Factsheet for Bra033362.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89926	Canola	cytosol	98.74	98.33
PGSC0003DMT400013645	Potato	cytosol	7.96	73.08
Bra033363.1-P	Field mustard	cytosol	78.49	72.24
Bra034597.1-P	Field mustard	cytosol	71.79	70.31
Bra032576.1-P	Field mustard	cytosol	70.53	68.43
Bra000874.1-P	Field mustard	cytosol	68.3	66.26
AT1G43140.1	Thale cress	cytosol	62.85	62.41
AT1G02980.1	Thale cress	cytosol	64.39	62.13
Bra018706.1-P	Field mustard	cytosol	51.82	54.96
Bra028442.1-P	Field mustard	cytosol	51.96	52.92
Bra032570.1-P	Field mustard	cytosol	50.84	52.3
Solyc06g008710.1.1	Tomato	cytosol	53.21	51.28
Bra036257.1-P	Field mustard	cytosol, nucleus, peroxisome	67.88	49.29
Bra016291.1-P	Field mustard	cytosol	31.98	31.28
Bra024680.1-P	Field mustard	cytosol	31.84	31.15
Bra025031.1-P	Field mustard	cytosol	29.89	28.16
Bra022023.1-P	Field mustard	plastid	30.45	27.77
Bra017569.1-P	Field mustard	plastid	30.17	27.48

Protein Annotations

Gene3D:1.10.10.10	Gene3D:1.10.10.2620	Gene3D:1.20.1310.10	MapMan:19.2.2.8.1.2	EnsemblPlantsGene:Bra033362	EnsemblPlants:Bra033362.1
EnsemblPlants:Bra033362.1-P	InterPro:Cullin_N	InterPro:Cullin_homology	InterPro:Cullin_homology_sf	InterPro:Cullin_neddylation_domain	InterPro:Cullin_repeat-like_dom_sf
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0019538	GO:GO:0031625	InterPro:IPR016158	InterPro:IPR036388
UniProt:M4EX27	PFAM:PF00888	PFAM:PF10557	PFscan:PS50069	PANTHER:PTHR11932	PANTHER:PTHR11932:SF97
SMART:SM00182	SMART:SM00884	SUPFAM:SSF46785	SUPFAM:SSF74788	SUPFAM:SSF75632	UniParc:UPI0002544BDB
InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	SEG:seg	:	:	:

Description

AT4G02570 (E=1e-256) ATCUL1, CUL1, AXR6 | ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1); protein binding

Coordinates

chrA10:-:4067996..4070820

Molecular Weight (calculated)

83678.8 Da

IEP (calculated)

7.041

GRAVY (calculated)

-0.441

Length

716 amino acids

Sequence
(BLAST)

001: MCSDTIIEYE QGCRFLETGV SKLTRILEEE TSEKPFTREQ YLEYYTTIYN MCIQENPHNY SQRLYHKYHD IVEHYANETV LPCIQQKDAV YLLRELSRKW
101: DHYKVFVKWL SHFFTYLERS FISYRNYPSL LEVAMKSFRD LVYLEINKER EGGEIERELL KNIVDIFVQS GMGTMEMYEK DFEMFLLEDT ASYYSRKASS
201: WIQEDSCPEY MIKSEESLKK EKERVTHYLH STTEPKLVEI VQEKLLVSVA KQLLEKEHLC ALLRDDKMDD LSRMYRLFNP IPNGLELVAK AFRLHVTSEG
301: NALIKQAQDS ATTGSVEGQV LVGKIIDLHD KYMVYVTDCF KNHTLFHKAL KEAFEIFCNK KVGGSSSAEL LATFCDNLFK KSGKSDEAIE AEIDNVVKLL
401: DYISDKDLFA EFYRKKLARR LLFDRKVNDE HERSMLTKLK GQHGGQFTSK MEGMLTDMAL AKENQKGFEG YVNGKPGGID LAVTILNTGF WPSYKTSTDL
501: NLPREMVECV DAFNSYYGSK TTKRKLSWTY SLGTCHVIGR FDHKPIELVL FTYQAVVLCL FNNTERLTYQ EIIEQLNLSH EDLVRVLHSL SCSKYKILNK
601: EPASKSISTT DVFELNTMFT DKMRRIKVPL PPVDDRKKVV EDVDKDRSYA IDACIVRIMK SRKVLLHQQL VSECVEQLRR MFKPDVKMIK KRIEELISRE
701: YLERDTKNPN TFKYVA

Best Arabidopsis Sequence Match ( AT1G02980.2 )
(BLAST)

001: MAKKDSVLEA GWSVMEAGVA KLQKILEEVP DEPPFDPVQR MQLYTTVHNL CTQKPPNDYS QQIYDRYGGV YVDYNKQTVL PAIREKHGEY MLRELVKRWA
101: NQKILVRWLS HFFEYLDRFY TRRGSHPTLS AVGFISFRDL VYQELQSKAK DAVLALIHKE REGEQIDRAL LKNVIDVYCG NGMGELVKYE EDFESFLLED
201: SASYYSRNAS RWNQENSCPD YMIKAEESLR LEKERVTNYL HSTTEPKLVA KVQNELLVVV AKQLIENEHS GCRALLRDDK MDDLARMYRL YHPIPQGLDP
301: VADLFKQHIT VEGSALIKQA TEAATDKAAS TSGLKVQDQV LIRQLIDLHD KFMVYVDECF QKHSLFHKAL KEAFEVFCNK TVAGVSSAEI LATYCDNILK
401: TGGGIEKLEN EDLELTLEKV VKLLVYISDK DLFAEFFRKK QARRLLFDRN GNDYHERSLL TKFKELLGAQ FTSKMEGMLT DMTLAKEHQT NFVEFLSVNK
501: TKKLGMDFTV TVLTTGFWPS YKTTDLNLPI EMVNCVEAFK AYYGTKTNSR RLSWIYSLGT CQLAGKFDKK TIEIVVTTYQ AAVLLLFNNT ERLSYTEILE
601: QLNLGHEDLA RLLHSLSCLK YKILIKEPMS RNISNTDTFE FNSKFTDKMR RIRVPLPPMD ERKKIVEDVD KDRRYAIDAA LVRIMKSRKV LGHQQLVSEC
701: VEHLSKMFKP DIKMIKKRIE DLISRDYLER DTDNPNTFKY LA

Arabidopsis Description

CUL2Cullin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRZ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.