Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G59790.1 | Thale cress | cytosol | 62.35 | 42.51 |
| VIT_05s0020g01340.t01 | Wine grape | mitochondrion | 21.96 | 34.78 |
| AT4G02570.1 | Thale cress | cytosol | 57.25 | 19.78 |
| AT1G43140.1 | Thale cress | cytosol | 54.9 | 19.42 |
| AT1G02980.1 | Thale cress | cytosol | 52.16 | 17.92 |
| Solyc06g008710.1.1 | Tomato | cytosol | 37.65 | 12.92 |
| AT1G26830.1 | Thale cress | cytosol | 25.1 | 8.74 |
| AT1G69670.1 | Thale cress | cytosol | 24.71 | 8.61 |
| AT5G46210.1 | Thale cress | cytosol | 20.0 | 6.44 |
| GSMUA_Achr2P07360_001 | Banana | mitochondrion | 0.39 | 0.26 |
| PGSC0003DMT400013645 | Potato | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.1310.10 | MapMan:35.1 | EntrezGene:842273 | ProteinID:AAD39323.1 | ProteinID:AEE33619.1 | ArrayExpress:AT1G59800 |
| EnsemblPlantsGene:AT1G59800 | RefSeq:AT1G59800 | TAIR:AT1G59800 | RefSeq:AT1G59800-TAIR-G | EnsemblPlants:AT1G59800.1 | TAIR:AT1G59800.1 |
| Unigene:At.52274 | InterPro:Cullin_N | InterPro:Cullin_repeat-like_dom_sf | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006464 | GO:GO:0006511 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 |
| GO:GO:0019538 | GO:GO:0031461 | GO:GO:0031625 | GO:GO:0042787 | GO:GO:0061630 | RefSeq:NP_176189.1 |
| PFAM:PF00888 | PANTHER:PTHR11932 | PANTHER:PTHR11932:SF97 | UniProt:Q9XIE8 | SUPFAM:SSF74788 | UniParc:UPI0000163190 |
Description
Cullin-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIE8]
Coordinates
chr1:+:22004964..22006172
Molecular Weight (calculated)
30466.8 Da
IEP (calculated)
6.520
GRAVY (calculated)
-0.520
Length
255 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAPTEIKFE VEWSNIQQGF TKLIRMIEGE SEPAFNQEIM MMMHTATYRI CAYKNPQQLY DKYRELIENY AIQTVLPSLR EKHDECMLRE LAKRWNAHKL
101: LVRLFSRRLV YLDDSFLSKK GLPSLREVGL NCFRDQVYRE MQSMAAEAIL ALIHKEREGE QIDRELVRNV IDVFVENGMG TLKKYEEDFE RLMLQDTASY
201: YSSKASRWIQ EESCLDYTLK PQQCLQRERE RVTHYLHPTT EPKLFEVRYG IIIWN
101: LVRLFSRRLV YLDDSFLSKK GLPSLREVGL NCFRDQVYRE MQSMAAEAIL ALIHKEREGE QIDRELVRNV IDVFVENGMG TLKKYEEDFE RLMLQDTASY
201: YSSKASRWIQ EESCLDYTLK PQQCLQRERE RVTHYLHPTT EPKLFEVRYG IIIWN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.