Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G26830.1 | Thale cress | cytosol | 88.11 | 88.11 |
| Solyc01g010820.2.1 | Tomato | cytosol | 83.61 | 83.38 |
| PGSC0003DMT400016765 | Potato | cytosol | 83.47 | 83.24 |
| VIT_01s0026g02230.t01 | Wine grape | cytosol | 83.33 | 83.22 |
| KRH45896 | Soybean | cytosol | 81.56 | 81.56 |
| KRG99095 | Soybean | cytosol | 81.01 | 81.01 |
| GSMUA_Achr7P18000_001 | Banana | cytosol | 77.46 | 80.08 |
| GSMUA_Achr8P16990_001 | Banana | cytosol | 77.05 | 79.66 |
| GSMUA_AchrUn_... | Banana | cytosol | 77.05 | 79.66 |
| EES05529 | Sorghum | cytosol | 79.37 | 78.94 |
| TraesCS6D01G285800.1 | Wheat | cytosol | 78.83 | 78.4 |
| Zm00001d018043_P001 | Maize | cytosol | 78.69 | 78.26 |
| TraesCS6B01G335200.1 | Wheat | cytosol | 78.69 | 78.26 |
| TraesCS6A01G306600.1 | Wheat | cytosol | 78.69 | 78.26 |
| Os02t0746000-01 | Rice | cytosol | 78.01 | 77.58 |
| HORVU6Hr1G075720.2 | Barley | cytosol | 78.01 | 76.54 |
| GSMUA_AchrUn_... | Banana | cytosol | 61.2 | 75.29 |
| KRH70713 | Soybean | cytosol | 71.45 | 71.94 |
| AT5G46210.1 | Thale cress | cytosol | 40.57 | 37.5 |
| AT4G02570.1 | Thale cress | cytosol | 32.79 | 32.52 |
| AT1G02980.1 | Thale cress | cytosol | 32.24 | 31.81 |
| AT1G43140.1 | Thale cress | cytosol | 30.6 | 31.07 |
| AT1G59800.1 | Thale cress | cytosol | 8.61 | 24.71 |
| AT1G59790.1 | Thale cress | cytosol | 11.75 | 22.99 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:1.10.10.2620 | Gene3D:1.20.1310.10 | MapMan:19.2.2.8.2.1 | EntrezGene:843303 | ProteinID:AAG52544.1 |
| ProteinID:AEE34961.1 | EMBL:AJ344541 | ProteinID:ANM60547.1 | ArrayExpress:AT1G69670 | EnsemblPlantsGene:AT1G69670 | RefSeq:AT1G69670 |
| TAIR:AT1G69670 | RefSeq:AT1G69670-TAIR-G | EnsemblPlants:AT1G69670.1 | TAIR:AT1G69670.1 | Unigene:At.35390 | Symbol:CUL3B |
| InterPro:Cullin_N | InterPro:Cullin_homology | InterPro:Cullin_homology_sf | InterPro:Cullin_neddylation_domain | InterPro:Cullin_repeat-like_dom_sf | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0006464 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0031461 | GO:GO:0031625 | GO:GO:0042787 |
| GO:GO:0061630 | InterPro:IPR016158 | InterPro:IPR036388 | RefSeq:NP_001319357.1 | RefSeq:NP_177125.3 | PFAM:PF00888 |
| PFAM:PF10557 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000201 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007095 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PFscan:PS50069 | PANTHER:PTHR11932 | PANTHER:PTHR11932:SF95 | UniProt:Q9C9L0 | SMART:SM00182 |
| SMART:SM00884 | SUPFAM:SSF46785 | SUPFAM:SSF74788 | SUPFAM:SSF75632 | UniParc:UPI00000A41EB | InterPro:WH-like_DNA-bd_sf |
| InterPro:WH_DNA-bd_sf | : | : | : | : | : |
Description
CUL3BCullin-3B [Source:UniProtKB/Swiss-Prot;Acc:Q9C9L0]
Coordinates
chr1:-:26201986..26204795
Molecular Weight (calculated)
85615.3 Da
IEP (calculated)
7.815
GRAVY (calculated)
-0.507
Length
732 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNQKKRNFQ IEAFKQRVVV DPKYADKTWK ILEHAIHEIY NHNASGLSFE ELYRNAYNMV LHKYGDKLYT GLVTTMTFHL KEICKSIEEA QGGAFLELLN
101: RKWNDHNKAL QMIRDILMYM DRTYVSTTKK THVHELGLHL WRDNVVYSSK IQTRLLNTLL DLVHKERTGE VIDRVLMRNV IKMFMDLGES VYQDDFEKPF
201: LEASAEFYKV ESMEFIESCD CGEYLKKAEK PLVEEVERVV NYLDAKSEAK ITSVVEREMI ANHVQRLVHM ENSGLVNMLL NDKYEDMGRM YSLFRRVANG
301: LVTVRDVMTL HLREMGKQLV TDPEKSKDPV EFVQRLLDER DKYDRIINMA FNNDKTFQNA LNSSFEYFVN LNTRSPEFIS LFVDDKLRKG LKGVGEEDVD
401: LILDKVMMLF RYLQEKDVFE KYYKQHLAKR LLSGKTVSDD AERNLIVKLK TECGYQFTSK LEGMFTDMKT SHDTLLGFYN SHPELSEGPT LVVQVLTTGS
501: WPTQPTIQCN LPAEVSVLCE KFRSYYLGTH TGRRLSWQTN MGTADIKAVF GKGQKHELNV STFQMCVLML FNNSDRLSYK EIEQATEIPT PDLKRCLQSM
601: ACVKGKNVLR KEPMSKEIAE EDWFVVNDRF ASKFYKVKIG TVVAQKETEP EKQETRQRVE EDRKPQIEAA IVRIMKSRRV LDHNNIIAEV TKQLQTRFLA
701: NPTEIKKRIE SLIERDFLER DNTDRKLYRY LA
101: RKWNDHNKAL QMIRDILMYM DRTYVSTTKK THVHELGLHL WRDNVVYSSK IQTRLLNTLL DLVHKERTGE VIDRVLMRNV IKMFMDLGES VYQDDFEKPF
201: LEASAEFYKV ESMEFIESCD CGEYLKKAEK PLVEEVERVV NYLDAKSEAK ITSVVEREMI ANHVQRLVHM ENSGLVNMLL NDKYEDMGRM YSLFRRVANG
301: LVTVRDVMTL HLREMGKQLV TDPEKSKDPV EFVQRLLDER DKYDRIINMA FNNDKTFQNA LNSSFEYFVN LNTRSPEFIS LFVDDKLRKG LKGVGEEDVD
401: LILDKVMMLF RYLQEKDVFE KYYKQHLAKR LLSGKTVSDD AERNLIVKLK TECGYQFTSK LEGMFTDMKT SHDTLLGFYN SHPELSEGPT LVVQVLTTGS
501: WPTQPTIQCN LPAEVSVLCE KFRSYYLGTH TGRRLSWQTN MGTADIKAVF GKGQKHELNV STFQMCVLML FNNSDRLSYK EIEQATEIPT PDLKRCLQSM
601: ACVKGKNVLR KEPMSKEIAE EDWFVVNDRF ASKFYKVKIG TVVAQKETEP EKQETRQRVE EDRKPQIEAA IVRIMKSRRV LDHNNIIAEV TKQLQTRFLA
701: NPTEIKKRIE SLIERDFLER DNTDRKLYRY LA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.