Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72590 | Canola | cytosol | 61.54 | 51.06 |
| PGSC0003DMT400097727 | Potato | cytosol | 73.08 | 33.14 |
| CDY51862 | Canola | cytosol | 71.79 | 19.38 |
| CDX93643 | Canola | cytosol | 69.23 | 10.69 |
| Solyc06g008710.1.1 | Tomato | cytosol | 100.0 | 10.5 |
| PGSC0003DMT400061802 | Potato | cytosol | 80.77 | 8.57 |
| PGSC0003DMT400029607 | Potato | cytosol | 80.77 | 8.53 |
| AT1G43140.1 | Thale cress | cytosol | 78.21 | 8.46 |
| Bra032576.1-P | Field mustard | cytosol | 79.49 | 8.4 |
| Bra034597.1-P | Field mustard | cytosol | 78.21 | 8.34 |
| CDY51951 | Canola | cytosol | 78.21 | 8.28 |
| CDY32488 | Canola | cytosol | 78.21 | 8.27 |
| PGSC0003DMT400023111 | Potato | cytosol | 76.92 | 8.13 |
| AT1G02980.1 | Thale cress | cytosol | 76.92 | 8.09 |
| PGSC0003DMT400022865 | Potato | cytosol | 75.64 | 8.03 |
| Bra018706.1-P | Field mustard | cytosol | 69.23 | 8.0 |
| Bra033362.1-P | Field mustard | cytosol | 73.08 | 7.96 |
| CDX89926 | Canola | cytosol | 73.08 | 7.93 |
| CDX67439 | Canola | cytosol | 69.23 | 7.68 |
| CDY11663 | Canola | cytosol | 69.23 | 7.68 |
| Bra028442.1-P | Field mustard | cytosol | 67.95 | 7.54 |
| CDX89925 | Canola | cytosol | 69.23 | 7.41 |
| GSMUA_Achr1P26690_001 | Banana | cytosol | 70.51 | 7.38 |
| Bra033363.1-P | Field mustard | cytosol | 69.23 | 6.94 |
| Bra032570.1-P | Field mustard | cytosol | 61.54 | 6.9 |
| PGSC0003DMT400023105 | Potato | cytosol | 43.59 | 6.0 |
| PGSC0003DMT400016765 | Potato | cytosol | 46.15 | 4.9 |
| PGSC0003DMT400003338 | Potato | cytosol | 44.87 | 4.77 |
| CDY18137 | Canola | cytosol | 70.51 | 3.75 |
| CDY51863 | Canola | cytosol | 8.97 | 1.62 |
| PGSC0003DMT400074970 | Potato | cytosol | 2.56 | 0.67 |
| PGSC0003DMT400038140 | Potato | cytosol | 0.0 | 0.0 |
| CDY37452 | Canola | cytosol | 0.0 | 0.0 |
| PGSC0003DMT400063662 | Potato | cytosol | 0.0 | 0.0 |
| PGSC0003DMT400085888 | Potato | cytosol | 0.0 | 0.0 |
| AT1G59800.1 | Thale cress | cytosol | 0.0 | 0.0 |
| VIT_05s0020g01340.t01 | Wine grape | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:35.1 | InterPro:Cullin_CS | InterPro:Cullin_neddylation_domain | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006511 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0031461 | GO:GO:0031625 |
| InterPro:IPR036388 | UniProt:M1A346 | PFAM:PF10557 | EnsemblPlantsGene:PGSC0003DMG400005332 | PGSC:PGSC0003DMG400005332 | EnsemblPlants:PGSC0003DMT400013645 |
| ScanProsite:PS01256 | PANTHER:PTHR11932 | PANTHER:PTHR11932:SF97 | SMART:SM00884 | SUPFAM:SSF46785 | UniParc:UPI0002962156 |
| InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | : | : | : | : |
Description
Cullin 1B [Source:PGSC_GENE;Acc:PGSC0003DMG400005332]
Coordinates
chr6:-:1234110..1235099
Molecular Weight (calculated)
9274.5 Da
IEP (calculated)
9.135
GRAVY (calculated)
-0.428
Length
78 amino acids
Sequence
(BLAST)
(BLAST)
1: MVEEVGKDRR YAIDACLVRI MKAKKVLTHQ QLILECVEQL SKMFKPDVKA IKKRIEDLIT RDYLERDLEN TNTYKYIA
001: MATILFKVIM MKELILLEEG WSVMKTGVAK LQRILEDLSE PPFDPGQYIN LYTIIYDMCL QQPPNDYSQE LYNKYRGVVD HYNKETVLPS MRERHGEYML
101: RELVKRWANH KILVRWLSRF CFYLDRFYVA RRGLPTLNDV GFTSFHDLVY QEIQSEAKDV LLALIHKERE GEQIDRTLVK NVIDVYCGNG VGQMVIYEED
201: FESFLLQDTA SYYSRKASRW SQEDSCPDYM LKAEECLKLE KERVTNYLHS TTEPKLVEKV QNELLVVVAK QLIENEHSGC LALLRDDKMG DLSRMYRLYR
301: LIPQGLEPIA DLFKQHVTAE GNALIKQAAD AATNQDASAS QVLVRKEIEL HDKYMVYVDE CFQKHSLFHK LLKEAFEVFC NKTVAGASSA EILATYCDNI
401: LKTRGGSEKL SDEATEITLE KVVNLLVYIS DKDLFAEFYR KKQARRLLFD RSGIMKEVTD ITLARELQTN FVDYLSANMT TKLGIDFTVT VLTTGFWPSY
501: KTTDLNLPTE MVNCVEAFKV FYGTKTNSRR LSWIYSLGTC HILGKFEKKT MELVVSTYQA AVLLLFNNAE RLSYTEISEQ LNLSHEDLVR LLHSLSCLKY
601: KILIKEPMSR TISKTDTFEF NSKFTDKMRK IRVPLPPMDE RKKVVEDVDK DRRYAIDAAL VRIMKSRKVL AHQQLVSECV EHLSKMFKPD IKMIKKRIED
701: LINRDYLERD TENANTFKYV A
101: RELVKRWANH KILVRWLSRF CFYLDRFYVA RRGLPTLNDV GFTSFHDLVY QEIQSEAKDV LLALIHKERE GEQIDRTLVK NVIDVYCGNG VGQMVIYEED
201: FESFLLQDTA SYYSRKASRW SQEDSCPDYM LKAEECLKLE KERVTNYLHS TTEPKLVEKV QNELLVVVAK QLIENEHSGC LALLRDDKMG DLSRMYRLYR
301: LIPQGLEPIA DLFKQHVTAE GNALIKQAAD AATNQDASAS QVLVRKEIEL HDKYMVYVDE CFQKHSLFHK LLKEAFEVFC NKTVAGASSA EILATYCDNI
401: LKTRGGSEKL SDEATEITLE KVVNLLVYIS DKDLFAEFYR KKQARRLLFD RSGIMKEVTD ITLARELQTN FVDYLSANMT TKLGIDFTVT VLTTGFWPSY
501: KTTDLNLPTE MVNCVEAFKV FYGTKTNSRR LSWIYSLGTC HILGKFEKKT MELVVSTYQA AVLLLFNNAE RLSYTEISEQ LNLSHEDLVR LLHSLSCLKY
601: KILIKEPMSR TISKTDTFEF NSKFTDKMRK IRVPLPPMDE RKKVVEDVDK DRRYAIDAAL VRIMKSRKVL AHQQLVSECV EHLSKMFKPD IKMIKKRIED
701: LINRDYLERD TENANTFKYV A
Arabidopsis Description
Putative cullin-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P0CH31]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.