tomato	cytosol	22.46	31.58
PGSC0003DMT400063662	Potato	cytosol	23.8	30.69
AT1G02980.1	Thale cress	cytosol	59.89	30.19
KRG96405	Soybean	cytosol	56.95	28.86
KRH68142	Soybean	cytosol	56.95	28.74
EES04173	Sorghum	cytosol	21.12	27.62
HORVU3Hr1G098530.4	Barley	cytosol	21.66	26.91
Zm00001d042193_P001	Maize	cytosol	20.59	26.37
Os01t0935300-02	Rice	cytosol	21.12	26.33
TraesCS3B01G497300.1	Wheat	cytosol	20.59	25.67
TraesCS3A01G457400.1	Wheat	cytosol	20.32	25.33
TraesCS3D01G450200.1	Wheat	cytosol	20.32	25.33
GSMUA_Achr9P17620_001	Banana	cytosol	46.26	23.47
Os05t0193900-00	Rice	cytosol	22.19	20.6
AT1G69670.1	Thale cress	cytosol	22.99	11.75
AT1G26830.1	Thale cress	cytosol	22.73	11.61
AT5G46210.1	Thale cress	cytosol	18.18	8.59

Protein Annotations

Gene3D:1.20.1310.10	MapMan:35.1	EntrezGene:842272	ProteinID:AAD39322.1	ProteinID:AEE33618.1	ArrayExpress:AT1G59790
EnsemblPlantsGene:AT1G59790	RefSeq:AT1G59790	TAIR:AT1G59790	RefSeq:AT1G59790-TAIR-G	EnsemblPlants:AT1G59790.1	TAIR:AT1G59790.1
Unigene:At.52273	InterPro:Cullin_N	InterPro:Cullin_repeat-like_dom_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0006511
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	GO:GO:0031461	GO:GO:0031625	GO:GO:0042787	GO:GO:0061630	RefSeq:NP_176188.1
PFAM:PF00888	PO:PO:0000037	PO:PO:0001016	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0009005	PO:PO:0009025	PO:PO:0009031	PO:PO:0009046	PO:PO:0009047	PO:PO:0025022
PO:PO:0025281	PANTHER:PTHR11932	PANTHER:PTHR11932:SF97	UniProt:Q9XIE9	SUPFAM:SSF74788	UniParc:UPI000016318F

Description

Putative cullin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIE9]

Coordinates

chr1:+:22001504..22003385

Molecular Weight (calculated)

44919.4 Da

IEP (calculated)

7.079

GRAVY (calculated)

-0.464

Length

374 amino acids

Sequence
(BLAST)

001: MDSRRMSRPR QIKFEEGWSN IQKGITKLIR ILEGEPEPTF YFSECFKLYT IIYDMCVQRS DYSQQLYEKY RKVIEDYTIQ TVLPSLREKH DEDMLRELVK
101: RWNNHKIMVK WLSKFFVYID RHLVRRSKIP IPSLDEVGLT CFLDLVYCEM QSTAKEVVIA LIHKEREGEQ IDRALVKNVL DIYVENGMGT LEKYEEDFES
201: FMLQDTASYY SRKASRWTEE DSCPDYMIKV EECLKMERER VTHYLHSITE PKLVEKIQNE LLVMVTKNRL ENEHSGFSAL LRDDKKNDLS RIYRLYLPIP
301: KRLGRVADLF KKHITEEGNA LIKQADDKTT NQLLIELHNK FIVYVIECFQ NHTLFHKVRV LFMCVYLFQQ YYIE

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.