Factsheet for Bra034597.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51951	Canola	cytosol	98.91	98.1
Bra032576.1-P	Field mustard	cytosol	86.59	85.77
PGSC0003DMT400013645	Potato	cytosol	8.34	78.21
Bra033362.1-P	Field mustard	cytosol	70.31	71.79
Bra000874.1-P	Field mustard	cytosol	71.27	70.6
AT1G02980.1	Thale cress	cytosol	66.76	65.77
AT1G43140.1	Thale cress	cytosol	64.71	65.6
Bra033363.1-P	Field mustard	cytosol	68.67	64.52
Bra018706.1-P	Field mustard	cytosol	52.67	57.04
Bra032570.1-P	Field mustard	cytosol	53.21	55.89
Bra028442.1-P	Field mustard	cytosol	53.63	55.76
Solyc06g008710.1.1	Tomato	cytosol	55.13	54.24
Bra036257.1-P	Field mustard	cytosol, nucleus, peroxisome	71.41	52.94
Bra024680.1-P	Field mustard	cytosol	31.74	31.69
Bra016291.1-P	Field mustard	cytosol	31.74	31.69
Bra025031.1-P	Field mustard	cytosol	29.55	28.42
Bra022023.1-P	Field mustard	plastid	29.82	27.77
Bra017569.1-P	Field mustard	plastid	29.82	27.74

Protein Annotations

Gene3D:1.10.10.10	Gene3D:1.10.10.2620	Gene3D:1.20.1310.10	MapMan:19.2.2.8.1.2	EnsemblPlantsGene:Bra034597	EnsemblPlants:Bra034597.1
EnsemblPlants:Bra034597.1-P	InterPro:Cullin_N	InterPro:Cullin_homology	InterPro:Cullin_homology_sf	InterPro:Cullin_neddylation_domain	InterPro:Cullin_repeat-like_dom_sf
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0019538	GO:GO:0031625	InterPro:IPR016158	InterPro:IPR036388
UniProt:M4F0K2	PFAM:PF00888	PFAM:PF10557	PFscan:PS50069	PANTHER:PTHR11932	PANTHER:PTHR11932:SF97
SMART:SM00182	SMART:SM00884	SUPFAM:SSF46785	SUPFAM:SSF74788	SUPFAM:SSF75632	UniParc:UPI000254658C
InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg	:	:	:

Description

AT4G02570 (E=7e-295) ATCUL1, CUL1, AXR6 | ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1); protein binding

Coordinates

chrA08:+:12603232..12606144

Molecular Weight (calculated)

85213.3 Da

IEP (calculated)

7.305

GRAVY (calculated)

-0.498

Length

731 amino acids

Sequence
(BLAST)

001: MDQGFELIDA AVTKLKRILE GKPEPAFGSH EYIENYTIVY NMCTQKPPDD LSQQLYDKYG GIFEDYDKHT MLPSIMEKHD EYMLRELSRM WDINKIMVRW
101: LSHFFFYLDR YFITRRSLPS LTEVGMTCFR DHVYNNVHFN VKQVIIALIH KEREGQQVDS ALLKNILDLF VQSGKGSMER YEDDFEKFFL QETASYYSRR
201: SSSWILEDSC PEYMIKSEES LKKEKERVTH YLHSTTEPKL VEVVQTRLLV LVAKQLLEKE SSGCSALLRD DKIDDLSRMY RLYHEIPKGL EPVAKAFRLH
301: VTSEGNGLIK QAEDAATSGS VEEQVLVRKI IDLHDKYMAY VMDCFQNHTL FHKALKEAFE IFCNKKVAGS SSAELLATFC DNLFKKAGND KSNDDSTIES
401: TIDNVVKLLD YISDKDLFAE FYRKKQARRL LFGKFNDEHE RSILTKLKGQ FGGQFTSKME GMVTDMQLAK DQQTGFEEHI KNGNTGKPKG VDFTVNVLTT
501: GFWPSYKTSD LNLPLEMVNC IESFKAYYET KTKHRRLMWI YSLGICHLNG RFDPKPIELI VSTYQAAVLC AFNNTERLTY QELFEQLNLS HEDLVRVLHS
601: LSCAKYKFLK KEPASKTISK TDSFEFNSKF TDKMRKCGES RYVPLPPVDD RKKVVEDVDK DRRYAIDASL VRIMKSRKVL PHQQLVSECV EQLSRMFKPD
701: IKMIKKRIED LISRDYLERD IENPNTFKYV A

Best Arabidopsis Sequence Match ( AT4G02570.4 )
(BLAST)

001: MERKTIDLEQ GWDYMQTGIT KLKRILEGLN EPAFDSEQYM MLYTTIYNMC TQKPPHDYSQ QLYDKYREAF EEYINSTVLP ALREKHDEFM LRELFKRWSN
101: HKVMVRWLSR FFYYLDRYFI ARRSLPPLNE VGLTCFRDLV YNELHSKVKQ AVIALVDKER EGEQIDRALL KNVLDIYVEI GMGQMERYEE DFESFMLQDT
201: SSYYSRKASS WIQEDSCPDY MLKSEECLKK ERERVAHYLH SSSEPKLVEK VQHELLVVFA SQLLEKEHSG CRALLRDDKV DDLSRMYRLY HKILRGLEPV
301: ANIFKQHVTA EGNALVQQAE DTATNQVANT ASVQEQVLIR KVIELHDKYM VYVTECFQNH TLFHKALKEA FEIFCNKTVA GSSSAELLAT FCDNILKKGG
401: SEKLSDEAIE DTLEKVVKLL AYISDKDLFA EFYRKKLARR LLFDRSANDD HERSILTKLK QQCGGQFTSK MEGMVTDLTL ARENQNSFED YLGSNPAANP
501: GIDLTVTVLT TGFWPSYKSF DINLPSEMIK CVEVFKGFYE TKTKHRKLTW IYSLGTCHIN GKFDQKAIEL IVSTYQAAVL LLFNTTDKLS YTEILAQLNL
601: SHEDLVRLLH SLSCAKYKIL LKEPNTKTVS QNDAFEFNSK FTDRMRRIKI PLPPVDERKK VVEDVDKDRR YAIDAAIVRI MKSRKVLGHQ QLVSECVEQL
701: SRMFKPDIKA IKKRMEDLIT RDYLERDKEN PNMFRYLA

Arabidopsis Description

CUL1AT4G02570 protein [Source:UniProtKB/TrEMBL;Acc:B9DGE3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.